RNA–Protein interactions for RNA: ENST00000336665.9

AGAP1-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AGAP1, Length 5,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-202ENST00000336665 RSF1Q96T23 1441 aaPredicted RBP34.14■■■■□ 3.06
AGAP1-202ENST00000336665 EIF4G2P78344 907 aaKnown RBP eCLIP34.08■■■■□ 3.055e-7■■■■■ 42.1
AGAP1-202ENST00000336665 CFAP53Q96M91 514 aa34.08■■■■□ 3.05
AGAP1-202ENST00000336665 CDCA8Q53HL2 280 aa34.06■■■■□ 3.04
AGAP1-202ENST00000336665 RRP7BPQ9NSQ0 103 aa34.03■■■■□ 3.04
AGAP1-202ENST00000336665 SENP3Q9H4L4 574 aaPredicted RBP34.02■■■■□ 3.04
AGAP1-202ENST00000336665 CLIP1P30622 1438 aa33.98■■■■□ 3.03
AGAP1-202ENST00000336665 ZCCHC6Q5VYS8 1495 aaKnown RBP33.93■■■■□ 3.02
AGAP1-202ENST00000336665 ARXQ96QS3 562 aa33.93■■■■□ 3.02
AGAP1-202ENST00000336665 CFDP1Q9UEE9 299 aaPredicted RBP33.91■■■■□ 3.02
AGAP1-202ENST00000336665 RGL3Q3MIN7 710 aa33.9■■■■□ 3.02
AGAP1-202ENST00000336665 NCLP19338 710 aaKnown RBP33.86■■■■□ 3.01
AGAP1-202ENST00000336665 RB1CC1Q8TDY2 1594 aa33.84■■■■□ 3.01
AGAP1-202ENST00000336665 KNSTRNQ9Y448 316 aa33.84■■■■□ 3.01
AGAP1-202ENST00000336665 DCAF1Q9Y4B6 1507 aa33.8■■■■□ 3
AGAP1-202ENST00000336665 EIF5BO60841 1220 aaKnown RBP33.8■■■■□ 3
AGAP1-202ENST00000336665 PPM1GO15355 546 aaPredicted RBP33.79■■■■□ 3
AGAP1-202ENST00000336665 LMOD2Q6P5Q4 547 aa33.78■■■■□ 3
AGAP1-202ENST00000336665 POGKQ9P215 609 aa33.77■■■■□ 3
AGAP1-202ENST00000336665 EEA1Q15075 1411 aa33.77■■■■□ 3
AGAP1-202ENST00000336665 BECN1Q14457 450 aa33.75■■■□□ 2.99
AGAP1-202ENST00000336665 NUDCQ9Y266 331 aa33.74■■■□□ 2.99
AGAP1-202ENST00000336665 NPHP1O15259 732 aa33.73■■■□□ 2.99
AGAP1-202ENST00000336665 ERCC6Q03468 1493 aa33.72■■■□□ 2.99
AGAP1-202ENST00000336665 MAPK8IP3Q9UPT6 1336 aa33.72■■■□□ 2.99
AGAP1-202ENST00000336665 CASC1Q6TDU7 716 aa33.72■■■□□ 2.99
AGAP1-202ENST00000336665 GOLGA6L22H0YM25 854 aa33.68■■■□□ 2.98
AGAP1-202ENST00000336665 ZRSR1Q15695 479 aaKnown RBP33.66■■■□□ 2.98
AGAP1-202ENST00000336665 GOLGA3Q08378 1498 aa33.66■■■□□ 2.98
AGAP1-202ENST00000336665 HIRIP3Q9BW71 556 aaPredicted RBP33.65■■■□□ 2.98
AGAP1-202ENST00000336665 CARD11Q9BXL7 1154 aa33.64■■■□□ 2.98
AGAP1-202ENST00000336665 HDGFP51858 240 aaKnown RBP33.64■■■□□ 2.98
AGAP1-202ENST00000336665 DDRGK1Q96HY6 314 aa33.62■■■□□ 2.97
AGAP1-202ENST00000336665 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
AGAP1-202ENST00000336665 FTSJ3Q8IY81 847 aaKnown RBP33.62■■■□□ 2.97
AGAP1-202ENST00000336665 ANP32EQ9BTT0 268 aa33.61■■■□□ 2.97
AGAP1-202ENST00000336665 TRHP20396 242 aaPredicted RBP33.58■■■□□ 2.97
AGAP1-202ENST00000336665 BAZ1BQ9UIG0 1483 aaKnown RBP33.58■■■□□ 2.97
AGAP1-202ENST00000336665 GLIPR1L2Q4G1C9 344 aa33.56■■■□□ 2.96
AGAP1-202ENST00000336665 CHMP4BQ9H444 224 aaKnown RBP33.56■■■□□ 2.96
AGAP1-202ENST00000336665 NBR1Q14596 966 aa33.53■■■□□ 2.96
AGAP1-202ENST00000336665 LAS1LQ9Y4W2 734 aaKnown RBP33.52■■■□□ 2.96
AGAP1-202ENST00000336665 PNNQ9H307 717 aaKnown RBP33.51■■■□□ 2.95
AGAP1-202ENST00000336665 WRNQ14191 1432 aaPredicted RBP eCLIP33.51■■■□□ 2.95
AGAP1-202ENST00000336665 CCDC180Q9P1Z9 1646 aa33.5■■■□□ 2.95
AGAP1-202ENST00000336665 IRX6P78412 446 aaPredicted RBP33.5■■■□□ 2.95
AGAP1-202ENST00000336665 KANK1Q14678 1352 aa33.49■■■□□ 2.95
AGAP1-202ENST00000336665 NEUROD2Q15784 382 aa33.43■■■□□ 2.94
AGAP1-202ENST00000336665 MS4A1P11836 297 aa33.41■■■□□ 2.94
AGAP1-202ENST00000336665 GOLGA2Q08379 1002 aa33.4■■■□□ 2.94
AGAP1-202ENST00000336665 OS9Q13438 667 aaPredicted RBP33.4■■■□□ 2.94
AGAP1-202ENST00000336665 TRIM44Q96DX7 344 aaPredicted RBP33.39■■■□□ 2.94
AGAP1-202ENST00000336665 CCNB3Q8WWL7 1395 aa33.39■■■□□ 2.94
AGAP1-202ENST00000336665 CEP162Q5TB80 1403 aa33.39■■■□□ 2.94
AGAP1-202ENST00000336665 TULP1O00294 542 aaPredicted RBP33.34■■■□□ 2.93
AGAP1-202ENST00000336665 MIER1Q8N108 512 aa33.34■■■□□ 2.93
AGAP1-202ENST00000336665 U2SURPO15042 1029 aaKnown RBP33.32■■■□□ 2.92
AGAP1-202ENST00000336665 MLECQ14165 292 aa33.31■■■□□ 2.92
AGAP1-202ENST00000336665 CEP164Q9UPV0 1460 aa33.3■■■□□ 2.92
AGAP1-202ENST00000336665 FGD1P98174 961 aa33.3■■■□□ 2.92
AGAP1-202ENST00000336665 TNNT2P45379 298 aaPredicted RBP33.27■■■□□ 2.92
AGAP1-202ENST00000336665 PTMAP06454 111 aaKnown RBP33.26■■■□□ 2.92
AGAP1-202ENST00000336665 TMF1P82094 1093 aa33.26■■■□□ 2.92
AGAP1-202ENST00000336665 NACADO15069 1562 aa33.24■■■□□ 2.91
AGAP1-202ENST00000336665 KCNJ4P48050 445 aa33.22■■■□□ 2.91
AGAP1-202ENST00000336665 FRAT1Q92837 279 aaPredicted RBP33.21■■■□□ 2.91
AGAP1-202ENST00000336665 SRPK2P78362 688 aaKnown RBP33.2■■■□□ 2.91
AGAP1-202ENST00000336665 FHAD1B1AJZ9 1412 aa33.18■■■□□ 2.9
AGAP1-202ENST00000336665 TNIKQ9UKE5 1360 aa33.17■■■□□ 2.9
AGAP1-202ENST00000336665 CC2D1BQ5T0F9 858 aaKnown RBP33.14■■■□□ 2.9
AGAP1-202ENST00000336665 DCAF11Q8TEB1 546 aa33.11■■■□□ 2.89
AGAP1-202ENST00000336665 GOLGA6L6A8MZA4 724 aa33.09■■■□□ 2.89
AGAP1-202ENST00000336665 SOX12O15370 315 aa33.09■■■□□ 2.89
AGAP1-202ENST00000336665 RTF1Q92541 710 aaKnown RBP33.08■■■□□ 2.89
AGAP1-202ENST00000336665 TPRNQ4KMQ1 711 aa33.08■■■□□ 2.89
AGAP1-202ENST00000336665 NAP1L2Q9ULW6 460 aaPredicted RBP33.08■■■□□ 2.89
AGAP1-202ENST00000336665 EIF4G1Q04637 1599 aaKnown RBP33.08■■■□□ 2.89
AGAP1-202ENST00000336665 TAOK2Q9UL54 1235 aa33.08■■■□□ 2.89
AGAP1-202ENST00000336665 SENP3-EIF4A1A0A087X0R7 540 aa33.07■■■□□ 2.88
AGAP1-202ENST00000336665 MORC1Q86VD1 984 aa33.05■■■□□ 2.88
AGAP1-202ENST00000336665 GGT6Q6P531 493 aa33.05■■■□□ 2.88
AGAP1-202ENST00000336665 HDGFL2Q7Z4V5 671 aaPredicted RBP33.04■■■□□ 2.88
AGAP1-202ENST00000336665 NRDCO43847 1150 aa33.02■■■□□ 2.88
AGAP1-202ENST00000336665 RGS3P49796 1198 aa33.01■■■□□ 2.87
AGAP1-202ENST00000336665 DNTTIP2Q5QJE6 756 aaKnown RBP33.01■■■□□ 2.87
AGAP1-202ENST00000336665 CARMIL1Q5VZK9 1371 aa32.99■■■□□ 2.87
AGAP1-202ENST00000336665 CARMIL2Q6F5E8 1435 aa32.99■■■□□ 2.87
AGAP1-202ENST00000336665 HSP90AB1P08238 724 aaKnown RBP32.98■■■□□ 2.87
AGAP1-202ENST00000336665 SUPT16HQ9Y5B9 1047 aaKnown RBP32.97■■■□□ 2.87
AGAP1-202ENST00000336665 CFAP44Q96MT7 982 aa32.97■■■□□ 2.87
AGAP1-202ENST00000336665 MCCP23508 829 aa32.95■■■□□ 2.87
AGAP1-202ENST00000336665 SAFB2Q14151 953 aaKnown RBP eCLIP32.95■■■□□ 2.874e-6■■□□□ 14
AGAP1-202ENST00000336665 CSB-PGBD3P0DP91 1061 aa32.95■■■□□ 2.86
AGAP1-202ENST00000336665 SIN3AQ96ST3 1273 aa32.94■■■□□ 2.86
AGAP1-202ENST00000336665 GOLGA6L4A6NEF3 574 aa32.94■■■□□ 2.86
AGAP1-202ENST00000336665 ISY1Q9ULR0 285 aaKnown RBP32.93■■■□□ 2.86
AGAP1-202ENST00000336665 TMX4Q9H1E5 349 aaPredicted RBP32.92■■■□□ 2.86
AGAP1-202ENST00000336665 CHMP4AQ9BY43 222 aa32.92■■■□□ 2.86
AGAP1-202ENST00000336665 CUX2O14529 1486 aa32.91■■■□□ 2.86
AGAP1-202ENST00000336665 PLCB2Q00722 1185 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms