RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 PLEKHG5O94827 1062 aa18.24■□□□□ 0.51
PDE4D-203ENST00000340635 C14orf37Q86TY3 774 aa18.23■□□□□ 0.51
PDE4D-203ENST00000340635 ERICH6BQ5W0A0 696 aa18.22■□□□□ 0.51
PDE4D-203ENST00000340635 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
PDE4D-203ENST00000340635 PLCB2Q00722 1185 aa18.22■□□□□ 0.51
PDE4D-203ENST00000340635 NRDCO43847 1150 aa18.21■□□□□ 0.51
PDE4D-203ENST00000340635 NPHP1O15259 732 aa18.18■□□□□ 0.5
PDE4D-203ENST00000340635 P3H3Q8IVL6 736 aa18.16■□□□□ 0.5
PDE4D-203ENST00000340635 CHAF1AQ13111 956 aaPredicted RBP18.15■□□□□ 0.5
PDE4D-203ENST00000340635 PRM3Q9NNZ6 103 aa18.15■□□□□ 0.5
PDE4D-203ENST00000340635 HAP1P54257 671 aaPredicted RBP18.14■□□□□ 0.49
PDE4D-203ENST00000340635 L1TD1Q5T7N2 865 aaKnown RBP18.13■□□□□ 0.49
PDE4D-203ENST00000340635 DDX10Q13206 875 aaKnown RBP18.09■□□□□ 0.49
PDE4D-203ENST00000340635 FGD1P98174 961 aa18.09■□□□□ 0.49
PDE4D-203ENST00000340635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.48
PDE4D-203ENST00000340635 NPM1P06748 294 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDE4D-203ENST00000340635 NOC3LQ8WTT2 800 aaKnown RBP18.07■□□□□ 0.48
PDE4D-203ENST00000340635 NAP1L2Q9ULW6 460 aaPredicted RBP18.06■□□□□ 0.48
PDE4D-203ENST00000340635 IRX6P78412 446 aaPredicted RBP18.06■□□□□ 0.48
PDE4D-203ENST00000340635 MRS2Q9HD23 443 aa18.06■□□□□ 0.48
PDE4D-203ENST00000340635 KIAA2012Q0VF49 1180 aa18.05■□□□□ 0.48
PDE4D-203ENST00000340635 GOLGA2Q08379 1002 aa18.05■□□□□ 0.48
PDE4D-203ENST00000340635 PNNQ9H307 717 aaKnown RBP18.03■□□□□ 0.48
PDE4D-203ENST00000340635 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
PDE4D-203ENST00000340635 DRC7Q8IY82 874 aa18■□□□□ 0.47
PDE4D-203ENST00000340635 PPM1GO15355 546 aaPredicted RBP18■□□□□ 0.47
PDE4D-203ENST00000340635 RTN4Q9NQC3 1192 aaKnown RBP18■□□□□ 0.47
PDE4D-203ENST00000340635 GOLGA6L4A6NEF3 574 aa17.99■□□□□ 0.47
PDE4D-203ENST00000340635 KDM2AQ9Y2K7 1162 aa17.99■□□□□ 0.47
PDE4D-203ENST00000340635 KCNJ4P48050 445 aa17.98■□□□□ 0.47
PDE4D-203ENST00000340635 HSP90AB1P08238 724 aaKnown RBP17.97■□□□□ 0.47
PDE4D-203ENST00000340635 MSNP26038 577 aaKnown RBP17.97■□□□□ 0.47
PDE4D-203ENST00000340635 OS9Q13438 667 aaPredicted RBP17.96■□□□□ 0.47
PDE4D-203ENST00000340635 PPP1R15AO75807 674 aaPredicted RBP17.96■□□□□ 0.46
PDE4D-203ENST00000340635 ISY1Q9ULR0 285 aaKnown RBP17.94■□□□□ 0.46
PDE4D-203ENST00000340635 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
PDE4D-203ENST00000340635 TNNT3P45378 269 aaPredicted RBP17.92■□□□□ 0.46
PDE4D-203ENST00000340635 A0A0U1RQG5 324 aaPredicted RBP17.91■□□□□ 0.46
PDE4D-203ENST00000340635 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
PDE4D-203ENST00000340635 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
PDE4D-203ENST00000340635 GNL2Q13823 731 aaKnown RBP17.88■□□□□ 0.45
PDE4D-203ENST00000340635 GOLGA6L1Q8N7Z2 621 aa17.82■□□□□ 0.44
PDE4D-203ENST00000340635 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
PDE4D-203ENST00000340635 ARID4BQ4LE39 1312 aaPredicted RBP17.81■□□□□ 0.44
PDE4D-203ENST00000340635 PDE4CQ08493 712 aa17.8■□□□□ 0.44
PDE4D-203ENST00000340635 CHMP4BQ9H444 224 aaKnown RBP17.8■□□□□ 0.44
PDE4D-203ENST00000340635 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
PDE4D-203ENST00000340635 MAPK8IP3Q9UPT6 1336 aa17.79■□□□□ 0.44
PDE4D-203ENST00000340635 MCCP23508 829 aa17.78■□□□□ 0.44
PDE4D-203ENST00000340635 HSCBQ8IWL3 235 aa17.78■□□□□ 0.44
PDE4D-203ENST00000340635 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
PDE4D-203ENST00000340635 TSPY4P0CV99 314 aa17.76■□□□□ 0.43
PDE4D-203ENST00000340635 TSPY10P0CW01 314 aa17.76■□□□□ 0.43
PDE4D-203ENST00000340635 CALRP27797 417 aaKnown RBP17.76■□□□□ 0.43
PDE4D-203ENST00000340635 RGS3P49796 1198 aa17.75■□□□□ 0.43
PDE4D-203ENST00000340635 KRI1Q8N9T8 703 aaKnown RBP17.74■□□□□ 0.43
PDE4D-203ENST00000340635 EIF4G2P78344 907 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDE4D-203ENST00000340635 ARID3AQ99856 593 aa17.74■□□□□ 0.43
PDE4D-203ENST00000340635 NOP58Q9Y2X3 529 aaKnown RBP17.73■□□□□ 0.43
PDE4D-203ENST00000340635 KNSTRNQ9Y448 316 aa17.72■□□□□ 0.43
PDE4D-203ENST00000340635 USP35Q9P2H5 1018 aa17.72■□□□□ 0.43
PDE4D-203ENST00000340635 NEUROD2Q15784 382 aa17.7■□□□□ 0.42
PDE4D-203ENST00000340635 SETQ01105 290 aaPredicted RBP17.7■□□□□ 0.42
PDE4D-203ENST00000340635 FRAT1Q92837 279 aaPredicted RBP17.7■□□□□ 0.42
PDE4D-203ENST00000340635 TPM4P67936 248 aa17.68■□□□□ 0.42
PDE4D-203ENST00000340635 MS4A1P11836 297 aa17.68■□□□□ 0.42
PDE4D-203ENST00000340635 CEP89Q96ST8 783 aa17.67■□□□□ 0.42
PDE4D-203ENST00000340635 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
PDE4D-203ENST00000340635 CDCA8Q53HL2 280 aa17.67■□□□□ 0.42
PDE4D-203ENST00000340635 HIRIP3Q9BW71 556 aaPredicted RBP17.64■□□□□ 0.41
PDE4D-203ENST00000340635 SPRYD3Q8NCJ5 442 aa17.64■□□□□ 0.41
PDE4D-203ENST00000340635 SENP3-EIF4A1A0A087X0R7 540 aa17.63■□□□□ 0.41
PDE4D-203ENST00000340635 FBXO3Q9UK99 471 aa17.63■□□□□ 0.41
PDE4D-203ENST00000340635 HTATSF1O43719 755 aaKnown RBP17.61■□□□□ 0.41
PDE4D-203ENST00000340635 CFAP44Q96MT7 982 aa17.61■□□□□ 0.41
PDE4D-203ENST00000340635 TMX4Q9H1E5 349 aaPredicted RBP17.61■□□□□ 0.41
PDE4D-203ENST00000340635 KIAA1211Q6ZU35 1233 aa17.61■□□□□ 0.41
PDE4D-203ENST00000340635 MIER1Q8N108 512 aa17.6■□□□□ 0.41
PDE4D-203ENST00000340635 CCDC34Q96HJ3 373 aa17.59■□□□□ 0.41
PDE4D-203ENST00000340635 PTMSP20962 102 aa17.59■□□□□ 0.41
PDE4D-203ENST00000340635 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.4
PDE4D-203ENST00000340635 SUPT16HQ9Y5B9 1047 aaKnown RBP17.57■□□□□ 0.4
PDE4D-203ENST00000340635 ANO8Q9HCE9 1232 aaPredicted RBP17.57■□□□□ 0.4
PDE4D-203ENST00000340635 SYAP1Q96A49 352 aaPredicted RBP17.56■□□□□ 0.4
PDE4D-203ENST00000340635 DEKP35659 375 aaKnown RBP17.56■□□□□ 0.4
PDE4D-203ENST00000340635 CREBRFQ8IUR6 639 aa17.56■□□□□ 0.4
PDE4D-203ENST00000340635 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
PDE4D-203ENST00000340635 PATL2C9JE40 543 aaKnown RBP17.55■□□□□ 0.4
PDE4D-203ENST00000340635 RASSF8Q8NHQ8 419 aa17.55■□□□□ 0.4
PDE4D-203ENST00000340635 PPP4R2Q9NY27 417 aa17.55■□□□□ 0.4
PDE4D-203ENST00000340635 POGKQ9P215 609 aa17.54■□□□□ 0.4
PDE4D-203ENST00000340635 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
PDE4D-203ENST00000340635 RGL3Q3MIN7 710 aa17.54■□□□□ 0.4
PDE4D-203ENST00000340635 GBP4Q96PP9 640 aa17.54■□□□□ 0.4
PDE4D-203ENST00000340635 TPM3P06753 285 aa17.53■□□□□ 0.4
PDE4D-203ENST00000340635 MTUS2Q5JR59 1369 aa17.52■□□□□ 0.39
PDE4D-203ENST00000340635 VPS53Q5VIR6 699 aa17.48■□□□□ 0.39
PDE4D-203ENST00000340635 RRP12Q5JTH9 1297 aaKnown RBP17.47■□□□□ 0.39
PDE4D-203ENST00000340635 GZF1Q9H116 711 aaPredicted RBP17.46■□□□□ 0.39
PDE4D-203ENST00000340635 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms