RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 PPM1GO15355 546 aaPredicted RBP4.6□□□□□ -1.67
SOCS4-201ENST00000339298 CLSPNQ9HAW4 1339 aa4.6□□□□□ -1.67
SOCS4-201ENST00000339298 LMOD2Q6P5Q4 547 aa4.59□□□□□ -1.67
SOCS4-201ENST00000339298 FBXW7Q969H0 707 aa4.59□□□□□ -1.67
SOCS4-201ENST00000339298 MAPK8IP2Q13387 824 aaPredicted RBP4.58□□□□□ -1.68
SOCS4-201ENST00000339298 PDE4CQ08493 712 aa4.58□□□□□ -1.68
SOCS4-201ENST00000339298 STK25O00506 426 aa4.57□□□□□ -1.68
SOCS4-201ENST00000339298 RAD21O60216 631 aa4.57□□□□□ -1.68
SOCS4-201ENST00000339298 CAPN15O75808 1086 aa4.57□□□□□ -1.68
SOCS4-201ENST00000339298 CCDC136Q96JN2 1154 aa4.57□□□□□ -1.68
SOCS4-201ENST00000339298 IL27Q8NEV9 243 aa4.57□□□□□ -1.68
SOCS4-201ENST00000339298 APBB1O00213 710 aa4.57□□□□□ -1.68
SOCS4-201ENST00000339298 VASPP50552 380 aaPredicted RBP4.56□□□□□ -1.68
SOCS4-201ENST00000339298 HMGB1P09429 215 aaKnown RBP4.56□□□□□ -1.68
SOCS4-201ENST00000339298 PTMSP20962 102 aa4.54□□□□□ -1.68
SOCS4-201ENST00000339298 TMEM132AQ24JP5 1023 aa4.54□□□□□ -1.68
SOCS4-201ENST00000339298 CCDC97Q96F63 343 aaPredicted RBP4.54□□□□□ -1.68
SOCS4-201ENST00000339298 TSC1Q92574 1164 aa4.53□□□□□ -1.68
SOCS4-201ENST00000339298 STK24Q9Y6E0 443 aa4.53□□□□□ -1.68
SOCS4-201ENST00000339298 UBTFP17480 764 aaKnown RBP4.53□□□□□ -1.68
SOCS4-201ENST00000339298 MYCNP04198 464 aaPredicted RBP4.53□□□□□ -1.68
SOCS4-201ENST00000339298 PKNOX2Q96KN3 472 aa4.52□□□□□ -1.69
SOCS4-201ENST00000339298 APLP2Q06481 763 aa4.52□□□□□ -1.69
SOCS4-201ENST00000339298 KCTD17Q8N5Z5 321 aa4.51□□□□□ -1.69
SOCS4-201ENST00000339298 NAP1L5Q96NT1 182 aaPredicted RBP4.51□□□□□ -1.69
SOCS4-201ENST00000339298 CLEC11AQ9Y240 323 aa4.51□□□□□ -1.69
SOCS4-201ENST00000339298 TRIM26Q12899 539 aaPredicted RBP4.5□□□□□ -1.69
SOCS4-201ENST00000339298 SPOCK2Q92563 424 aa4.5□□□□□ -1.69
SOCS4-201ENST00000339298 ABCB7O75027 752 aa4.49□□□□□ -1.69
SOCS4-201ENST00000339298 RFX1P22670 979 aa4.48□□□□□ -1.69
SOCS4-201ENST00000339298 TTLL12Q14166 644 aaPredicted RBP4.48□□□□□ -1.69
SOCS4-201ENST00000339298 GOLGA2Q08379 1002 aa4.47□□□□□ -1.69
SOCS4-201ENST00000339298 DHX37Q8IY37 1157 aaKnown RBP4.47□□□□□ -1.69
SOCS4-201ENST00000339298 BBXQ8WY36 941 aaPredicted RBP4.47□□□□□ -1.69
SOCS4-201ENST00000339298 TMCO4Q5TGY1 634 aa4.46□□□□□ -1.7
SOCS4-201ENST00000339298 APPP05067 770 aa4.46□□□□□ -1.7
SOCS4-201ENST00000339298 KDM2AQ9Y2K7 1162 aa4.46□□□□□ -1.7
SOCS4-201ENST00000339298 AXDND1Q5T1B0 1012 aaPredicted RBP4.46□□□□□ -1.7
SOCS4-201ENST00000339298 IRX6P78412 446 aaPredicted RBP4.45□□□□□ -1.7
SOCS4-201ENST00000339298 FOXD4L5Q5VV16 416 aaPredicted RBP4.45□□□□□ -1.7
SOCS4-201ENST00000339298 FOXD4L4Q8WXT5 416 aaPredicted RBP4.45□□□□□ -1.7
SOCS4-201ENST00000339298 PATL2C9JE40 543 aaKnown RBP4.45□□□□□ -1.7
SOCS4-201ENST00000339298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.44□□□□□ -1.7
SOCS4-201ENST00000339298 HNRNPUL2Q1KMD3 747 aaKnown RBP4.44□□□□□ -1.7
SOCS4-201ENST00000339298 RSPH6AQ9H0K4 717 aa4.44□□□□□ -1.7
SOCS4-201ENST00000339298 NUTM2FA1L443 756 aa4.43□□□□□ -1.7
SOCS4-201ENST00000339298 TMX4Q9H1E5 349 aaPredicted RBP4.43□□□□□ -1.7
SOCS4-201ENST00000339298 TNNT2P45379 298 aaPredicted RBP4.42□□□□□ -1.7
SOCS4-201ENST00000339298 NEFMP07197 916 aa4.42□□□□□ -1.7
SOCS4-201ENST00000339298 GZF1Q9H116 711 aaPredicted RBP4.42□□□□□ -1.7
SOCS4-201ENST00000339298 CALRP27797 417 aaKnown RBP4.41□□□□□ -1.7
SOCS4-201ENST00000339298 ZNF777Q9ULD5 760 aaPredicted RBP4.41□□□□□ -1.7
SOCS4-201ENST00000339298 SAMD1Q6SPF0 538 aaPredicted RBP4.41□□□□□ -1.7
SOCS4-201ENST00000339298 LAS1LQ9Y4W2 734 aaKnown RBP4.41□□□□□ -1.7
SOCS4-201ENST00000339298 ZNF316A6NFI3 1004 aaPredicted RBP4.41□□□□□ -1.7
SOCS4-201ENST00000339298 SLC24A3Q9HC58 644 aa4.41□□□□□ -1.7
SOCS4-201ENST00000339298 ZNF692Q9BU19 519 aaPredicted RBP4.4□□□□□ -1.7
SOCS4-201ENST00000339298 RGL2O15211 777 aa4.4□□□□□ -1.7
SOCS4-201ENST00000339298 DEKP35659 375 aaKnown RBP4.4□□□□□ -1.7
SOCS4-201ENST00000339298 AAMPQ13685 434 aa4.4□□□□□ -1.7
SOCS4-201ENST00000339298 G3V3G9 751 aa4.4□□□□□ -1.7
SOCS4-201ENST00000339298 CHMP4AQ9BY43 222 aa4.4□□□□□ -1.7
SOCS4-201ENST00000339298 ACIN1Q9UKV3 1341 aaKnown RBP4.4□□□□□ -1.71
SOCS4-201ENST00000339298 PSMD1Q99460 953 aa4.4□□□□□ -1.71
SOCS4-201ENST00000339298 CSPP1Q1MSJ5 1256 aa4.4□□□□□ -1.71
SOCS4-201ENST00000339298 WWC1Q8IX03 1113 aa4.4□□□□□ -1.71
SOCS4-201ENST00000339298 BIN2Q9UBW5 565 aaPredicted RBP4.4□□□□□ -1.71
SOCS4-201ENST00000339298 TAF7LQ5H9L4 462 aa4.39□□□□□ -1.71
SOCS4-201ENST00000339298 NCLP19338 710 aaKnown RBP4.38□□□□□ -1.71
SOCS4-201ENST00000339298 TMC1Q8TDI8 760 aa4.38□□□□□ -1.71
SOCS4-201ENST00000339298 P3H3Q8IVL6 736 aa4.37□□□□□ -1.71
SOCS4-201ENST00000339298 HSP90B1P14625 803 aaKnown RBP4.37□□□□□ -1.71
SOCS4-201ENST00000339298 CDCA8Q53HL2 280 aa4.37□□□□□ -1.71
SOCS4-201ENST00000339298 ANP32EQ9BTT0 268 aa4.37□□□□□ -1.71
SOCS4-201ENST00000339298 FOSBP53539 338 aa4.37□□□□□ -1.71
SOCS4-201ENST00000339298 CNGB1Q14028 1251 aaPredicted RBP4.37□□□□□ -1.71
SOCS4-201ENST00000339298 E9PSI1 815 aa4.36□□□□□ -1.71
SOCS4-201ENST00000339298 MEX3CQ5U5Q3 659 aaKnown RBP4.36□□□□□ -1.71
SOCS4-201ENST00000339298 TRIM44Q96DX7 344 aaPredicted RBP4.36□□□□□ -1.71
SOCS4-201ENST00000339298 BCL11BQ9C0K0 894 aaPredicted RBP4.36□□□□□ -1.71
SOCS4-201ENST00000339298 BRD2P25440 801 aaKnown RBP4.35□□□□□ -1.71
SOCS4-201ENST00000339298 IFNLR1Q8IU57 520 aaPredicted RBP4.35□□□□□ -1.71
SOCS4-201ENST00000339298 GPBP1L1Q9HC44 474 aaPredicted RBP4.35□□□□□ -1.71
SOCS4-201ENST00000339298 OS9Q13438 667 aaPredicted RBP4.35□□□□□ -1.71
SOCS4-201ENST00000339298 SMYD5Q6GMV2 418 aa4.35□□□□□ -1.71
SOCS4-201ENST00000339298 ZBTB47Q9UFB7 747 aaPredicted RBP4.35□□□□□ -1.71
SOCS4-201ENST00000339298 TSPYL2Q9H2G4 693 aaPredicted RBP4.35□□□□□ -1.71
SOCS4-201ENST00000339298 POLA2Q14181 598 aa4.34□□□□□ -1.72
SOCS4-201ENST00000339298 PPP4R4Q6NUP7 873 aa4.34□□□□□ -1.72
SOCS4-201ENST00000339298 UBE2Q2Q8WVN8 375 aa4.33□□□□□ -1.72
SOCS4-201ENST00000339298 STK11IPQ8N1F8 1099 aa4.33□□□□□ -1.72
SOCS4-201ENST00000339298 PIK3R5Q8WYR1 880 aa4.33□□□□□ -1.72
SOCS4-201ENST00000339298 GRXCR2A6NFK2 248 aa4.33□□□□□ -1.72
SOCS4-201ENST00000339298 ANO8Q9HCE9 1232 aaPredicted RBP4.32□□□□□ -1.72
SOCS4-201ENST00000339298 RNF40O75150 1001 aa4.32□□□□□ -1.72
SOCS4-201ENST00000339298 ABL2P42684 1182 aa4.31□□□□□ -1.72
SOCS4-201ENST00000339298 CCDC85CA6NKD9 419 aa4.31□□□□□ -1.72
SOCS4-201ENST00000339298 SHROOM4Q9ULL8 1493 aa4.31□□□□□ -1.72
SOCS4-201ENST00000339298 NOL8Q76FK4 1167 aaKnown RBP4.31□□□□□ -1.72
SOCS4-201ENST00000339298 ZNF219Q9P2Y4 722 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms