RNA–Protein interactions for RNA: ENST00000338382.10

FOCAD-201, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FOCAD, Length 5,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-201ENST00000338382 PPP4R2Q9NY27 417 aa9.6□□□□□ -0.87
FOCAD-201ENST00000338382 RRP9O43818 475 aaKnown RBP9.59□□□□□ -0.87
FOCAD-201ENST00000338382 IPO9Q96P70 1041 aaKnown RBP9.58□□□□□ -0.88
FOCAD-201ENST00000338382 RBM10P98175 930 aaKnown RBP9.58□□□□□ -0.88
FOCAD-201ENST00000338382 FAM43AQ8N2R8 423 aa9.56□□□□□ -0.88
FOCAD-201ENST00000338382 ARXQ96QS3 562 aa9.56□□□□□ -0.88
FOCAD-201ENST00000338382 MSH5O43196 834 aa9.55□□□□□ -0.88
FOCAD-201ENST00000338382 IRX6P78412 446 aaPredicted RBP9.55□□□□□ -0.88
FOCAD-201ENST00000338382 NCBP3Q53F19 620 aaKnown RBP9.55□□□□□ -0.88
FOCAD-201ENST00000338382 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
FOCAD-201ENST00000338382 GSE1Q14687 1217 aa9.54□□□□□ -0.88
FOCAD-201ENST00000338382 TRIM52Q96A61 297 aa9.53□□□□□ -0.88
FOCAD-201ENST00000338382 PTMSP20962 102 aa9.52□□□□□ -0.88
FOCAD-201ENST00000338382 BCL11BQ9C0K0 894 aaPredicted RBP9.52□□□□□ -0.88
FOCAD-201ENST00000338382 FGD1P98174 961 aa9.52□□□□□ -0.89
FOCAD-201ENST00000338382 HNRNPUQ00839 825 aaKnown RBP eCLIP9.5□□□□□ -0.89
FOCAD-201ENST00000338382 ARID4BQ4LE39 1312 aaPredicted RBP9.5□□□□□ -0.89
FOCAD-201ENST00000338382 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
FOCAD-201ENST00000338382 HOMEZQ8IX15 550 aa9.48□□□□□ -0.89
FOCAD-201ENST00000338382 BRPF3Q9ULD4 1205 aa9.47□□□□□ -0.89
FOCAD-201ENST00000338382 DNTTIP2Q5QJE6 756 aaKnown RBP9.45□□□□□ -0.9
FOCAD-201ENST00000338382 APPP05067 770 aa9.44□□□□□ -0.9
FOCAD-201ENST00000338382 PAXIP1Q6ZW49 1069 aaPredicted RBP9.44□□□□□ -0.9
FOCAD-201ENST00000338382 BBXQ8WY36 941 aaPredicted RBP9.44□□□□□ -0.9
FOCAD-201ENST00000338382 TPM2P07951 284 aa9.43□□□□□ -0.9
FOCAD-201ENST00000338382 UBTFP17480 764 aaKnown RBP9.43□□□□□ -0.9
FOCAD-201ENST00000338382 MAP7D2Q96T17 732 aa9.43□□□□□ -0.9
FOCAD-201ENST00000338382 KLHL34Q8N239 644 aa9.42□□□□□ -0.9
FOCAD-201ENST00000338382 AAMPQ13685 434 aa9.41□□□□□ -0.9
FOCAD-201ENST00000338382 NAP1L2Q9ULW6 460 aaPredicted RBP9.4□□□□□ -0.9
FOCAD-201ENST00000338382 DDX10Q13206 875 aaKnown RBP9.4□□□□□ -0.9
FOCAD-201ENST00000338382 BECN1Q14457 450 aa9.4□□□□□ -0.91
FOCAD-201ENST00000338382 B4GALNT3Q6L9W6 998 aa9.39□□□□□ -0.91
FOCAD-201ENST00000338382 BRD2P25440 801 aaKnown RBP9.39□□□□□ -0.91
FOCAD-201ENST00000338382 MSNP26038 577 aaKnown RBP9.38□□□□□ -0.91
FOCAD-201ENST00000338382 MTERF4Q7Z6M4 381 aaKnown RBP9.36□□□□□ -0.91
FOCAD-201ENST00000338382 TNNT3P45378 269 aaPredicted RBP9.36□□□□□ -0.91
FOCAD-201ENST00000338382 GOLGA6L3A6NEY3 463 aa9.35□□□□□ -0.91
FOCAD-201ENST00000338382 C11orf95C9JLR9 678 aaPredicted RBP9.35□□□□□ -0.91
FOCAD-201ENST00000338382 C14orf37Q86TY3 774 aa9.35□□□□□ -0.91
FOCAD-201ENST00000338382 CCER2I3L3R5 266 aa9.34□□□□□ -0.91
FOCAD-201ENST00000338382 ARID3AQ99856 593 aa9.34□□□□□ -0.91
FOCAD-201ENST00000338382 TAF3Q5VWG9 929 aa9.34□□□□□ -0.91
FOCAD-201ENST00000338382 FRAT1Q92837 279 aaPredicted RBP9.33□□□□□ -0.92
FOCAD-201ENST00000338382 PDCL3Q9H2J4 239 aa9.33□□□□□ -0.92
FOCAD-201ENST00000338382 PAK3O75914 559 aaPredicted RBP9.33□□□□□ -0.92
FOCAD-201ENST00000338382 UPF2Q9HAU5 1272 aaKnown RBP9.33□□□□□ -0.92
FOCAD-201ENST00000338382 CALD1Q05682 793 aaKnown RBP9.33□□□□□ -0.92
FOCAD-201ENST00000338382 TULP1O00294 542 aaPredicted RBP9.31□□□□□ -0.92
FOCAD-201ENST00000338382 EEA1Q15075 1411 aa9.31□□□□□ -0.92
FOCAD-201ENST00000338382 TCERG1O14776 1098 aaKnown RBP9.29□□□□□ -0.92
FOCAD-201ENST00000338382 IPO4Q8TEX9 1081 aaKnown RBP9.29□□□□□ -0.92
FOCAD-201ENST00000338382 CHMP4BQ9H444 224 aaKnown RBP9.28□□□□□ -0.92
FOCAD-201ENST00000338382 FAM13BQ9NYF5 915 aa9.28□□□□□ -0.92
FOCAD-201ENST00000338382 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.27□□□□□ -0.92
FOCAD-201ENST00000338382 HSP90B1P14625 803 aaKnown RBP9.27□□□□□ -0.93
FOCAD-201ENST00000338382 RGS3P49796 1198 aa9.27□□□□□ -0.93
FOCAD-201ENST00000338382 ZNF771Q7L3S4 317 aaPredicted RBP9.26□□□□□ -0.93
FOCAD-201ENST00000338382 IRX3P78415 501 aaPredicted RBP9.26□□□□□ -0.93
FOCAD-201ENST00000338382 PATL2C9JE40 543 aaKnown RBP9.26□□□□□ -0.93
FOCAD-201ENST00000338382 FAM9BQ8IZU0 186 aa9.26□□□□□ -0.93
FOCAD-201ENST00000338382 PTMAP06454 111 aaKnown RBP9.25□□□□□ -0.93
FOCAD-201ENST00000338382 NFKBIBQ15653 356 aa9.25□□□□□ -0.93
FOCAD-201ENST00000338382 MYH16Q9H6N6 1097 aa9.24□□□□□ -0.93
FOCAD-201ENST00000338382 FTSJ3Q8IY81 847 aaKnown RBP9.23□□□□□ -0.93
FOCAD-201ENST00000338382 GOLGA6L22H0YM25 854 aa9.22□□□□□ -0.93
FOCAD-201ENST00000338382 WASHC2AQ641Q2 1341 aa9.21□□□□□ -0.93
FOCAD-201ENST00000338382 WASHC2CQ9Y4E1 1318 aa9.21□□□□□ -0.93
FOCAD-201ENST00000338382 DHX37Q8IY37 1157 aaKnown RBP9.21□□□□□ -0.94
FOCAD-201ENST00000338382 CHMP4AQ9BY43 222 aa9.21□□□□□ -0.94
FOCAD-201ENST00000338382 CHAF1AQ13111 956 aaPredicted RBP9.21□□□□□ -0.94
FOCAD-201ENST00000338382 CALRP27797 417 aaKnown RBP9.2□□□□□ -0.94
FOCAD-201ENST00000338382 ZHX1Q9UKY1 873 aaPredicted RBP9.2□□□□□ -0.94
FOCAD-201ENST00000338382 CCDC66A2RUB6 948 aa9.2□□□□□ -0.94
FOCAD-201ENST00000338382 SMAP1Q8IYB5 467 aaPredicted RBP9.19□□□□□ -0.94
FOCAD-201ENST00000338382 PLCD3Q8N3E9 789 aa9.18□□□□□ -0.94
FOCAD-201ENST00000338382 CSPP1Q1MSJ5 1256 aa9.18□□□□□ -0.94
FOCAD-201ENST00000338382 MRS2Q9HD23 443 aa9.17□□□□□ -0.94
FOCAD-201ENST00000338382 BCCIPQ9P287 314 aaKnown RBP eCLIP9.16□□□□□ -0.94
FOCAD-201ENST00000338382 PDE4AP27815 886 aa9.16□□□□□ -0.94
FOCAD-201ENST00000338382 WWC1Q8IX03 1113 aa9.16□□□□□ -0.94
FOCAD-201ENST00000338382 GZF1Q9H116 711 aaPredicted RBP9.16□□□□□ -0.94
FOCAD-201ENST00000338382 TSPYL1Q9H0U9 437 aa9.15□□□□□ -0.94
FOCAD-201ENST00000338382 AXDND1Q5T1B0 1012 aaPredicted RBP9.15□□□□□ -0.94
FOCAD-201ENST00000338382 CLGNO14967 610 aa9.14□□□□□ -0.95
FOCAD-201ENST00000338382 KIAA1211Q6ZU35 1233 aa9.14□□□□□ -0.95
FOCAD-201ENST00000338382 CLCN1P35523 988 aa9.14□□□□□ -0.95
FOCAD-201ENST00000338382 KCNH8Q96L42 1107 aa9.14□□□□□ -0.95
FOCAD-201ENST00000338382 MS4A1P11836 297 aa9.14□□□□□ -0.95
FOCAD-201ENST00000338382 AEBP1Q8IUX7 1158 aa9.14□□□□□ -0.95
FOCAD-201ENST00000338382 PRDM10Q9NQV6 1147 aa9.14□□□□□ -0.95
FOCAD-201ENST00000338382 CCDC9Q9Y3X0 531 aaKnown RBP9.14□□□□□ -0.95
FOCAD-201ENST00000338382 MRE11P49959 708 aa9.13□□□□□ -0.95
FOCAD-201ENST00000338382 MAPK8IP2Q13387 824 aaPredicted RBP9.13□□□□□ -0.95
FOCAD-201ENST00000338382 HMGB1P09429 215 aaKnown RBP9.13□□□□□ -0.95
FOCAD-201ENST00000338382 LETM1O95202 739 aaPredicted RBP9.13□□□□□ -0.95
FOCAD-201ENST00000338382 DNAJC2Q99543 621 aaKnown RBP9.13□□□□□ -0.95
FOCAD-201ENST00000338382 CC2D1BQ5T0F9 858 aaKnown RBP9.12□□□□□ -0.95
FOCAD-201ENST00000338382 GOLGA6L6A8MZA4 724 aa9.12□□□□□ -0.95
FOCAD-201ENST00000338382 R3HCC1Q9Y3T6 440 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms