RNA–Protein interactions for RNA: ENST00000338356.7

CPM-201, Transcript of carboxypeptidase M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPM, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-201ENST00000338356 TSPY10P0CW01 314 aa11.53□□□□□ -0.56
CPM-201ENST00000338356 TONSLQ96HA7 1378 aa11.52□□□□□ -0.57
CPM-201ENST00000338356 ZCCHC6Q5VYS8 1495 aaKnown RBP11.52□□□□□ -0.57
CPM-201ENST00000338356 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
CPM-201ENST00000338356 CCDC136Q96JN2 1154 aa11.5□□□□□ -0.57
CPM-201ENST00000338356 HIRIP3Q9BW71 556 aaPredicted RBP11.48□□□□□ -0.57
CPM-201ENST00000338356 UPF2Q9HAU5 1272 aaKnown RBP11.48□□□□□ -0.57
CPM-201ENST00000338356 FOXD1Q16676 465 aa11.47□□□□□ -0.57
CPM-201ENST00000338356 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
CPM-201ENST00000338356 ANP32EQ9BTT0 268 aa11.45□□□□□ -0.58
CPM-201ENST00000338356 DCAF8L1A6NGE4 600 aa11.44□□□□□ -0.58
CPM-201ENST00000338356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.58
CPM-201ENST00000338356 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
CPM-201ENST00000338356 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
CPM-201ENST00000338356 SENP3-EIF4A1A0A087X0R7 540 aa11.4□□□□□ -0.58
CPM-201ENST00000338356 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
CPM-201ENST00000338356 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
CPM-201ENST00000338356 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
CPM-201ENST00000338356 CARMIL2Q6F5E8 1435 aa11.38□□□□□ -0.59
CPM-201ENST00000338356 ZBTB7CA1YPR0 619 aa11.37□□□□□ -0.59
CPM-201ENST00000338356 MRS2Q9HD23 443 aa11.37□□□□□ -0.59
CPM-201ENST00000338356 WDR43Q15061 677 aaKnown RBP eCLIP11.36□□□□□ -0.59
CPM-201ENST00000338356 DDRGK1Q96HY6 314 aa11.36□□□□□ -0.59
CPM-201ENST00000338356 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.34□□□□□ -0.59
CPM-201ENST00000338356 RSF1Q96T23 1441 aaPredicted RBP11.34□□□□□ -0.59
CPM-201ENST00000338356 LAS1LQ9Y4W2 734 aaKnown RBP11.33□□□□□ -0.6
CPM-201ENST00000338356 MLECQ14165 292 aa11.33□□□□□ -0.6
CPM-201ENST00000338356 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
CPM-201ENST00000338356 BAZ1AQ9NRL2 1556 aaPredicted RBP11.32□□□□□ -0.6
CPM-201ENST00000338356 MTUS2Q5JR59 1369 aa11.32□□□□□ -0.6
CPM-201ENST00000338356 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
CPM-201ENST00000338356 KANK1Q14678 1352 aa11.31□□□□□ -0.6
CPM-201ENST00000338356 SUPT16HQ9Y5B9 1047 aaKnown RBP11.3□□□□□ -0.6
CPM-201ENST00000338356 TRIM44Q96DX7 344 aaPredicted RBP11.29□□□□□ -0.6
CPM-201ENST00000338356 NAP1L5Q96NT1 182 aaPredicted RBP11.29□□□□□ -0.6
CPM-201ENST00000338356 CLIP1P30622 1438 aa11.28□□□□□ -0.6
CPM-201ENST00000338356 KIF27Q86VH2 1401 aa11.28□□□□□ -0.6
CPM-201ENST00000338356 NCLP19338 710 aaKnown RBP11.28□□□□□ -0.6
CPM-201ENST00000338356 CYB5RLQ6IPT4 315 aa11.28□□□□□ -0.6
CPM-201ENST00000338356 SENP3Q9H4L4 574 aaPredicted RBP11.28□□□□□ -0.6
CPM-201ENST00000338356 NPHP1O15259 732 aa11.27□□□□□ -0.6
CPM-201ENST00000338356 BECN1Q14457 450 aa11.27□□□□□ -0.61
CPM-201ENST00000338356 EIF4G1Q04637 1599 aaKnown RBP11.26□□□□□ -0.61
CPM-201ENST00000338356 NOP58Q9Y2X3 529 aaKnown RBP11.26□□□□□ -0.61
CPM-201ENST00000338356 LMOD2Q6P5Q4 547 aa11.25□□□□□ -0.61
CPM-201ENST00000338356 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
CPM-201ENST00000338356 WRNQ14191 1432 aaPredicted RBP eCLIP11.25□□□□□ -0.61
CPM-201ENST00000338356 MEX3CQ5U5Q3 659 aaKnown RBP11.25□□□□□ -0.61
CPM-201ENST00000338356 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
CPM-201ENST00000338356 PHF23Q9BUL5 403 aaPredicted RBP11.22□□□□□ -0.61
CPM-201ENST00000338356 MYH16Q9H6N6 1097 aa11.22□□□□□ -0.61
CPM-201ENST00000338356 EID1Q9Y6B2 187 aa11.22□□□□□ -0.61
CPM-201ENST00000338356 CEP162Q5TB80 1403 aa11.21□□□□□ -0.61
CPM-201ENST00000338356 CFDP1Q9UEE9 299 aaPredicted RBP11.21□□□□□ -0.61
CPM-201ENST00000338356 RRP7BPQ9NSQ0 103 aa11.2□□□□□ -0.62
CPM-201ENST00000338356 DEKP35659 375 aaKnown RBP11.2□□□□□ -0.62
CPM-201ENST00000338356 PTMAP06454 111 aaKnown RBP11.19□□□□□ -0.62
CPM-201ENST00000338356 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
CPM-201ENST00000338356 CCDC9Q9Y3X0 531 aaKnown RBP11.19□□□□□ -0.62
CPM-201ENST00000338356 DNTTIP2Q5QJE6 756 aaKnown RBP11.18□□□□□ -0.62
CPM-201ENST00000338356 GOLGA3Q08378 1498 aa11.18□□□□□ -0.62
CPM-201ENST00000338356 EIF4G2P78344 907 aaKnown RBP eCLIP11.18□□□□□ -0.62
CPM-201ENST00000338356 SOGA1O94964 1423 aa11.16□□□□□ -0.62
CPM-201ENST00000338356 POGKQ9P215 609 aa11.16□□□□□ -0.62
CPM-201ENST00000338356 B4GALNT3Q6L9W6 998 aa11.15□□□□□ -0.62
CPM-201ENST00000338356 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
CPM-201ENST00000338356 TMX4Q9H1E5 349 aaPredicted RBP11.14□□□□□ -0.63
CPM-201ENST00000338356 GOLGA6L22H0YM25 854 aa11.14□□□□□ -0.63
CPM-201ENST00000338356 TNNT2P45379 298 aaPredicted RBP11.14□□□□□ -0.63
CPM-201ENST00000338356 PPP4R2Q9NY27 417 aa11.14□□□□□ -0.63
CPM-201ENST00000338356 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
CPM-201ENST00000338356 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
CPM-201ENST00000338356 PPM1GO15355 546 aaPredicted RBP11.14□□□□□ -0.63
CPM-201ENST00000338356 CADPSQ9ULU8 1353 aa11.12□□□□□ -0.63
CPM-201ENST00000338356 EFCAB2Q5VUJ9 269 aa11.12□□□□□ -0.63
CPM-201ENST00000338356 RGS3P49796 1198 aa11.11□□□□□ -0.63
CPM-201ENST00000338356 CASC1Q6TDU7 716 aa11.11□□□□□ -0.63
CPM-201ENST00000338356 EEA1Q15075 1411 aa11.1□□□□□ -0.63
CPM-201ENST00000338356 HSP90AB1P08238 724 aaKnown RBP11.1□□□□□ -0.63
CPM-201ENST00000338356 FTSJ3Q8IY81 847 aaKnown RBP11.1□□□□□ -0.63
CPM-201ENST00000338356 FAM69CQ0P6D2 419 aa11.09□□□□□ -0.63
CPM-201ENST00000338356 CCNB3Q8WWL7 1395 aa11.09□□□□□ -0.63
CPM-201ENST00000338356 CC2D1BQ5T0F9 858 aaKnown RBP11.09□□□□□ -0.63
CPM-201ENST00000338356 CUX2O14529 1486 aa11.09□□□□□ -0.63
CPM-201ENST00000338356 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
CPM-201ENST00000338356 RBM19Q9Y4C8 960 aaKnown RBP11.09□□□□□ -0.63
CPM-201ENST00000338356 SIN3AQ96ST3 1273 aa11.09□□□□□ -0.63
CPM-201ENST00000338356 PLCB2Q00722 1185 aa11.07□□□□□ -0.64
CPM-201ENST00000338356 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
CPM-201ENST00000338356 CDK11BP21127 795 aaKnown RBP11.06□□□□□ -0.64
CPM-201ENST00000338356 CDCA8Q53HL2 280 aa11.06□□□□□ -0.64
CPM-201ENST00000338356 GGT6Q6P531 493 aa11.06□□□□□ -0.64
CPM-201ENST00000338356 ARID3AQ99856 593 aa11.05□□□□□ -0.64
CPM-201ENST00000338356 SF3B2Q13435 895 aaKnown RBP11.05□□□□□ -0.64
CPM-201ENST00000338356 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
CPM-201ENST00000338356 RGL3Q3MIN7 710 aa11.05□□□□□ -0.64
CPM-201ENST00000338356 FRAT1Q92837 279 aaPredicted RBP11.05□□□□□ -0.64
CPM-201ENST00000338356 CARMIL1Q5VZK9 1371 aa11.04□□□□□ -0.64
CPM-201ENST00000338356 TULP1O00294 542 aaPredicted RBP11.04□□□□□ -0.64
CPM-201ENST00000338356 CARD11Q9BXL7 1154 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms