RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 CHGAP10645 457 aaKnown RBP8.78□□□□□ -1
PCDH18-201ENST00000344876 SENP3Q9H4L4 574 aaPredicted RBP8.78□□□□□ -1
PCDH18-201ENST00000344876 ERICH6BQ5W0A0 696 aa8.77□□□□□ -1.01
PCDH18-201ENST00000344876 ZNF526Q8TF50 670 aaPredicted RBP8.76□□□□□ -1.01
PCDH18-201ENST00000344876 MIER1Q8N108 512 aa8.75□□□□□ -1.01
PCDH18-201ENST00000344876 PLEKHG5O94827 1062 aa8.75□□□□□ -1.01
PCDH18-201ENST00000344876 TMC1Q8TDI8 760 aa8.74□□□□□ -1.01
PCDH18-201ENST00000344876 ARID3AQ99856 593 aa8.74□□□□□ -1.01
PCDH18-201ENST00000344876 HMGB1P09429 215 aaKnown RBP8.74□□□□□ -1.01
PCDH18-201ENST00000344876 TNNT3P45378 269 aaPredicted RBP8.73□□□□□ -1.01
PCDH18-201ENST00000344876 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.72□□□□□ -1.01
PCDH18-201ENST00000344876 LAS1LQ9Y4W2 734 aaKnown RBP8.72□□□□□ -1.01
PCDH18-201ENST00000344876 MRS2Q9HD23 443 aa8.72□□□□□ -1.01
PCDH18-201ENST00000344876 NCBP3Q53F19 620 aaKnown RBP8.71□□□□□ -1.01
PCDH18-201ENST00000344876 DEKP35659 375 aaKnown RBP8.71□□□□□ -1.02
PCDH18-201ENST00000344876 PABPN1Q86U42 306 aaKnown RBP eCLIP8.71□□□□□ -1.02
PCDH18-201ENST00000344876 TONSLQ96HA7 1378 aa8.7□□□□□ -1.02
PCDH18-201ENST00000344876 DNTTIP2Q5QJE6 756 aaKnown RBP8.7□□□□□ -1.02
PCDH18-201ENST00000344876 TAOK2Q9UL54 1235 aa8.7□□□□□ -1.02
PCDH18-201ENST00000344876 A0A0G2JS52 829 aa8.7□□□□□ -1.02
PCDH18-201ENST00000344876 KDM2AQ9Y2K7 1162 aa8.69□□□□□ -1.02
PCDH18-201ENST00000344876 CHIC2Q9UKJ5 165 aa8.69□□□□□ -1.02
PCDH18-201ENST00000344876 PTMAP06454 111 aaKnown RBP8.68□□□□□ -1.02
PCDH18-201ENST00000344876 PDIA4P13667 645 aaKnown RBP8.68□□□□□ -1.02
PCDH18-201ENST00000344876 WDR43Q15061 677 aaKnown RBP eCLIP8.67□□□□□ -1.02
PCDH18-201ENST00000344876 STAG3Q9UJ98 1225 aa8.67□□□□□ -1.02
PCDH18-201ENST00000344876 PLCB2Q00722 1185 aa8.66□□□□□ -1.02
PCDH18-201ENST00000344876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.66□□□□□ -1.02
PCDH18-201ENST00000344876 PATL2C9JE40 543 aaKnown RBP8.66□□□□□ -1.02
PCDH18-201ENST00000344876 ZBTB7CA1YPR0 619 aa8.65□□□□□ -1.02
PCDH18-201ENST00000344876 SUPT16HQ9Y5B9 1047 aaKnown RBP8.63□□□□□ -1.03
PCDH18-201ENST00000344876 BECN1Q14457 450 aa8.62□□□□□ -1.03
PCDH18-201ENST00000344876 MYH16Q9H6N6 1097 aa8.61□□□□□ -1.03
PCDH18-201ENST00000344876 CCDC9Q9Y3X0 531 aaKnown RBP8.61□□□□□ -1.03
PCDH18-201ENST00000344876 DDRGK1Q96HY6 314 aa8.6□□□□□ -1.03
PCDH18-201ENST00000344876 RGS3P49796 1198 aa8.6□□□□□ -1.03
PCDH18-201ENST00000344876 HSP90AA2PQ14568 343 aaPredicted RBP8.59□□□□□ -1.03
PCDH18-201ENST00000344876 ESF1Q9H501 851 aaKnown RBP8.59□□□□□ -1.03
PCDH18-201ENST00000344876 GOLGA6L22H0YM25 854 aa8.59□□□□□ -1.03
PCDH18-201ENST00000344876 CSRNP3Q8WYN3 585 aa8.59□□□□□ -1.03
PCDH18-201ENST00000344876 SPRYD3Q8NCJ5 442 aa8.58□□□□□ -1.04
PCDH18-201ENST00000344876 TAF7LQ5H9L4 462 aa8.58□□□□□ -1.04
PCDH18-201ENST00000344876 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
PCDH18-201ENST00000344876 ZRSR1Q15695 479 aaKnown RBP8.56□□□□□ -1.04
PCDH18-201ENST00000344876 RSPH6AQ9H0K4 717 aa8.55□□□□□ -1.04
PCDH18-201ENST00000344876 B4GALNT3Q6L9W6 998 aa8.55□□□□□ -1.04
PCDH18-201ENST00000344876 NOP58Q9Y2X3 529 aaKnown RBP8.55□□□□□ -1.04
PCDH18-201ENST00000344876 MEX3CQ5U5Q3 659 aaKnown RBP8.54□□□□□ -1.04
PCDH18-201ENST00000344876 PPM1GO15355 546 aaPredicted RBP8.53□□□□□ -1.04
PCDH18-201ENST00000344876 HSP90B1P14625 803 aaKnown RBP8.52□□□□□ -1.04
PCDH18-201ENST00000344876 STK11IPQ8N1F8 1099 aa8.52□□□□□ -1.05
PCDH18-201ENST00000344876 FRAT1Q92837 279 aaPredicted RBP8.52□□□□□ -1.05
PCDH18-201ENST00000344876 ANO8Q9HCE9 1232 aaPredicted RBP8.51□□□□□ -1.05
PCDH18-201ENST00000344876 RGL3Q3MIN7 710 aa8.5□□□□□ -1.05
PCDH18-201ENST00000344876 NAP1L2Q9ULW6 460 aaPredicted RBP8.5□□□□□ -1.05
PCDH18-201ENST00000344876 FTSJ3Q8IY81 847 aaKnown RBP8.5□□□□□ -1.05
PCDH18-201ENST00000344876 UBE2Q2Q8WVN8 375 aa8.5□□□□□ -1.05
PCDH18-201ENST00000344876 RRP7BPQ9NSQ0 103 aa8.5□□□□□ -1.05
PCDH18-201ENST00000344876 HSP90AB1P08238 724 aaKnown RBP8.49□□□□□ -1.05
PCDH18-201ENST00000344876 EIF4G2P78344 907 aaKnown RBP eCLIP8.49□□□□□ -1.05
PCDH18-201ENST00000344876 USP35Q9P2H5 1018 aa8.49□□□□□ -1.05
PCDH18-201ENST00000344876 GZF1Q9H116 711 aaPredicted RBP8.47□□□□□ -1.05
PCDH18-201ENST00000344876 NEFHP12036 1026 aa8.47□□□□□ -1.05
PCDH18-201ENST00000344876 PAXIP1Q6ZW49 1069 aaPredicted RBP8.47□□□□□ -1.05
PCDH18-201ENST00000344876 KLHL34Q8N239 644 aa8.46□□□□□ -1.06
PCDH18-201ENST00000344876 CASC1Q6TDU7 716 aa8.45□□□□□ -1.06
PCDH18-201ENST00000344876 MSNP26038 577 aaKnown RBP8.45□□□□□ -1.06
PCDH18-201ENST00000344876 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
PCDH18-201ENST00000344876 FGD1P98174 961 aa8.45□□□□□ -1.06
PCDH18-201ENST00000344876 PPP4R2Q9NY27 417 aa8.44□□□□□ -1.06
PCDH18-201ENST00000344876 BRD2P25440 801 aaKnown RBP8.44□□□□□ -1.06
PCDH18-201ENST00000344876 DRC7Q8IY82 874 aa8.44□□□□□ -1.06
PCDH18-201ENST00000344876 RBM19Q9Y4C8 960 aaKnown RBP8.44□□□□□ -1.06
PCDH18-201ENST00000344876 CC2D1BQ5T0F9 858 aaKnown RBP8.43□□□□□ -1.06
PCDH18-201ENST00000344876 KCNJ4P48050 445 aa8.42□□□□□ -1.06
PCDH18-201ENST00000344876 PNNQ9H307 717 aaKnown RBP8.42□□□□□ -1.06
PCDH18-201ENST00000344876 CHAF1AQ13111 956 aaPredicted RBP8.41□□□□□ -1.06
PCDH18-201ENST00000344876 CLSTN1O94985 981 aa8.41□□□□□ -1.06
PCDH18-201ENST00000344876 TSPY4P0CV99 314 aa8.41□□□□□ -1.06
PCDH18-201ENST00000344876 TSPY10P0CW01 314 aa8.41□□□□□ -1.06
PCDH18-201ENST00000344876 GOLGA6L4A6NEF3 574 aa8.41□□□□□ -1.06
PCDH18-201ENST00000344876 APBB1O00213 710 aa8.41□□□□□ -1.06
PCDH18-201ENST00000344876 SETQ01105 290 aaPredicted RBP8.41□□□□□ -1.06
PCDH18-201ENST00000344876 OS9Q13438 667 aaPredicted RBP8.41□□□□□ -1.06
PCDH18-201ENST00000344876 SLKQ9H2G2 1235 aaPredicted RBP8.41□□□□□ -1.06
PCDH18-201ENST00000344876 ABCC9O60706 1549 aa8.4□□□□□ -1.06
PCDH18-201ENST00000344876 KNSTRNQ9Y448 316 aa8.4□□□□□ -1.06
PCDH18-201ENST00000344876 SIN3AQ96ST3 1273 aa8.4□□□□□ -1.07
PCDH18-201ENST00000344876 GOLGA6L6A8MZA4 724 aa8.39□□□□□ -1.07
PCDH18-201ENST00000344876 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
PCDH18-201ENST00000344876 HSCBQ8IWL3 235 aa8.39□□□□□ -1.07
PCDH18-201ENST00000344876 LMOD2Q6P5Q4 547 aa8.39□□□□□ -1.07
PCDH18-201ENST00000344876 PPP1R15AO75807 674 aaPredicted RBP8.38□□□□□ -1.07
PCDH18-201ENST00000344876 U2SURPO15042 1029 aaKnown RBP8.38□□□□□ -1.07
PCDH18-201ENST00000344876 CFAP53Q96M91 514 aa8.38□□□□□ -1.07
PCDH18-201ENST00000344876 SOX12O15370 315 aa8.37□□□□□ -1.07
PCDH18-201ENST00000344876 PSMD1Q99460 953 aa8.37□□□□□ -1.07
PCDH18-201ENST00000344876 WWC1Q8IX03 1113 aa8.37□□□□□ -1.07
PCDH18-201ENST00000344876 KCNH8Q96L42 1107 aa8.37□□□□□ -1.07
PCDH18-201ENST00000344876 NPM1P06748 294 aaKnown RBP eCLIP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms