RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
TRIOBP-202ENST00000344404 IRX6P78412 446 aaPredicted RBP16.4■□□□□ 0.22
TRIOBP-202ENST00000344404 WDR43Q15061 677 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRIOBP-202ENST00000344404 HIRIP3Q9BW71 556 aaPredicted RBP16.37■□□□□ 0.21
TRIOBP-202ENST00000344404 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
TRIOBP-202ENST00000344404 SOX12O15370 315 aa16.36■□□□□ 0.21
TRIOBP-202ENST00000344404 RGL3Q3MIN7 710 aa16.35■□□□□ 0.21
TRIOBP-202ENST00000344404 CLSTN1O94985 981 aa16.33■□□□□ 0.21
TRIOBP-202ENST00000344404 MYH16Q9H6N6 1097 aa16.32■□□□□ 0.2
TRIOBP-202ENST00000344404 TONSLQ96HA7 1378 aa16.32■□□□□ 0.2
TRIOBP-202ENST00000344404 LAS1LQ9Y4W2 734 aaKnown RBP16.3■□□□□ 0.2
TRIOBP-202ENST00000344404 GLIPR1L2Q4G1C9 344 aa16.3■□□□□ 0.2
TRIOBP-202ENST00000344404 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
TRIOBP-202ENST00000344404 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
TRIOBP-202ENST00000344404 TSPY4P0CV99 314 aa16.28■□□□□ 0.2
TRIOBP-202ENST00000344404 TSPY10P0CW01 314 aa16.28■□□□□ 0.2
TRIOBP-202ENST00000344404 NCLP19338 710 aaKnown RBP16.27■□□□□ 0.19
TRIOBP-202ENST00000344404 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
TRIOBP-202ENST00000344404 CCDC136Q96JN2 1154 aa16.26■□□□□ 0.19
TRIOBP-202ENST00000344404 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
TRIOBP-202ENST00000344404 RRP7BPQ9NSQ0 103 aa16.24■□□□□ 0.19
TRIOBP-202ENST00000344404 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
TRIOBP-202ENST00000344404 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
TRIOBP-202ENST00000344404 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
TRIOBP-202ENST00000344404 CCDC9Q9Y3X0 531 aaKnown RBP16.21■□□□□ 0.19
TRIOBP-202ENST00000344404 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
TRIOBP-202ENST00000344404 NAP1L2Q9ULW6 460 aaPredicted RBP16.19■□□□□ 0.18
TRIOBP-202ENST00000344404 ISY1Q9ULR0 285 aaKnown RBP16.18■□□□□ 0.18
TRIOBP-202ENST00000344404 PRM3Q9NNZ6 103 aa16.16■□□□□ 0.18
TRIOBP-202ENST00000344404 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
TRIOBP-202ENST00000344404 DNTTIP2Q5QJE6 756 aaKnown RBP16.14■□□□□ 0.17
TRIOBP-202ENST00000344404 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.17
TRIOBP-202ENST00000344404 SAFB2Q14151 953 aaKnown RBP eCLIP16.13■□□□□ 0.17
TRIOBP-202ENST00000344404 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
TRIOBP-202ENST00000344404 PLCB2Q00722 1185 aa16.12■□□□□ 0.17
TRIOBP-202ENST00000344404 TRIM44Q96DX7 344 aaPredicted RBP16.12■□□□□ 0.17
TRIOBP-202ENST00000344404 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
TRIOBP-202ENST00000344404 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
TRIOBP-202ENST00000344404 POGKQ9P215 609 aa16.11■□□□□ 0.17
TRIOBP-202ENST00000344404 MTUS2Q5JR59 1369 aa16.08■□□□□ 0.17
TRIOBP-202ENST00000344404 PAK3O75914 559 aaPredicted RBP16.08■□□□□ 0.16
TRIOBP-202ENST00000344404 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
TRIOBP-202ENST00000344404 OS9Q13438 667 aaPredicted RBP16.06■□□□□ 0.16
TRIOBP-202ENST00000344404 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
TRIOBP-202ENST00000344404 PLEKHD1A6NEE1 506 aa16.04■□□□□ 0.16
TRIOBP-202ENST00000344404 ANO8Q9HCE9 1232 aaPredicted RBP16.03■□□□□ 0.16
TRIOBP-202ENST00000344404 FGD1P98174 961 aa16.02■□□□□ 0.15
TRIOBP-202ENST00000344404 FTSJ3Q8IY81 847 aaKnown RBP16.01■□□□□ 0.15
TRIOBP-202ENST00000344404 STK26Q9P289 416 aa16■□□□□ 0.15
TRIOBP-202ENST00000344404 PDE4CQ08493 712 aa16■□□□□ 0.15
TRIOBP-202ENST00000344404 CASC1Q6TDU7 716 aa15.98■□□□□ 0.15
TRIOBP-202ENST00000344404 GOLGA6L22H0YM25 854 aa15.97■□□□□ 0.15
TRIOBP-202ENST00000344404 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.15
TRIOBP-202ENST00000344404 KCNJ4P48050 445 aa15.96■□□□□ 0.15
TRIOBP-202ENST00000344404 BECN1Q14457 450 aa15.94■□□□□ 0.14
TRIOBP-202ENST00000344404 FRAT1Q92837 279 aaPredicted RBP15.94■□□□□ 0.14
TRIOBP-202ENST00000344404 CSB-PGBD3P0DP91 1061 aa15.94■□□□□ 0.14
TRIOBP-202ENST00000344404 KLHL34Q8N239 644 aa15.94■□□□□ 0.14
TRIOBP-202ENST00000344404 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
TRIOBP-202ENST00000344404 GGT6Q6P531 493 aa15.91■□□□□ 0.14
TRIOBP-202ENST00000344404 ERICH6BQ5W0A0 696 aa15.91■□□□□ 0.14
TRIOBP-202ENST00000344404 CC2D1BQ5T0F9 858 aaKnown RBP15.91■□□□□ 0.14
TRIOBP-202ENST00000344404 CFAP53Q96M91 514 aa15.91■□□□□ 0.14
TRIOBP-202ENST00000344404 MSH5O43196 834 aa15.9■□□□□ 0.14
TRIOBP-202ENST00000344404 MAPK8IP3Q9UPT6 1336 aa15.89■□□□□ 0.13
TRIOBP-202ENST00000344404 CFDP1Q9UEE9 299 aaPredicted RBP15.88■□□□□ 0.13
TRIOBP-202ENST00000344404 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
TRIOBP-202ENST00000344404 SRPK2P78362 688 aaKnown RBP15.88■□□□□ 0.13
TRIOBP-202ENST00000344404 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
TRIOBP-202ENST00000344404 RTN4Q9NQC3 1192 aaKnown RBP15.88■□□□□ 0.13
TRIOBP-202ENST00000344404 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
TRIOBP-202ENST00000344404 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
TRIOBP-202ENST00000344404 NUTM2FA1L443 756 aa15.87■□□□□ 0.13
TRIOBP-202ENST00000344404 RGS3P49796 1198 aa15.87■□□□□ 0.13
TRIOBP-202ENST00000344404 NAP1L5Q96NT1 182 aaPredicted RBP15.86■□□□□ 0.13
TRIOBP-202ENST00000344404 G3V3G9 751 aa15.85■□□□□ 0.13
TRIOBP-202ENST00000344404 DCAF8Q5TAQ9 597 aa15.85■□□□□ 0.13
TRIOBP-202ENST00000344404 APBB1O00213 710 aa15.85■□□□□ 0.13
TRIOBP-202ENST00000344404 MEX3CQ5U5Q3 659 aaKnown RBP15.84■□□□□ 0.13
TRIOBP-202ENST00000344404 GOLGA6L6A8MZA4 724 aa15.83■□□□□ 0.13
TRIOBP-202ENST00000344404 KRI1Q8N9T8 703 aaKnown RBP15.82■□□□□ 0.12
TRIOBP-202ENST00000344404 EIF4G2P78344 907 aaKnown RBP eCLIP15.82■□□□□ 0.12
TRIOBP-202ENST00000344404 TMX4Q9H1E5 349 aaPredicted RBP15.81■□□□□ 0.12
TRIOBP-202ENST00000344404 DDRGK1Q96HY6 314 aa15.81■□□□□ 0.12
TRIOBP-202ENST00000344404 HSP90AB1P08238 724 aaKnown RBP15.8■□□□□ 0.12
TRIOBP-202ENST00000344404 NOC3LQ8WTT2 800 aaKnown RBP15.79■□□□□ 0.12
TRIOBP-202ENST00000344404 DRC7Q8IY82 874 aa15.79■□□□□ 0.12
TRIOBP-202ENST00000344404 CARD11Q9BXL7 1154 aa15.79■□□□□ 0.12
TRIOBP-202ENST00000344404 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
TRIOBP-202ENST00000344404 GNL2Q13823 731 aaKnown RBP15.78■□□□□ 0.12
TRIOBP-202ENST00000344404 MIER1Q8N108 512 aa15.77■□□□□ 0.12
TRIOBP-202ENST00000344404 CHMP3Q9Y3E7 222 aa15.77■□□□□ 0.12
TRIOBP-202ENST00000344404 GOLGA6L4A6NEF3 574 aa15.76■□□□□ 0.11
TRIOBP-202ENST00000344404 PNNQ9H307 717 aaKnown RBP15.75■□□□□ 0.11
TRIOBP-202ENST00000344404 LTV1Q96GA3 475 aaPredicted RBP15.74■□□□□ 0.11
TRIOBP-202ENST00000344404 NUDCQ9Y266 331 aa15.74■□□□□ 0.11
TRIOBP-202ENST00000344404 WWC1Q8IX03 1113 aa15.73■□□□□ 0.11
TRIOBP-202ENST00000344404 ARID3AQ99856 593 aa15.73■□□□□ 0.11
TRIOBP-202ENST00000344404 SUPT16HQ9Y5B9 1047 aaKnown RBP15.72■□□□□ 0.11
TRIOBP-202ENST00000344404 KIAA2012Q0VF49 1180 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms