RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 NRDCO43847 1150 aa16.69■□□□□ 0.26
RERE-201ENST00000337907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.68■□□□□ 0.269e-10■■■□□ 18.2
RERE-201ENST00000337907 NPHP1O15259 732 aa16.66■□□□□ 0.26
RERE-201ENST00000337907 L1TD1Q5T7N2 865 aaKnown RBP16.64■□□□□ 0.25
RERE-201ENST00000337907 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
RERE-201ENST00000337907 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
RERE-201ENST00000337907 MRS2Q9HD23 443 aa16.61■□□□□ 0.25
RERE-201ENST00000337907 ABCC9O60706 1549 aa16.61■□□□□ 0.25
RERE-201ENST00000337907 CFAP53Q96M91 514 aa16.59■□□□□ 0.25
RERE-201ENST00000337907 FTSJ3Q8IY81 847 aaKnown RBP16.58■□□□□ 0.25
RERE-201ENST00000337907 TSPY4P0CV99 314 aa16.58■□□□□ 0.24
RERE-201ENST00000337907 TSPY10P0CW01 314 aa16.58■□□□□ 0.24
RERE-201ENST00000337907 GOLGA2Q08379 1002 aa16.57■□□□□ 0.24
RERE-201ENST00000337907 ERICH6BQ5W0A0 696 aa16.57■□□□□ 0.24
RERE-201ENST00000337907 CHAF1AQ13111 956 aaPredicted RBP16.57■□□□□ 0.24
RERE-201ENST00000337907 CLSTN1O94985 981 aa16.56■□□□□ 0.24
RERE-201ENST00000337907 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
RERE-201ENST00000337907 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
RERE-201ENST00000337907 CHMP4BQ9H444 224 aaKnown RBP16.55■□□□□ 0.24
RERE-201ENST00000337907 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
RERE-201ENST00000337907 FGD1P98174 961 aa16.54■□□□□ 0.24
RERE-201ENST00000337907 TPRNQ4KMQ1 711 aa16.52■□□□□ 0.24
RERE-201ENST00000337907 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
RERE-201ENST00000337907 NAP1L5Q96NT1 182 aaPredicted RBP16.51■□□□□ 0.23
RERE-201ENST00000337907 KIAA2012Q0VF49 1180 aa16.5■□□□□ 0.23
RERE-201ENST00000337907 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
RERE-201ENST00000337907 PLCB2Q00722 1185 aa16.49■□□□□ 0.23
RERE-201ENST00000337907 OS9Q13438 667 aaPredicted RBP16.47■□□□□ 0.23
RERE-201ENST00000337907 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
RERE-201ENST00000337907 KCNJ4P48050 445 aa16.46■□□□□ 0.23
RERE-201ENST00000337907 EIF4G2P78344 907 aaKnown RBP eCLIP16.46■□□□□ 0.232e-7■■■■■ 34.4
RERE-201ENST00000337907 GOLGA6L4A6NEF3 574 aa16.45■□□□□ 0.22
RERE-201ENST00000337907 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
RERE-201ENST00000337907 NAP1L2Q9ULW6 460 aaPredicted RBP16.45■□□□□ 0.22
RERE-201ENST00000337907 CHIC2Q9UKJ5 165 aa16.44■□□□□ 0.22
RERE-201ENST00000337907 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
RERE-201ENST00000337907 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
RERE-201ENST00000337907 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
RERE-201ENST00000337907 MS4A1P11836 297 aa16.42■□□□□ 0.22
RERE-201ENST00000337907 KNSTRNQ9Y448 316 aa16.41■□□□□ 0.22
RERE-201ENST00000337907 NOC3LQ8WTT2 800 aaKnown RBP16.41■□□□□ 0.22
RERE-201ENST00000337907 MTUS2Q5JR59 1369 aa16.41■□□□□ 0.22
RERE-201ENST00000337907 NUDCQ9Y266 331 aa16.39■□□□□ 0.21
RERE-201ENST00000337907 ARID4BQ4LE39 1312 aaPredicted RBP16.39■□□□□ 0.21
RERE-201ENST00000337907 MCCP23508 829 aa16.38■□□□□ 0.21
RERE-201ENST00000337907 DRC7Q8IY82 874 aa16.38■□□□□ 0.21
RERE-201ENST00000337907 PRM3Q9NNZ6 103 aa16.38■□□□□ 0.21
RERE-201ENST00000337907 LAS1LQ9Y4W2 734 aaKnown RBP16.38■□□□□ 0.21
RERE-201ENST00000337907 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
RERE-201ENST00000337907 IRX6P78412 446 aaPredicted RBP16.38■□□□□ 0.21
RERE-201ENST00000337907 MSNP26038 577 aaKnown RBP16.37■□□□□ 0.21
RERE-201ENST00000337907 GNL2Q13823 731 aaKnown RBP16.36■□□□□ 0.21
RERE-201ENST00000337907 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.21
RERE-201ENST00000337907 HSCBQ8IWL3 235 aa16.31■□□□□ 0.2
RERE-201ENST00000337907 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
RERE-201ENST00000337907 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
RERE-201ENST00000337907 USP35Q9P2H5 1018 aa16.29■□□□□ 0.2
RERE-201ENST00000337907 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
RERE-201ENST00000337907 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
RERE-201ENST00000337907 PTMSP20962 102 aa16.27■□□□□ 0.2
RERE-201ENST00000337907 TMX4Q9H1E5 349 aaPredicted RBP16.27■□□□□ 0.19
RERE-201ENST00000337907 POGKQ9P215 609 aa16.26■□□□□ 0.19
RERE-201ENST00000337907 A0A0U1RQG5 324 aaPredicted RBP16.25■□□□□ 0.19
RERE-201ENST00000337907 GOLGA6L1Q8N7Z2 621 aa16.24■□□□□ 0.19
RERE-201ENST00000337907 TPM4P67936 248 aa16.23■□□□□ 0.19
RERE-201ENST00000337907 HTATSF1O43719 755 aaKnown RBP16.23■□□□□ 0.19
RERE-201ENST00000337907 CCDC34Q96HJ3 373 aa16.22■□□□□ 0.19
RERE-201ENST00000337907 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.19
RERE-201ENST00000337907 SCRIBQ14160 1630 aa16.21■□□□□ 0.18
RERE-201ENST00000337907 KIAA1211Q6ZU35 1233 aa16.19■□□□□ 0.18
RERE-201ENST00000337907 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
RERE-201ENST00000337907 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
RERE-201ENST00000337907 RGS3P49796 1198 aa16.19■□□□□ 0.18
RERE-201ENST00000337907 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
RERE-201ENST00000337907 RGL3Q3MIN7 710 aa16.18■□□□□ 0.18
RERE-201ENST00000337907 KCNH8Q96L42 1107 aa16.18■□□□□ 0.18
RERE-201ENST00000337907 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
RERE-201ENST00000337907 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
RERE-201ENST00000337907 TNNT3P45378 269 aaPredicted RBP16.17■□□□□ 0.18
RERE-201ENST00000337907 HDGFP51858 240 aaKnown RBP16.17■□□□□ 0.18
RERE-201ENST00000337907 SYAP1Q96A49 352 aaPredicted RBP16.15■□□□□ 0.18
RERE-201ENST00000337907 RRP7BPQ9NSQ0 103 aa16.15■□□□□ 0.18
RERE-201ENST00000337907 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
RERE-201ENST00000337907 CEP89Q96ST8 783 aa16.14■□□□□ 0.17
RERE-201ENST00000337907 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.17
RERE-201ENST00000337907 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
RERE-201ENST00000337907 PPP4R2Q9NY27 417 aa16.11■□□□□ 0.17
RERE-201ENST00000337907 KRI1Q8N9T8 703 aaKnown RBP16.11■□□□□ 0.17
RERE-201ENST00000337907 HIRIP3Q9BW71 556 aaPredicted RBP16.11■□□□□ 0.17
RERE-201ENST00000337907 GBP4Q96PP9 640 aa16.11■□□□□ 0.17
RERE-201ENST00000337907 RTN4Q9NQC3 1192 aaKnown RBP16.11■□□□□ 0.17
RERE-201ENST00000337907 KANK1Q14678 1352 aa16.09■□□□□ 0.17
RERE-201ENST00000337907 SUPT16HQ9Y5B9 1047 aaKnown RBP16.09■□□□□ 0.17
RERE-201ENST00000337907 GPATCH3Q96I76 525 aa16.09■□□□□ 0.17
RERE-201ENST00000337907 SETQ01105 290 aaPredicted RBP16.09■□□□□ 0.17
RERE-201ENST00000337907 CSPP1Q1MSJ5 1256 aa16.08■□□□□ 0.17
RERE-201ENST00000337907 MIER1Q8N108 512 aa16.08■□□□□ 0.16
RERE-201ENST00000337907 CHMP4AQ9BY43 222 aa16.07■□□□□ 0.16
RERE-201ENST00000337907 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
RERE-201ENST00000337907 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms