RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 ISY1Q9ULR0 285 aaKnown RBP10.09□□□□□ -0.79
USP9X-201ENST00000324545 DNTTIP2Q5QJE6 756 aaKnown RBP10.09□□□□□ -0.79
USP9X-201ENST00000324545 PLCB2Q00722 1185 aa10.09□□□□□ -0.79
USP9X-201ENST00000324545 NAP1L5Q96NT1 182 aaPredicted RBP10.09□□□□□ -0.79
USP9X-201ENST00000324545 UPF2Q9HAU5 1272 aaKnown RBP10.09□□□□□ -0.79
USP9X-201ENST00000324545 NPHP1O15259 732 aa10.08□□□□□ -0.8
USP9X-201ENST00000324545 KDM2AQ9Y2K7 1162 aa10.08□□□□□ -0.8
USP9X-201ENST00000324545 LAS1LQ9Y4W2 734 aaKnown RBP10.08□□□□□ -0.8
USP9X-201ENST00000324545 HNRNPUQ00839 825 aaKnown RBP eCLIP10.06□□□□□ -0.8
USP9X-201ENST00000324545 SPRYD3Q8NCJ5 442 aa10.06□□□□□ -0.8
USP9X-201ENST00000324545 PABPN1Q86U42 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
USP9X-201ENST00000324545 GON4LQ3T8J9 2241 aa10.04□□□□□ -0.8
USP9X-201ENST00000324545 CCDC136Q96JN2 1154 aa10.03□□□□□ -0.8
USP9X-201ENST00000324545 PPM1GO15355 546 aaPredicted RBP10.02□□□□□ -0.8
USP9X-201ENST00000324545 HAP1P54257 671 aaPredicted RBP10.02□□□□□ -0.81
USP9X-201ENST00000324545 DDX10Q13206 875 aaKnown RBP10.01□□□□□ -0.81
USP9X-201ENST00000324545 LMOD2Q6P5Q4 547 aa9.99□□□□□ -0.81
USP9X-201ENST00000324545 MYH16Q9H6N6 1097 aa9.97□□□□□ -0.81
USP9X-201ENST00000324545 TRIM44Q96DX7 344 aaPredicted RBP9.97□□□□□ -0.81
USP9X-201ENST00000324545 CHIC2Q9UKJ5 165 aa9.97□□□□□ -0.81
USP9X-201ENST00000324545 TNNT2P45379 298 aaPredicted RBP9.95□□□□□ -0.82
USP9X-201ENST00000324545 ACIN1Q9UKV3 1341 aaKnown RBP9.95□□□□□ -0.82
USP9X-201ENST00000324545 ZRSR1Q15695 479 aaKnown RBP9.94□□□□□ -0.82
USP9X-201ENST00000324545 SOX12O15370 315 aa9.93□□□□□ -0.82
USP9X-201ENST00000324545 TMC1Q8TDI8 760 aa9.92□□□□□ -0.82
USP9X-201ENST00000324545 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
USP9X-201ENST00000324545 WDR43Q15061 677 aaKnown RBP eCLIP9.91□□□□□ -0.829e-7■■■□□ 16.2
USP9X-201ENST00000324545 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.91□□□□□ -0.82
USP9X-201ENST00000324545 PATL2C9JE40 543 aaKnown RBP9.9□□□□□ -0.82
USP9X-201ENST00000324545 NEUROD2Q15784 382 aa9.9□□□□□ -0.82
USP9X-201ENST00000324545 NOC3LQ8WTT2 800 aaKnown RBP9.89□□□□□ -0.83
USP9X-201ENST00000324545 FGD1P98174 961 aa9.89□□□□□ -0.83
USP9X-201ENST00000324545 APBB1O00213 710 aa9.87□□□□□ -0.83
USP9X-201ENST00000324545 RGS3P49796 1198 aa9.86□□□□□ -0.83
USP9X-201ENST00000324545 OS9Q13438 667 aaPredicted RBP9.86□□□□□ -0.83
USP9X-201ENST00000324545 CREBRFQ8IUR6 639 aa9.86□□□□□ -0.83
USP9X-201ENST00000324545 DRC7Q8IY82 874 aa9.85□□□□□ -0.83
USP9X-201ENST00000324545 GOLGA2Q08379 1002 aa9.84□□□□□ -0.83
USP9X-201ENST00000324545 PPP1R15AO75807 674 aaPredicted RBP9.83□□□□□ -0.84
USP9X-201ENST00000324545 MRS2Q9HD23 443 aa9.83□□□□□ -0.84
USP9X-201ENST00000324545 KCNJ4P48050 445 aa9.83□□□□□ -0.84
USP9X-201ENST00000324545 BCL11BQ9C0K0 894 aaPredicted RBP9.83□□□□□ -0.84
USP9X-201ENST00000324545 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
USP9X-201ENST00000324545 FTSJ3Q8IY81 847 aaKnown RBP9.8□□□□□ -0.84
USP9X-201ENST00000324545 HSP90AB1P08238 724 aaKnown RBP9.8□□□□□ -0.84
USP9X-201ENST00000324545 CCDC9Q9Y3X0 531 aaKnown RBP9.79□□□□□ -0.84
USP9X-201ENST00000324545 TONSLQ96HA7 1378 aa9.79□□□□□ -0.84
USP9X-201ENST00000324545 BECN1Q14457 450 aa9.78□□□□□ -0.84
USP9X-201ENST00000324545 FRAT1Q92837 279 aaPredicted RBP9.78□□□□□ -0.84
USP9X-201ENST00000324545 RGL3Q3MIN7 710 aa9.78□□□□□ -0.84
USP9X-201ENST00000324545 GOLGA6L22H0YM25 854 aa9.77□□□□□ -0.85
USP9X-201ENST00000324545 FOXD4L5Q5VV16 416 aaPredicted RBP9.77□□□□□ -0.85
USP9X-201ENST00000324545 FOXD4L4Q8WXT5 416 aaPredicted RBP9.77□□□□□ -0.85
USP9X-201ENST00000324545 PNNQ9H307 717 aaKnown RBP9.76□□□□□ -0.85
USP9X-201ENST00000324545 GZF1Q9H116 711 aaPredicted RBP9.76□□□□□ -0.85
USP9X-201ENST00000324545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.75□□□□□ -0.85
USP9X-201ENST00000324545 KCNH8Q96L42 1107 aa9.74□□□□□ -0.85
USP9X-201ENST00000324545 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
USP9X-201ENST00000324545 VPS53Q5VIR6 699 aa9.74□□□□□ -0.85
USP9X-201ENST00000324545 GNL2Q13823 731 aaKnown RBP9.74□□□□□ -0.85
USP9X-201ENST00000324545 A0A0U1RQG5 324 aaPredicted RBP9.73□□□□□ -0.85
USP9X-201ENST00000324545 NOL8Q76FK4 1167 aaKnown RBP9.73□□□□□ -0.85
USP9X-201ENST00000324545 CASC1Q6TDU7 716 aa9.73□□□□□ -0.85
USP9X-201ENST00000324545 KRI1Q8N9T8 703 aaKnown RBP9.72□□□□□ -0.85
USP9X-201ENST00000324545 SAFB2Q14151 953 aaKnown RBP eCLIP9.72□□□□□ -0.85
USP9X-201ENST00000324545 TAF7LQ5H9L4 462 aa9.72□□□□□ -0.85
USP9X-201ENST00000324545 MIER1Q8N108 512 aa9.72□□□□□ -0.85
USP9X-201ENST00000324545 RRP7BPQ9NSQ0 103 aa9.71□□□□□ -0.86
USP9X-201ENST00000324545 CC2D1BQ5T0F9 858 aaKnown RBP9.7□□□□□ -0.86
USP9X-201ENST00000324545 GOLGA6L4A6NEF3 574 aa9.69□□□□□ -0.86
USP9X-201ENST00000324545 DHX37Q8IY37 1157 aaKnown RBP9.69□□□□□ -0.86
USP9X-201ENST00000324545 SUPT16HQ9Y5B9 1047 aaKnown RBP9.69□□□□□ -0.86
USP9X-201ENST00000324545 GOLGA6L6A8MZA4 724 aa9.68□□□□□ -0.86
USP9X-201ENST00000324545 DDRGK1Q96HY6 314 aa9.68□□□□□ -0.86
USP9X-201ENST00000324545 U2SURPO15042 1029 aaKnown RBP9.67□□□□□ -0.86
USP9X-201ENST00000324545 B4GALNT3Q6L9W6 998 aa9.67□□□□□ -0.86
USP9X-201ENST00000324545 MLECQ14165 292 aa9.67□□□□□ -0.86
USP9X-201ENST00000324545 FOXD4L6Q3SYB3 417 aaPredicted RBP9.67□□□□□ -0.86
USP9X-201ENST00000324545 FOXD4L3Q6VB84 417 aaPredicted RBP9.67□□□□□ -0.86
USP9X-201ENST00000324545 HSP90B1P14625 803 aaKnown RBP9.67□□□□□ -0.86
USP9X-201ENST00000324545 CNKSR2Q8WXI2 1034 aa9.67□□□□□ -0.86
USP9X-201ENST00000324545 KIAA2012Q0VF49 1180 aa9.66□□□□□ -0.86
USP9X-201ENST00000324545 CHMP3Q9Y3E7 222 aa9.66□□□□□ -0.86
USP9X-201ENST00000324545 FBXW7Q969H0 707 aa9.66□□□□□ -0.86
USP9X-201ENST00000324545 L1TD1Q5T7N2 865 aaKnown RBP9.65□□□□□ -0.86
USP9X-201ENST00000324545 CHAF1AQ13111 956 aaPredicted RBP9.65□□□□□ -0.86
USP9X-201ENST00000324545 TNNT3P45378 269 aaPredicted RBP9.64□□□□□ -0.87
USP9X-201ENST00000324545 NPM1P06748 294 aaKnown RBP eCLIP9.64□□□□□ -0.87
USP9X-201ENST00000324545 KLHL34Q8N239 644 aa9.64□□□□□ -0.87
USP9X-201ENST00000324545 SAMD1Q6SPF0 538 aaPredicted RBP9.63□□□□□ -0.87
USP9X-201ENST00000324545 RAD21O60216 631 aa9.63□□□□□ -0.87
USP9X-201ENST00000324545 PTMSP20962 102 aa9.62□□□□□ -0.87
USP9X-201ENST00000324545 CCAR2Q8N163 923 aaKnown RBP9.62□□□□□ -0.87
USP9X-201ENST00000324545 MSNP26038 577 aaKnown RBP9.62□□□□□ -0.87
USP9X-201ENST00000324545 DEKP35659 375 aaKnown RBP9.61□□□□□ -0.87
USP9X-201ENST00000324545 SLKQ9H2G2 1235 aaPredicted RBP9.61□□□□□ -0.87
USP9X-201ENST00000324545 PES1O00541 588 aaKnown RBP9.61□□□□□ -0.87
USP9X-201ENST00000324545 ABCC9O60706 1549 aa9.61□□□□□ -0.87
USP9X-201ENST00000324545 PAK3O75914 559 aaPredicted RBP9.61□□□□□ -0.87
USP9X-201ENST00000324545 FOSBP53539 338 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms