RNA–Protein interactions for RNA: ENST00000319380.11

UBE2O-201, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2O, Length 5,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-201ENST00000319380 GOLGA6L22H0YM25 854 aa23.21■■□□□ 1.31
UBE2O-201ENST00000319380 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
UBE2O-201ENST00000319380 BECN1Q14457 450 aa23.19■■□□□ 1.3
UBE2O-201ENST00000319380 ANP32EQ9BTT0 268 aa23.19■■□□□ 1.3
UBE2O-201ENST00000319380 HAP1P54257 671 aaPredicted RBP23.18■■□□□ 1.3
UBE2O-201ENST00000319380 TRIM44Q96DX7 344 aaPredicted RBP23.17■■□□□ 1.3
UBE2O-201ENST00000319380 SCRIBQ14160 1630 aa23.13■■□□□ 1.29
UBE2O-201ENST00000319380 DDRGK1Q96HY6 314 aa23.09■■□□□ 1.29
UBE2O-201ENST00000319380 CFAP53Q96M91 514 aa23.05■■□□□ 1.28
UBE2O-201ENST00000319380 PTMAP06454 111 aaKnown RBP23.05■■□□□ 1.28
UBE2O-201ENST00000319380 TULP1O00294 542 aaPredicted RBP23.04■■□□□ 1.28
UBE2O-201ENST00000319380 CASC1Q6TDU7 716 aa23.03■■□□□ 1.28
UBE2O-201ENST00000319380 TNNT2P45379 298 aaPredicted RBP23.03■■□□□ 1.28
UBE2O-201ENST00000319380 MTUS2Q5JR59 1369 aa23.01■■□□□ 1.27
UBE2O-201ENST00000319380 DCAF1Q9Y4B6 1507 aa23.01■■□□□ 1.27
UBE2O-201ENST00000319380 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.27
UBE2O-201ENST00000319380 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
UBE2O-201ENST00000319380 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
UBE2O-201ENST00000319380 IRX6P78412 446 aaPredicted RBP22.96■■□□□ 1.27
UBE2O-201ENST00000319380 NPHP1O15259 732 aa22.94■■□□□ 1.26
UBE2O-201ENST00000319380 DNTTIP2Q5QJE6 756 aaKnown RBP22.94■■□□□ 1.26
UBE2O-201ENST00000319380 CDCA8Q53HL2 280 aa22.94■■□□□ 1.26
UBE2O-201ENST00000319380 PPM1GO15355 546 aaPredicted RBP22.91■■□□□ 1.26
UBE2O-201ENST00000319380 FTSJ3Q8IY81 847 aaKnown RBP22.9■■□□□ 1.26
UBE2O-201ENST00000319380 ARID4BQ4LE39 1312 aaPredicted RBP22.89■■□□□ 1.26
UBE2O-201ENST00000319380 KNSTRNQ9Y448 316 aa22.86■■□□□ 1.25
UBE2O-201ENST00000319380 KCNH8Q96L42 1107 aa22.86■■□□□ 1.25
UBE2O-201ENST00000319380 TPRNQ4KMQ1 711 aa22.85■■□□□ 1.25
UBE2O-201ENST00000319380 MAPK8IP3Q9UPT6 1336 aa22.84■■□□□ 1.25
UBE2O-201ENST00000319380 RGL3Q3MIN7 710 aa22.83■■□□□ 1.25
UBE2O-201ENST00000319380 FGD1P98174 961 aa22.83■■□□□ 1.25
UBE2O-201ENST00000319380 LMOD2Q6P5Q4 547 aa22.83■■□□□ 1.25
UBE2O-201ENST00000319380 NUDCQ9Y266 331 aa22.82■■□□□ 1.24
UBE2O-201ENST00000319380 GOLGA6L6A8MZA4 724 aa22.82■■□□□ 1.24
UBE2O-201ENST00000319380 PLEKHD1A6NEE1 506 aa22.81■■□□□ 1.24
UBE2O-201ENST00000319380 NRDCO43847 1150 aa22.81■■□□□ 1.24
UBE2O-201ENST00000319380 HIRIP3Q9BW71 556 aaPredicted RBP22.81■■□□□ 1.24
UBE2O-201ENST00000319380 RRP7BPQ9NSQ0 103 aa22.81■■□□□ 1.24
UBE2O-201ENST00000319380 CHMP4BQ9H444 224 aaKnown RBP22.79■■□□□ 1.24
UBE2O-201ENST00000319380 NACADO15069 1562 aa22.79■■□□□ 1.24
UBE2O-201ENST00000319380 LAS1LQ9Y4W2 734 aaKnown RBP22.78■■□□□ 1.24
UBE2O-201ENST00000319380 PLCB2Q00722 1185 aa22.77■■□□□ 1.24
UBE2O-201ENST00000319380 OS9Q13438 667 aaPredicted RBP22.77■■□□□ 1.24
UBE2O-201ENST00000319380 TAOK2Q9UL54 1235 aa22.77■■□□□ 1.24
UBE2O-201ENST00000319380 GOLGA2Q08379 1002 aa22.77■■□□□ 1.24
UBE2O-201ENST00000319380 ERICH6BQ5W0A0 696 aa22.77■■□□□ 1.24
UBE2O-201ENST00000319380 KCNJ4P48050 445 aa22.74■■□□□ 1.23
UBE2O-201ENST00000319380 RB1CC1Q8TDY2 1594 aa22.74■■□□□ 1.23
UBE2O-201ENST00000319380 NEUROD2Q15784 382 aa22.74■■□□□ 1.23
UBE2O-201ENST00000319380 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
UBE2O-201ENST00000319380 POGKQ9P215 609 aa22.72■■□□□ 1.23
UBE2O-201ENST00000319380 NAP1L2Q9ULW6 460 aaPredicted RBP22.69■■□□□ 1.22
UBE2O-201ENST00000319380 MS4A1P11836 297 aa22.69■■□□□ 1.22
UBE2O-201ENST00000319380 MIER1Q8N108 512 aa22.68■■□□□ 1.22
UBE2O-201ENST00000319380 GOLGA6L4A6NEF3 574 aa22.66■■□□□ 1.22
UBE2O-201ENST00000319380 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
UBE2O-201ENST00000319380 CARD11Q9BXL7 1154 aa22.65■■□□□ 1.22
UBE2O-201ENST00000319380 NCBP3Q53F19 620 aaKnown RBP22.64■■□□□ 1.22
UBE2O-201ENST00000319380 CLSTN1O94985 981 aa22.64■■□□□ 1.21
UBE2O-201ENST00000319380 HSP90AB1P08238 724 aaKnown RBP22.63■■□□□ 1.21
UBE2O-201ENST00000319380 FRAT1Q92837 279 aaPredicted RBP22.63■■□□□ 1.21
UBE2O-201ENST00000319380 NAP1L5Q96NT1 182 aaPredicted RBP22.62■■□□□ 1.21
UBE2O-201ENST00000319380 PNNQ9H307 717 aaKnown RBP22.62■■□□□ 1.21
UBE2O-201ENST00000319380 RGS3P49796 1198 aa22.61■■□□□ 1.21
UBE2O-201ENST00000319380 CFDP1Q9UEE9 299 aaPredicted RBP22.6■■□□□ 1.21
UBE2O-201ENST00000319380 SENP3-EIF4A1A0A087X0R7 540 aa22.58■■□□□ 1.21
UBE2O-201ENST00000319380 L1TD1Q5T7N2 865 aaKnown RBP22.58■■□□□ 1.21
UBE2O-201ENST00000319380 U2SURPO15042 1029 aaKnown RBP22.57■■□□□ 1.2
UBE2O-201ENST00000319380 ISY1Q9ULR0 285 aaKnown RBP22.55■■□□□ 1.2
UBE2O-201ENST00000319380 CHAF1AQ13111 956 aaPredicted RBP22.55■■□□□ 1.2
UBE2O-201ENST00000319380 CLIP1P30622 1438 aa22.54■■□□□ 1.2
UBE2O-201ENST00000319380 SUPT16HQ9Y5B9 1047 aaKnown RBP22.52■■□□□ 1.19
UBE2O-201ENST00000319380 MCCP23508 829 aa22.51■■□□□ 1.19
UBE2O-201ENST00000319380 HDGFP51858 240 aaKnown RBP22.48■■□□□ 1.19
UBE2O-201ENST00000319380 HSCBQ8IWL3 235 aa22.47■■□□□ 1.19
UBE2O-201ENST00000319380 PPP4R2Q9NY27 417 aa22.45■■□□□ 1.18
UBE2O-201ENST00000319380 CFAP44Q96MT7 982 aa22.45■■□□□ 1.18
UBE2O-201ENST00000319380 GNL2Q13823 731 aaKnown RBP22.43■■□□□ 1.18
UBE2O-201ENST00000319380 DRC7Q8IY82 874 aa22.41■■□□□ 1.18
UBE2O-201ENST00000319380 KIAA2012Q0VF49 1180 aa22.4■■□□□ 1.18
UBE2O-201ENST00000319380 CC2D1BQ5T0F9 858 aaKnown RBP22.4■■□□□ 1.18
UBE2O-201ENST00000319380 SOX12O15370 315 aa22.38■■□□□ 1.17
UBE2O-201ENST00000319380 MSNP26038 577 aaKnown RBP22.38■■□□□ 1.17
UBE2O-201ENST00000319380 RTF1Q92541 710 aaKnown RBP22.37■■□□□ 1.17
UBE2O-201ENST00000319380 TMF1P82094 1093 aa22.37■■□□□ 1.17
UBE2O-201ENST00000319380 NOP58Q9Y2X3 529 aaKnown RBP22.36■■□□□ 1.17
UBE2O-201ENST00000319380 SRPK2P78362 688 aaKnown RBP22.34■■□□□ 1.17
UBE2O-201ENST00000319380 KIAA1211Q6ZU35 1233 aa22.34■■□□□ 1.17
UBE2O-201ENST00000319380 TMX4Q9H1E5 349 aaPredicted RBP22.32■■□□□ 1.16
UBE2O-201ENST00000319380 RTN4Q9NQC3 1192 aaKnown RBP22.31■■□□□ 1.16
UBE2O-201ENST00000319380 MORC1Q86VD1 984 aa22.29■■□□□ 1.16
UBE2O-201ENST00000319380 KANK1Q14678 1352 aa22.29■■□□□ 1.16
UBE2O-201ENST00000319380 NOC3LQ8WTT2 800 aaKnown RBP22.28■■□□□ 1.16
UBE2O-201ENST00000319380 TRHP20396 242 aaPredicted RBP22.28■■□□□ 1.16
UBE2O-201ENST00000319380 HTATSF1O43719 755 aaKnown RBP22.27■■□□□ 1.16
UBE2O-201ENST00000319380 IPO8O15397 1037 aaKnown RBP22.26■■□□□ 1.15
UBE2O-201ENST00000319380 PRM3Q9NNZ6 103 aa22.26■■□□□ 1.15
UBE2O-201ENST00000319380 MLECQ14165 292 aa22.26■■□□□ 1.15
UBE2O-201ENST00000319380 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
UBE2O-201ENST00000319380 CCDC34Q96HJ3 373 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms