RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 DDX10Q13206 875 aaKnown RBP24.28■■□□□ 1.48
SYNM-202ENST00000336292 SOX12O15370 315 aa24.27■■□□□ 1.48
SYNM-202ENST00000336292 RRP7BPQ9NSQ0 103 aa24.26■■□□□ 1.47
SYNM-202ENST00000336292 HNRNPUQ00839 825 aaKnown RBP eCLIP24.24■■□□□ 1.47
SYNM-202ENST00000336292 ANP32AP39687 249 aaKnown RBP24.22■■□□□ 1.47
SYNM-202ENST00000336292 LAS1LQ9Y4W2 734 aaKnown RBP24.21■■□□□ 1.47
SYNM-202ENST00000336292 ERCC6Q03468 1493 aa24.2■■□□□ 1.46
SYNM-202ENST00000336292 CDK11BP21127 795 aaKnown RBP24.18■■□□□ 1.46
SYNM-202ENST00000336292 IRX6P78412 446 aaPredicted RBP24.15■■□□□ 1.46
SYNM-202ENST00000336292 TNNT2P45379 298 aaPredicted RBP24.13■■□□□ 1.45
SYNM-202ENST00000336292 UPF2Q9HAU5 1272 aaKnown RBP24.13■■□□□ 1.45
SYNM-202ENST00000336292 FKBP8Q14318 412 aa24.12■■□□□ 1.45
SYNM-202ENST00000336292 ANP32BQ92688 251 aaKnown RBP24.09■■□□□ 1.45
SYNM-202ENST00000336292 MTUS2Q5JR59 1369 aa24.08■■□□□ 1.44
SYNM-202ENST00000336292 MYH16Q9H6N6 1097 aa24.06■■□□□ 1.44
SYNM-202ENST00000336292 NEUROD2Q15784 382 aa24.03■■□□□ 1.44
SYNM-202ENST00000336292 SAFB2Q14151 953 aaKnown RBP eCLIP23.99■■□□□ 1.43
SYNM-202ENST00000336292 POGKQ9P215 609 aa23.98■■□□□ 1.43
SYNM-202ENST00000336292 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.98■■□□□ 1.43
SYNM-202ENST00000336292 PLEKHD1A6NEE1 506 aa23.97■■□□□ 1.43
SYNM-202ENST00000336292 CCDC9Q9Y3X0 531 aaKnown RBP23.97■■□□□ 1.43
SYNM-202ENST00000336292 AMER1Q5JTC6 1135 aaPredicted RBP23.97■■□□□ 1.43
SYNM-202ENST00000336292 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.97■■□□□ 1.43
SYNM-202ENST00000336292 NBR1Q14596 966 aa23.96■■□□□ 1.43
SYNM-202ENST00000336292 ISY1Q9ULR0 285 aaKnown RBP23.93■■□□□ 1.42
SYNM-202ENST00000336292 EIF5BO60841 1220 aaKnown RBP23.92■■□□□ 1.42
SYNM-202ENST00000336292 MRS2Q9HD23 443 aa23.91■■□□□ 1.42
SYNM-202ENST00000336292 CCDC136Q96JN2 1154 aa23.88■■□□□ 1.41
SYNM-202ENST00000336292 CLSTN1O94985 981 aa23.88■■□□□ 1.41
SYNM-202ENST00000336292 ZNF330Q9Y3S2 320 aaPredicted RBP23.88■■□□□ 1.41
SYNM-202ENST00000336292 GOLGA2Q08379 1002 aa23.87■■□□□ 1.41
SYNM-202ENST00000336292 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
SYNM-202ENST00000336292 PAK3O75914 559 aaPredicted RBP23.86■■□□□ 1.41
SYNM-202ENST00000336292 NAP1L2Q9ULW6 460 aaPredicted RBP23.86■■□□□ 1.41
SYNM-202ENST00000336292 STK26Q9P289 416 aa23.8■■□□□ 1.4
SYNM-202ENST00000336292 OS9Q13438 667 aaPredicted RBP23.76■■□□□ 1.39
SYNM-202ENST00000336292 U2SURPO15042 1029 aaKnown RBP23.76■■□□□ 1.39
SYNM-202ENST00000336292 CFDP1Q9UEE9 299 aaPredicted RBP23.76■■□□□ 1.39
SYNM-202ENST00000336292 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
SYNM-202ENST00000336292 NCLP19338 710 aaKnown RBP23.73■■□□□ 1.39
SYNM-202ENST00000336292 CC2D1BQ5T0F9 858 aaKnown RBP23.71■■□□□ 1.39
SYNM-202ENST00000336292 GGT6Q6P531 493 aa23.71■■□□□ 1.39
SYNM-202ENST00000336292 FTSJ3Q8IY81 847 aaKnown RBP23.69■■□□□ 1.38
SYNM-202ENST00000336292 KNSTRNQ9Y448 316 aa23.67■■□□□ 1.38
SYNM-202ENST00000336292 CFAP53Q96M91 514 aa23.66■■□□□ 1.38
SYNM-202ENST00000336292 CSB-PGBD3P0DP91 1061 aa23.66■■□□□ 1.38
SYNM-202ENST00000336292 SRPK2P78362 688 aaKnown RBP23.65■■□□□ 1.38
SYNM-202ENST00000336292 ZCCHC6Q5VYS8 1495 aaKnown RBP23.64■■□□□ 1.38
SYNM-202ENST00000336292 MAPK8IP3Q9UPT6 1336 aa23.63■■□□□ 1.37
SYNM-202ENST00000336292 FRAT1Q92837 279 aaPredicted RBP23.62■■□□□ 1.37
SYNM-202ENST00000336292 NUTM2DQ5VT03 806 aaPredicted RBP23.6■■□□□ 1.37
SYNM-202ENST00000336292 CARD11Q9BXL7 1154 aa23.6■■□□□ 1.37
SYNM-202ENST00000336292 PHF23Q9BUL5 403 aaPredicted RBP23.59■■□□□ 1.37
SYNM-202ENST00000336292 FGD1P98174 961 aa23.59■■□□□ 1.37
SYNM-202ENST00000336292 EIF4G2P78344 907 aaKnown RBP eCLIP23.59■■□□□ 1.37
SYNM-202ENST00000336292 NUTM2FA1L443 756 aa23.57■■□□□ 1.36
SYNM-202ENST00000336292 ZRSR1Q15695 479 aaKnown RBP23.57■■□□□ 1.36
SYNM-202ENST00000336292 KCNJ4P48050 445 aa23.53■■□□□ 1.36
SYNM-202ENST00000336292 ANO8Q9HCE9 1232 aaPredicted RBP23.53■■□□□ 1.36
SYNM-202ENST00000336292 PLCB2Q00722 1185 aa23.5■■□□□ 1.35
SYNM-202ENST00000336292 MSH5O43196 834 aa23.49■■□□□ 1.35
SYNM-202ENST00000336292 KLHL34Q8N239 644 aa23.49■■□□□ 1.35
SYNM-202ENST00000336292 APBB1O00213 710 aa23.49■■□□□ 1.35
SYNM-202ENST00000336292 CASC1Q6TDU7 716 aa23.48■■□□□ 1.35
SYNM-202ENST00000336292 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
SYNM-202ENST00000336292 G3V3G9 751 aa23.45■■□□□ 1.34
SYNM-202ENST00000336292 DCAF8Q5TAQ9 597 aa23.45■■□□□ 1.34
SYNM-202ENST00000336292 ACIN1Q9UKV3 1341 aaKnown RBP23.44■■□□□ 1.34
SYNM-202ENST00000336292 TMX4Q9H1E5 349 aaPredicted RBP23.42■■□□□ 1.34
SYNM-202ENST00000336292 NUDCQ9Y266 331 aa23.42■■□□□ 1.34
SYNM-202ENST00000336292 DCAF11Q8TEB1 546 aa23.41■■□□□ 1.34
SYNM-202ENST00000336292 CHMP3Q9Y3E7 222 aa23.4■■□□□ 1.34
SYNM-202ENST00000336292 CLIP1P30622 1438 aa23.4■■□□□ 1.34
SYNM-202ENST00000336292 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
SYNM-202ENST00000336292 MEX3CQ5U5Q3 659 aaKnown RBP23.39■■□□□ 1.34
SYNM-202ENST00000336292 LTV1Q96GA3 475 aaPredicted RBP23.38■■□□□ 1.33
SYNM-202ENST00000336292 RGS3P49796 1198 aa23.38■■□□□ 1.33
SYNM-202ENST00000336292 RSF1Q96T23 1441 aaPredicted RBP23.38■■□□□ 1.33
SYNM-202ENST00000336292 PRM3Q9NNZ6 103 aa23.36■■□□□ 1.33
SYNM-202ENST00000336292 RTF1Q92541 710 aaKnown RBP23.36■■□□□ 1.33
SYNM-202ENST00000336292 HDGFP51858 240 aaKnown RBP23.35■■□□□ 1.33
SYNM-202ENST00000336292 PTMAP06454 111 aaKnown RBP23.34■■□□□ 1.33
SYNM-202ENST00000336292 PDE4CQ08493 712 aa23.33■■□□□ 1.33
SYNM-202ENST00000336292 FOXD1Q16676 465 aa23.33■■□□□ 1.33
SYNM-202ENST00000336292 KANK1Q14678 1352 aa23.33■■□□□ 1.32
SYNM-202ENST00000336292 CDCA8Q53HL2 280 aa23.32■■□□□ 1.32
SYNM-202ENST00000336292 SIN3AQ96ST3 1273 aa23.32■■□□□ 1.32
SYNM-202ENST00000336292 SPRYD3Q8NCJ5 442 aa23.31■■□□□ 1.32
SYNM-202ENST00000336292 MIER1Q8N108 512 aa23.31■■□□□ 1.32
SYNM-202ENST00000336292 DNTTIP2Q5QJE6 756 aaKnown RBP23.27■■□□□ 1.32
SYNM-202ENST00000336292 CYB5RLQ6IPT4 315 aa23.26■■□□□ 1.31
SYNM-202ENST00000336292 BECN1Q14457 450 aa23.25■■□□□ 1.31
SYNM-202ENST00000336292 MORC1Q86VD1 984 aa23.23■■□□□ 1.31
SYNM-202ENST00000336292 CCNB3Q8WWL7 1395 aa23.22■■□□□ 1.31
SYNM-202ENST00000336292 TRIM44Q96DX7 344 aaPredicted RBP23.22■■□□□ 1.31
SYNM-202ENST00000336292 TAF7LQ5H9L4 462 aa23.21■■□□□ 1.31
SYNM-202ENST00000336292 EVA1CP58658 441 aa23.2■■□□□ 1.3
SYNM-202ENST00000336292 GNL2Q13823 731 aaKnown RBP23.2■■□□□ 1.3
SYNM-202ENST00000336292 GOLGA6L22H0YM25 854 aa23.19■■□□□ 1.3
SYNM-202ENST00000336292 SUPT16HQ9Y5B9 1047 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms