RNA–Protein interactions for RNA: ENST00000330276.4

SV2B-201, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SV2B, Length 11,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-201ENST00000330276 VSIG10Q8N0Z9 540 aa7.69□□□□□ -1.18
SV2B-201ENST00000330276 DDX10Q13206 875 aaKnown RBP7.69□□□□□ -1.18
SV2B-201ENST00000330276 HSP90AA2PQ14568 343 aaPredicted RBP7.67□□□□□ -1.18
SV2B-201ENST00000330276 ZRSR1Q15695 479 aaKnown RBP7.67□□□□□ -1.18
SV2B-201ENST00000330276 GOLGA6L6A8MZA4 724 aa7.67□□□□□ -1.18
SV2B-201ENST00000330276 ZBTB7CA1YPR0 619 aa7.67□□□□□ -1.18
SV2B-201ENST00000330276 PNNQ9H307 717 aaKnown RBP7.66□□□□□ -1.18
SV2B-201ENST00000330276 PLCB2Q00722 1185 aa7.66□□□□□ -1.18
SV2B-201ENST00000330276 NRDCO43847 1150 aa7.65□□□□□ -1.18
SV2B-201ENST00000330276 PLPPR3Q6T4P5 718 aa7.65□□□□□ -1.18
SV2B-201ENST00000330276 PODXL2Q9NZ53 605 aa7.65□□□□□ -1.18
SV2B-201ENST00000330276 RSPH6AQ9H0K4 717 aa7.64□□□□□ -1.19
SV2B-201ENST00000330276 SUPT16HQ9Y5B9 1047 aaKnown RBP7.63□□□□□ -1.19
SV2B-201ENST00000330276 MYH16Q9H6N6 1097 aa7.63□□□□□ -1.19
SV2B-201ENST00000330276 PRKCSHP14314 528 aaPredicted RBP7.62□□□□□ -1.19
SV2B-201ENST00000330276 PKNOX2Q96KN3 472 aa7.62□□□□□ -1.19
SV2B-201ENST00000330276 CCDC180Q9P1Z9 1646 aa7.61□□□□□ -1.19
SV2B-201ENST00000330276 TMC1Q8TDI8 760 aa7.61□□□□□ -1.19
SV2B-201ENST00000330276 SENP3-EIF4A1A0A087X0R7 540 aa7.61□□□□□ -1.19
SV2B-201ENST00000330276 TIMELESSQ9UNS1 1208 aa7.61□□□□□ -1.19
SV2B-201ENST00000330276 APPP05067 770 aa7.6□□□□□ -1.19
SV2B-201ENST00000330276 RBM19Q9Y4C8 960 aaKnown RBP7.6□□□□□ -1.19
SV2B-201ENST00000330276 MRS2Q9HD23 443 aa7.6□□□□□ -1.19
SV2B-201ENST00000330276 SETQ01105 290 aaPredicted RBP7.59□□□□□ -1.19
SV2B-201ENST00000330276 HSP90AB1P08238 724 aaKnown RBP7.59□□□□□ -1.19
SV2B-201ENST00000330276 DRC7Q8IY82 874 aa7.59□□□□□ -1.19
SV2B-201ENST00000330276 DCAF1Q9Y4B6 1507 aa7.59□□□□□ -1.19
SV2B-201ENST00000330276 TONSLQ96HA7 1378 aa7.59□□□□□ -1.19
SV2B-201ENST00000330276 KIAA2012Q0VF49 1180 aa7.57□□□□□ -1.2
SV2B-201ENST00000330276 TULP1O00294 542 aaPredicted RBP7.56□□□□□ -1.2
SV2B-201ENST00000330276 GOLGA6L1Q8N7Z2 621 aa7.56□□□□□ -1.2
SV2B-201ENST00000330276 WDR43Q15061 677 aaKnown RBP eCLIP7.56□□□□□ -1.2
SV2B-201ENST00000330276 SPRYD3Q8NCJ5 442 aa7.56□□□□□ -1.2
SV2B-201ENST00000330276 PPP4R2Q9NY27 417 aa7.56□□□□□ -1.2
SV2B-201ENST00000330276 CASC1Q6TDU7 716 aa7.56□□□□□ -1.2
SV2B-201ENST00000330276 ARID3CA6NKF2 412 aa7.55□□□□□ -1.2
SV2B-201ENST00000330276 GZF1Q9H116 711 aaPredicted RBP7.54□□□□□ -1.2
SV2B-201ENST00000330276 HIRIP3Q9BW71 556 aaPredicted RBP7.54□□□□□ -1.2
SV2B-201ENST00000330276 B4GALNT3Q6L9W6 998 aa7.53□□□□□ -1.2
SV2B-201ENST00000330276 RGS3P49796 1198 aa7.53□□□□□ -1.2
SV2B-201ENST00000330276 ZNF771Q7L3S4 317 aaPredicted RBP7.53□□□□□ -1.2
SV2B-201ENST00000330276 PLEKHG5O94827 1062 aa7.53□□□□□ -1.2
SV2B-201ENST00000330276 HSCBQ8IWL3 235 aa7.53□□□□□ -1.2
SV2B-201ENST00000330276 NOC3LQ8WTT2 800 aaKnown RBP7.53□□□□□ -1.2
SV2B-201ENST00000330276 A0A0G2JS52 829 aa7.52□□□□□ -1.21
SV2B-201ENST00000330276 TAOK2Q9UL54 1235 aa7.51□□□□□ -1.21
SV2B-201ENST00000330276 SENP3Q9H4L4 574 aaPredicted RBP7.5□□□□□ -1.21
SV2B-201ENST00000330276 USP35Q9P2H5 1018 aa7.5□□□□□ -1.21
SV2B-201ENST00000330276 GOLGA6L3A6NEY3 463 aa7.5□□□□□ -1.21
SV2B-201ENST00000330276 GOLGA6L4A6NEF3 574 aa7.48□□□□□ -1.21
SV2B-201ENST00000330276 TSHZ2Q9NRE2 1034 aa7.48□□□□□ -1.21
SV2B-201ENST00000330276 FTSJ3Q8IY81 847 aaKnown RBP7.48□□□□□ -1.21
SV2B-201ENST00000330276 FBLN2P98095 1184 aa7.47□□□□□ -1.21
SV2B-201ENST00000330276 GBP4Q96PP9 640 aa7.47□□□□□ -1.21
SV2B-201ENST00000330276 ANO8Q9HCE9 1232 aaPredicted RBP7.46□□□□□ -1.22
SV2B-201ENST00000330276 PATL2C9JE40 543 aaKnown RBP7.45□□□□□ -1.22
SV2B-201ENST00000330276 SLKQ9H2G2 1235 aaPredicted RBP7.44□□□□□ -1.22
SV2B-201ENST00000330276 NOM1Q5C9Z4 860 aaKnown RBP7.44□□□□□ -1.22
SV2B-201ENST00000330276 FAM13BQ9NYF5 915 aa7.43□□□□□ -1.22
SV2B-201ENST00000330276 NCBP3Q53F19 620 aaKnown RBP7.43□□□□□ -1.22
SV2B-201ENST00000330276 P3H3Q8IVL6 736 aa7.43□□□□□ -1.22
SV2B-201ENST00000330276 IPO9Q96P70 1041 aaKnown RBP7.43□□□□□ -1.22
SV2B-201ENST00000330276 NAP1L2Q9ULW6 460 aaPredicted RBP7.42□□□□□ -1.22
SV2B-201ENST00000330276 HTATSF1O43719 755 aaKnown RBP7.42□□□□□ -1.22
SV2B-201ENST00000330276 SYAP1Q96A49 352 aaPredicted RBP7.42□□□□□ -1.22
SV2B-201ENST00000330276 TAF7LQ5H9L4 462 aa7.42□□□□□ -1.22
SV2B-201ENST00000330276 TEX35Q5T0J7 233 aa7.41□□□□□ -1.22
SV2B-201ENST00000330276 STK11IPQ8N1F8 1099 aa7.41□□□□□ -1.22
SV2B-201ENST00000330276 FGD1P98174 961 aa7.41□□□□□ -1.22
SV2B-201ENST00000330276 CHGAP10645 457 aaKnown RBP7.4□□□□□ -1.23
SV2B-201ENST00000330276 ZNF777Q9ULD5 760 aaPredicted RBP7.4□□□□□ -1.23
SV2B-201ENST00000330276 GPS2Q13227 327 aa7.39□□□□□ -1.23
SV2B-201ENST00000330276 RRP12Q5JTH9 1297 aaKnown RBP7.39□□□□□ -1.23
SV2B-201ENST00000330276 KDM2AQ9Y2K7 1162 aa7.39□□□□□ -1.23
SV2B-201ENST00000330276 KCNJ4P48050 445 aa7.38□□□□□ -1.23
SV2B-201ENST00000330276 GSE1Q14687 1217 aa7.38□□□□□ -1.23
SV2B-201ENST00000330276 CLSTN1O94985 981 aa7.37□□□□□ -1.23
SV2B-201ENST00000330276 MAP7D2Q96T17 732 aa7.37□□□□□ -1.23
SV2B-201ENST00000330276 PHF14O94880 888 aa7.37□□□□□ -1.23
SV2B-201ENST00000330276 FRAT1Q92837 279 aaPredicted RBP7.37□□□□□ -1.23
SV2B-201ENST00000330276 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.37□□□□□ -1.23
SV2B-201ENST00000330276 TPM4P67936 248 aa7.36□□□□□ -1.23
SV2B-201ENST00000330276 GON4LQ3T8J9 2241 aa7.36□□□□□ -1.23
SV2B-201ENST00000330276 MCCP23508 829 aa7.36□□□□□ -1.23
SV2B-201ENST00000330276 PDE4CQ08493 712 aa7.36□□□□□ -1.23
SV2B-201ENST00000330276 MAPK8IP2Q13387 824 aaPredicted RBP7.36□□□□□ -1.23
SV2B-201ENST00000330276 CCAR2Q8N163 923 aaKnown RBP7.35□□□□□ -1.23
SV2B-201ENST00000330276 CWC15Q9P013 229 aaKnown RBP7.35□□□□□ -1.23
SV2B-201ENST00000330276 MTERF4Q7Z6M4 381 aaKnown RBP7.35□□□□□ -1.23
SV2B-201ENST00000330276 CCDC66A2RUB6 948 aa7.35□□□□□ -1.23
SV2B-201ENST00000330276 EIF4G2P78344 907 aaKnown RBP eCLIP7.35□□□□□ -1.23
SV2B-201ENST00000330276 STAG3Q9UJ98 1225 aa7.35□□□□□ -1.23
SV2B-201ENST00000330276 CALD1Q05682 793 aaKnown RBP7.34□□□□□ -1.23
SV2B-201ENST00000330276 RDXP35241 583 aaKnown RBP7.34□□□□□ -1.23
SV2B-201ENST00000330276 CSPP1Q1MSJ5 1256 aa7.34□□□□□ -1.23
SV2B-201ENST00000330276 MEX3CQ5U5Q3 659 aaKnown RBP7.34□□□□□ -1.24
SV2B-201ENST00000330276 GNL2Q13823 731 aaKnown RBP7.33□□□□□ -1.24
SV2B-201ENST00000330276 ZNF592Q92610 1267 aa7.33□□□□□ -1.24
SV2B-201ENST00000330276 KAT6BQ8WYB5 2073 aa7.33□□□□□ -1.24
SV2B-201ENST00000330276 DDX11L8A8MPP1 907 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms