RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 CLCN6P51797 869 aa4.92□□□□□ -1.62
CCDC144A-201ENST00000328495 SPOCK2Q92563 424 aa4.92□□□□□ -1.62
CCDC144A-201ENST00000328495 DCAF8Q5TAQ9 597 aa4.89□□□□□ -1.63
CCDC144A-201ENST00000328495 PHF12Q96QT6 1004 aa4.89□□□□□ -1.63
CCDC144A-201ENST00000328495 CCDC61Q9Y6R9 512 aa4.89□□□□□ -1.63
CCDC144A-201ENST00000328495 GSE1Q14687 1217 aa4.89□□□□□ -1.63
CCDC144A-201ENST00000328495 GABBR2O75899 941 aa4.88□□□□□ -1.63
CCDC144A-201ENST00000328495 CIZ1Q9ULV3 898 aaPredicted RBP4.86□□□□□ -1.63
CCDC144A-201ENST00000328495 KIF12Q96FN5 646 aa4.85□□□□□ -1.63
CCDC144A-201ENST00000328495 GALR2O43603 387 aaPredicted RBP4.84□□□□□ -1.63
CCDC144A-201ENST00000328495 MS4A3Q96HJ5 214 aa4.84□□□□□ -1.63
CCDC144A-201ENST00000328495 MAP3K13O43283 966 aa4.83□□□□□ -1.64
CCDC144A-201ENST00000328495 SGIP1Q9BQI5 828 aa4.83□□□□□ -1.64
CCDC144A-201ENST00000328495 PYGBP11216 843 aa4.83□□□□□ -1.64
CCDC144A-201ENST00000328495 TRIM41Q8WV44 630 aa4.83□□□□□ -1.64
CCDC144A-201ENST00000328495 DCBLD2Q96PD2 775 aa4.82□□□□□ -1.64
CCDC144A-201ENST00000328495 PCDHB13Q9Y5F0 798 aa4.82□□□□□ -1.64
CCDC144A-201ENST00000328495 CHRM1P11229 460 aaPredicted RBP4.81□□□□□ -1.64
CCDC144A-201ENST00000328495 ZNF467Q7Z7K2 595 aaPredicted RBP4.79□□□□□ -1.64
CCDC144A-201ENST00000328495 IFNL1Q8IU54 200 aa4.79□□□□□ -1.64
CCDC144A-201ENST00000328495 TIE1P35590 1138 aa4.78□□□□□ -1.64
CCDC144A-201ENST00000328495 POTEIP0CG38 1075 aa4.76□□□□□ -1.65
CCDC144A-201ENST00000328495 PCDHB8Q9UN66 801 aa4.76□□□□□ -1.65
CCDC144A-201ENST00000328495 ASTLQ6HA08 431 aaPredicted RBP4.76□□□□□ -1.65
CCDC144A-201ENST00000328495 TRPC6Q9Y210 931 aa4.76□□□□□ -1.65
CCDC144A-201ENST00000328495 BMP2KQ9NSY1 1161 aaPredicted RBP4.76□□□□□ -1.65
CCDC144A-201ENST00000328495 ATMINO43313 823 aaPredicted RBP4.75□□□□□ -1.65
CCDC144A-201ENST00000328495 ECM2O94769 699 aaPredicted RBP4.75□□□□□ -1.65
CCDC144A-201ENST00000328495 TTLL13PA6NNM8 815 aa4.74□□□□□ -1.65
CCDC144A-201ENST00000328495 TMEM106CQ9BVX2 250 aa4.74□□□□□ -1.65
CCDC144A-201ENST00000328495 ATN1P54259 1190 aaPredicted RBP4.73□□□□□ -1.65
CCDC144A-201ENST00000328495 PDAP1Q13442 181 aaKnown RBP4.73□□□□□ -1.65
CCDC144A-201ENST00000328495 PKD2Q13563 968 aa4.73□□□□□ -1.65
CCDC144A-201ENST00000328495 ILDR1Q86SU0 546 aaPredicted RBP4.73□□□□□ -1.65
CCDC144A-201ENST00000328495 RIOK3O14730 519 aaKnown RBP4.73□□□□□ -1.65
CCDC144A-201ENST00000328495 PSEN1P49768 467 aa4.73□□□□□ -1.65
CCDC144A-201ENST00000328495 TAOK2Q9UL54 1235 aa4.73□□□□□ -1.65
CCDC144A-201ENST00000328495 SLC39A7Q92504 469 aa4.72□□□□□ -1.65
CCDC144A-201ENST00000328495 TRIM35Q9UPQ4 493 aa4.71□□□□□ -1.65
CCDC144A-201ENST00000328495 VGFO15240 615 aaPredicted RBP4.71□□□□□ -1.66
CCDC144A-201ENST00000328495 PELP1Q8IZL8 1130 aaKnown RBP4.71□□□□□ -1.66
CCDC144A-201ENST00000328495 RNF25Q96BH1 459 aaPredicted RBP4.71□□□□□ -1.66
CCDC144A-201ENST00000328495 C7P10643 843 aa4.71□□□□□ -1.66
CCDC144A-201ENST00000328495 GOLGA2Q08379 1002 aa4.7□□□□□ -1.66
CCDC144A-201ENST00000328495 METRNQ9UJH8 293 aa4.7□□□□□ -1.66
CCDC144A-201ENST00000328495 IER5LQ5T953 404 aa4.7□□□□□ -1.66
CCDC144A-201ENST00000328495 RGL2O15211 777 aa4.68□□□□□ -1.66
CCDC144A-201ENST00000328495 MKRN3Q13064 507 aaKnown RBP4.68□□□□□ -1.66
CCDC144A-201ENST00000328495 AMER1Q5JTC6 1135 aaPredicted RBP4.68□□□□□ -1.66
CCDC144A-201ENST00000328495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.67□□□□□ -1.66
CCDC144A-201ENST00000328495 SEC24BO95487 1268 aa4.67□□□□□ -1.66
CCDC144A-201ENST00000328495 ZFP91Q96JP5 570 aaPredicted RBP4.67□□□□□ -1.66
CCDC144A-201ENST00000328495 CABP2Q9NPB3 220 aa4.67□□□□□ -1.66
CCDC144A-201ENST00000328495 PLCG2P16885 1265 aa4.66□□□□□ -1.66
CCDC144A-201ENST00000328495 LHX8Q68G74 356 aa4.66□□□□□ -1.66
CCDC144A-201ENST00000328495 STK25O00506 426 aa4.65□□□□□ -1.67
CCDC144A-201ENST00000328495 BCL11BQ9C0K0 894 aaPredicted RBP4.65□□□□□ -1.67
CCDC144A-201ENST00000328495 IRX5P78411 483 aaPredicted RBP4.64□□□□□ -1.67
CCDC144A-201ENST00000328495 STK24Q9Y6E0 443 aa4.64□□□□□ -1.67
CCDC144A-201ENST00000328495 OCEL1Q9H607 264 aa4.64□□□□□ -1.67
CCDC144A-201ENST00000328495 COLQQ9Y215 455 aaPredicted RBP4.64□□□□□ -1.67
CCDC144A-201ENST00000328495 POTEFA5A3E0 1075 aa4.63□□□□□ -1.67
CCDC144A-201ENST00000328495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.63□□□□□ -1.67
CCDC144A-201ENST00000328495 EFCAB3Q8N7B9 438 aa4.62□□□□□ -1.67
CCDC144A-201ENST00000328495 DCAF8L2P0C7V8 631 aa4.62□□□□□ -1.67
CCDC144A-201ENST00000328495 RTN4Q9NQC3 1192 aaKnown RBP4.62□□□□□ -1.67
CCDC144A-201ENST00000328495 SOX12O15370 315 aa4.61□□□□□ -1.67
CCDC144A-201ENST00000328495 MAMSTRQ6ZN01 415 aa4.61□□□□□ -1.67
CCDC144A-201ENST00000328495 POTEB2H3BUK9 544 aa4.61□□□□□ -1.67
CCDC144A-201ENST00000328495 HS6ST3Q8IZP7 471 aa4.61□□□□□ -1.67
CCDC144A-201ENST00000328495 PDCD7Q8N8D1 485 aaKnown RBP4.6□□□□□ -1.67
CCDC144A-201ENST00000328495 SCUBE2Q9NQ36 999 aa4.6□□□□□ -1.67
CCDC144A-201ENST00000328495 CHGAP10645 457 aaKnown RBP4.6□□□□□ -1.67
CCDC144A-201ENST00000328495 L3MBTL3Q96JM7 780 aaPredicted RBP4.59□□□□□ -1.67
CCDC144A-201ENST00000328495 NLRP6P59044 892 aa4.59□□□□□ -1.68
CCDC144A-201ENST00000328495 G3V3G9 751 aa4.58□□□□□ -1.68
CCDC144A-201ENST00000328495 PHF8Q9UPP1 1060 aa4.57□□□□□ -1.68
CCDC144A-201ENST00000328495 POTEJP0CG39 1038 aa4.57□□□□□ -1.68
CCDC144A-201ENST00000328495 OTUD5Q96G74 571 aa4.56□□□□□ -1.68
CCDC144A-201ENST00000328495 C3orf67Q6ZVT6 689 aa4.56□□□□□ -1.68
CCDC144A-201ENST00000328495 MFRPQ9BY79 579 aa4.56□□□□□ -1.68
CCDC144A-201ENST00000328495 DPY19L2Q6NUT2 758 aa4.55□□□□□ -1.68
CCDC144A-201ENST00000328495 FBXO22Q8NEZ5 403 aa4.55□□□□□ -1.68
CCDC144A-201ENST00000328495 BOLA1Q9Y3E2 137 aa4.55□□□□□ -1.68
CCDC144A-201ENST00000328495 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.55□□□□□ -1.68
CCDC144A-201ENST00000328495 MS4A4AQ96JQ5 239 aa4.54□□□□□ -1.68
CCDC144A-201ENST00000328495 RYDENQ9NUL5 291 aaKnown RBP4.54□□□□□ -1.68
CCDC144A-201ENST00000328495 SLAIN1Q8ND83 568 aa4.53□□□□□ -1.68
CCDC144A-201ENST00000328495 MICALL2Q8IY33 904 aa4.52□□□□□ -1.69
CCDC144A-201ENST00000328495 TMEM121BQ9BXQ6 578 aaPredicted RBP4.51□□□□□ -1.69
CCDC144A-201ENST00000328495 NKX1-1Q15270 411 aaPredicted RBP4.51□□□□□ -1.69
CCDC144A-201ENST00000328495 BBXQ8WY36 941 aaPredicted RBP4.5□□□□□ -1.69
CCDC144A-201ENST00000328495 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.48□□□□□ -1.69
CCDC144A-201ENST00000328495 SNPHO15079 494 aa4.48□□□□□ -1.69
CCDC144A-201ENST00000328495 PPP1R37O75864 691 aa4.48□□□□□ -1.69
CCDC144A-201ENST00000328495 SOCS7O14512 581 aa4.47□□□□□ -1.69
CCDC144A-201ENST00000328495 GTPBP6O43824 516 aaPredicted RBP4.47□□□□□ -1.69
CCDC144A-201ENST00000328495 TMEM92Q6UXU6 159 aa4.45□□□□□ -1.7
CCDC144A-201ENST00000328495 TMC2Q8TDI7 906 aa4.45□□□□□ -1.7
CCDC144A-201ENST00000328495 SPRYD3Q8NCJ5 442 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms