RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
TRAF3-201ENST00000347662 C14orf37Q86TY3 774 aa15.73■□□□□ 0.11
TRAF3-201ENST00000347662 TRIM44Q96DX7 344 aaPredicted RBP15.71■□□□□ 0.11
TRAF3-201ENST00000347662 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
TRAF3-201ENST00000347662 AMER1Q5JTC6 1135 aaPredicted RBP15.71■□□□□ 0.11
TRAF3-201ENST00000347662 MYH16Q9H6N6 1097 aa15.71■□□□□ 0.11
TRAF3-201ENST00000347662 DNTTIP2Q5QJE6 756 aaKnown RBP15.7■□□□□ 0.1
TRAF3-201ENST00000347662 NPHP1O15259 732 aa15.7■□□□□ 0.1
TRAF3-201ENST00000347662 MTUS2Q5JR59 1369 aa15.68■□□□□ 0.1
TRAF3-201ENST00000347662 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.68■□□□□ 0.1
TRAF3-201ENST00000347662 PTMAP06454 111 aaKnown RBP15.67■□□□□ 0.1
TRAF3-201ENST00000347662 HAP1P54257 671 aaPredicted RBP15.66■□□□□ 0.1
TRAF3-201ENST00000347662 TONSLQ96HA7 1378 aa15.66■□□□□ 0.1
TRAF3-201ENST00000347662 PPP1R15AO75807 674 aaPredicted RBP15.62■□□□□ 0.09
TRAF3-201ENST00000347662 PLEKHD1A6NEE1 506 aa15.61■□□□□ 0.09
TRAF3-201ENST00000347662 FKBP8Q14318 412 aa15.61■□□□□ 0.09
TRAF3-201ENST00000347662 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
TRAF3-201ENST00000347662 RRP7BPQ9NSQ0 103 aa15.6■□□□□ 0.09
TRAF3-201ENST00000347662 FAM9BQ8IZU0 186 aa15.6■□□□□ 0.09
TRAF3-201ENST00000347662 PLCB2Q00722 1185 aa15.55■□□□□ 0.08
TRAF3-201ENST00000347662 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
TRAF3-201ENST00000347662 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
TRAF3-201ENST00000347662 CCDC136Q96JN2 1154 aa15.54■□□□□ 0.08
TRAF3-201ENST00000347662 NACADO15069 1562 aa15.53■□□□□ 0.08
TRAF3-201ENST00000347662 GOLGA6L22H0YM25 854 aa15.51■□□□□ 0.07
TRAF3-201ENST00000347662 DDX10Q13206 875 aaKnown RBP15.51■□□□□ 0.07
TRAF3-201ENST00000347662 HNRNPUQ00839 825 aaKnown RBP eCLIP15.5■□□□□ 0.07
TRAF3-201ENST00000347662 HIRIP3Q9BW71 556 aaPredicted RBP15.5■□□□□ 0.07
TRAF3-201ENST00000347662 NAP1L2Q9ULW6 460 aaPredicted RBP15.49■□□□□ 0.07
TRAF3-201ENST00000347662 ISY1Q9ULR0 285 aaKnown RBP15.49■□□□□ 0.07
TRAF3-201ENST00000347662 MLECQ14165 292 aa15.48■□□□□ 0.07
TRAF3-201ENST00000347662 TMC1Q8TDI8 760 aa15.46■□□□□ 0.07
TRAF3-201ENST00000347662 CLIP1P30622 1438 aa15.46■□□□□ 0.06
TRAF3-201ENST00000347662 CFDP1Q9UEE9 299 aaPredicted RBP15.46■□□□□ 0.06
TRAF3-201ENST00000347662 KRI1Q8N9T8 703 aaKnown RBP15.45■□□□□ 0.06
TRAF3-201ENST00000347662 GOLGA6L6A8MZA4 724 aa15.45■□□□□ 0.06
TRAF3-201ENST00000347662 GOLGA2Q08379 1002 aa15.45■□□□□ 0.06
TRAF3-201ENST00000347662 LMOD2Q6P5Q4 547 aa15.45■□□□□ 0.06
TRAF3-201ENST00000347662 BECN1Q14457 450 aa15.44■□□□□ 0.06
TRAF3-201ENST00000347662 CASC1Q6TDU7 716 aa15.43■□□□□ 0.06
TRAF3-201ENST00000347662 NAP1L5Q96NT1 182 aaPredicted RBP15.43■□□□□ 0.06
TRAF3-201ENST00000347662 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
TRAF3-201ENST00000347662 PDE4CQ08493 712 aa15.41■□□□□ 0.06
TRAF3-201ENST00000347662 FGD1P98174 961 aa15.41■□□□□ 0.06
TRAF3-201ENST00000347662 WRNQ14191 1432 aaPredicted RBP eCLIP15.4■□□□□ 0.06
TRAF3-201ENST00000347662 NOC3LQ8WTT2 800 aaKnown RBP15.4■□□□□ 0.06
TRAF3-201ENST00000347662 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
TRAF3-201ENST00000347662 FBXO3Q9UK99 471 aa15.38■□□□□ 0.05
TRAF3-201ENST00000347662 KIF27Q86VH2 1401 aa15.36■□□□□ 0.05
TRAF3-201ENST00000347662 IRX6P78412 446 aaPredicted RBP15.35■□□□□ 0.05
TRAF3-201ENST00000347662 EIF4G1Q04637 1599 aaKnown RBP15.34■□□□□ 0.05
TRAF3-201ENST00000347662 PNNQ9H307 717 aaKnown RBP15.34■□□□□ 0.05
TRAF3-201ENST00000347662 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
TRAF3-201ENST00000347662 ANO8Q9HCE9 1232 aaPredicted RBP15.34■□□□□ 0.05
TRAF3-201ENST00000347662 SENP3-EIF4A1A0A087X0R7 540 aa15.34■□□□□ 0.05
TRAF3-201ENST00000347662 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
TRAF3-201ENST00000347662 NRDCO43847 1150 aa15.32■□□□□ 0.04
TRAF3-201ENST00000347662 KIAA2012Q0VF49 1180 aa15.32■□□□□ 0.04
TRAF3-201ENST00000347662 LAS1LQ9Y4W2 734 aaKnown RBP15.31■□□□□ 0.04
TRAF3-201ENST00000347662 DDRGK1Q96HY6 314 aa15.31■□□□□ 0.04
TRAF3-201ENST00000347662 OS9Q13438 667 aaPredicted RBP15.31■□□□□ 0.04
TRAF3-201ENST00000347662 KCNJ4P48050 445 aa15.31■□□□□ 0.04
TRAF3-201ENST00000347662 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
TRAF3-201ENST00000347662 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
TRAF3-201ENST00000347662 DRC7Q8IY82 874 aa15.29■□□□□ 0.04
TRAF3-201ENST00000347662 MRS2Q9HD23 443 aa15.28■□□□□ 0.04
TRAF3-201ENST00000347662 RTN4Q9NQC3 1192 aaKnown RBP15.28■□□□□ 0.04
TRAF3-201ENST00000347662 L1TD1Q5T7N2 865 aaKnown RBP15.27■□□□□ 0.03
TRAF3-201ENST00000347662 GOLGA3Q08378 1498 aa15.27■□□□□ 0.03
TRAF3-201ENST00000347662 POGKQ9P215 609 aa15.27■□□□□ 0.03
TRAF3-201ENST00000347662 A0A0U1RQG5 324 aaPredicted RBP15.27■□□□□ 0.03
TRAF3-201ENST00000347662 CHAF1AQ13111 956 aaPredicted RBP15.25■□□□□ 0.03
TRAF3-201ENST00000347662 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
TRAF3-201ENST00000347662 EIF4G2P78344 907 aaKnown RBP eCLIP15.24■□□□□ 0.036e-8■■■■□ 21.2
TRAF3-201ENST00000347662 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
TRAF3-201ENST00000347662 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
TRAF3-201ENST00000347662 GOLGA6L4A6NEF3 574 aa15.24■□□□□ 0.03
TRAF3-201ENST00000347662 CEP162Q5TB80 1403 aa15.24■□□□□ 0.03
TRAF3-201ENST00000347662 GGT6Q6P531 493 aa15.24■□□□□ 0.03
TRAF3-201ENST00000347662 CUX2O14529 1486 aa15.23■□□□□ 0.03
TRAF3-201ENST00000347662 SOX12O15370 315 aa15.22■□□□□ 0.03
TRAF3-201ENST00000347662 GNL2Q13823 731 aaKnown RBP15.21■□□□□ 0.03
TRAF3-201ENST00000347662 HSP90AB1P08238 724 aaKnown RBP15.2■□□□□ 0.02
TRAF3-201ENST00000347662 SAFB2Q14151 953 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRAF3-201ENST00000347662 CARMIL1Q5VZK9 1371 aa15.17■□□□□ 0.02
TRAF3-201ENST00000347662 TDRD9Q8NDG6 1382 aaKnown RBP15.17■□□□□ 0.02
TRAF3-201ENST00000347662 CARD11Q9BXL7 1154 aa15.17■□□□□ 0.02
TRAF3-201ENST00000347662 ARID3AQ99856 593 aa15.16■□□□□ 0.02
TRAF3-201ENST00000347662 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
TRAF3-201ENST00000347662 CCNB3Q8WWL7 1395 aa15.16■□□□□ 0.02
TRAF3-201ENST00000347662 NEUROD2Q15784 382 aa15.15■□□□□ 0.02
TRAF3-201ENST00000347662 EEA1Q15075 1411 aa15.15■□□□□ 0.02
TRAF3-201ENST00000347662 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
TRAF3-201ENST00000347662 TNNT3P45378 269 aaPredicted RBP15.13■□□□□ 0.01
TRAF3-201ENST00000347662 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
TRAF3-201ENST00000347662 WWC1Q8IX03 1113 aa15.13■□□□□ 0.01
TRAF3-201ENST00000347662 CEP164Q9UPV0 1460 aa15.12■□□□□ 0.01
TRAF3-201ENST00000347662 STK26Q9P289 416 aa15.11■□□□□ 0.01
TRAF3-201ENST00000347662 MSNP26038 577 aaKnown RBP15.11■□□□□ 0.01
TRAF3-201ENST00000347662 CFAP53Q96M91 514 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms