RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 NPM1P06748 294 aaKnown RBP eCLIP18.64■□□□□ 0.58
RAPH1-202ENST00000319170 C14orf37Q86TY3 774 aa18.64■□□□□ 0.57
RAPH1-202ENST00000319170 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.57
RAPH1-202ENST00000319170 GOLGA6L22H0YM25 854 aa18.64■□□□□ 0.57
RAPH1-202ENST00000319170 TNNT2P45379 298 aaPredicted RBP18.64■□□□□ 0.57
RAPH1-202ENST00000319170 TULP1O00294 542 aaPredicted RBP18.63■□□□□ 0.57
RAPH1-202ENST00000319170 PTMAP06454 111 aaKnown RBP18.63■□□□□ 0.57
RAPH1-202ENST00000319170 ZRSR1Q15695 479 aaKnown RBP18.62■□□□□ 0.57
RAPH1-202ENST00000319170 CASC1Q6TDU7 716 aa18.6■□□□□ 0.57
RAPH1-202ENST00000319170 DNTTIP2Q5QJE6 756 aaKnown RBP18.59■□□□□ 0.57
RAPH1-202ENST00000319170 HIRIP3Q9BW71 556 aaPredicted RBP18.58■□□□□ 0.56
RAPH1-202ENST00000319170 ANP32EQ9BTT0 268 aa18.56■□□□□ 0.56
RAPH1-202ENST00000319170 MIER1Q8N108 512 aa18.51■□□□□ 0.55
RAPH1-202ENST00000319170 FTSJ3Q8IY81 847 aaKnown RBP18.5■□□□□ 0.55
RAPH1-202ENST00000319170 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
RAPH1-202ENST00000319170 PPP1R15AO75807 674 aaPredicted RBP18.48■□□□□ 0.55
RAPH1-202ENST00000319170 NAP1L5Q96NT1 182 aaPredicted RBP18.48■□□□□ 0.55
RAPH1-202ENST00000319170 TAOK2Q9UL54 1235 aa18.47■□□□□ 0.55
RAPH1-202ENST00000319170 TSPY4P0CV99 314 aa18.46■□□□□ 0.55
RAPH1-202ENST00000319170 TSPY10P0CW01 314 aa18.46■□□□□ 0.55
RAPH1-202ENST00000319170 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
RAPH1-202ENST00000319170 EIF4G2P78344 907 aaKnown RBP eCLIP18.44■□□□□ 0.54
RAPH1-202ENST00000319170 SENP3-EIF4A1A0A087X0R7 540 aa18.44■□□□□ 0.54
RAPH1-202ENST00000319170 HAP1P54257 671 aaPredicted RBP18.42■□□□□ 0.54
RAPH1-202ENST00000319170 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
RAPH1-202ENST00000319170 PPM1GO15355 546 aaPredicted RBP18.41■□□□□ 0.54
RAPH1-202ENST00000319170 GOLGA6L6A8MZA4 724 aa18.41■□□□□ 0.54
RAPH1-202ENST00000319170 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
RAPH1-202ENST00000319170 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
RAPH1-202ENST00000319170 RTN4Q9NQC3 1192 aaKnown RBP18.39■□□□□ 0.53
RAPH1-202ENST00000319170 PLCB2Q00722 1185 aa18.37■□□□□ 0.53
RAPH1-202ENST00000319170 HSP90AB1P08238 724 aaKnown RBP18.35■□□□□ 0.53
RAPH1-202ENST00000319170 KNSTRNQ9Y448 316 aa18.35■□□□□ 0.53
RAPH1-202ENST00000319170 NPHP1O15259 732 aa18.33■□□□□ 0.53
RAPH1-202ENST00000319170 ERICH6BQ5W0A0 696 aa18.33■□□□□ 0.52
RAPH1-202ENST00000319170 NAP1L2Q9ULW6 460 aaPredicted RBP18.31■□□□□ 0.52
RAPH1-202ENST00000319170 SUPT16HQ9Y5B9 1047 aaKnown RBP18.31■□□□□ 0.52
RAPH1-202ENST00000319170 CLIP1P30622 1438 aa18.31■□□□□ 0.52
RAPH1-202ENST00000319170 RGL3Q3MIN7 710 aa18.3■□□□□ 0.52
RAPH1-202ENST00000319170 OS9Q13438 667 aaPredicted RBP18.3■□□□□ 0.52
RAPH1-202ENST00000319170 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
RAPH1-202ENST00000319170 FGD1P98174 961 aa18.29■□□□□ 0.52
RAPH1-202ENST00000319170 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
RAPH1-202ENST00000319170 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
RAPH1-202ENST00000319170 RGS3P49796 1198 aa18.28■□□□□ 0.52
RAPH1-202ENST00000319170 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
RAPH1-202ENST00000319170 KCNH8Q96L42 1107 aa18.27■□□□□ 0.51
RAPH1-202ENST00000319170 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
RAPH1-202ENST00000319170 ARID4BQ4LE39 1312 aaPredicted RBP18.26■□□□□ 0.51
RAPH1-202ENST00000319170 NOP58Q9Y2X3 529 aaKnown RBP18.26■□□□□ 0.51
RAPH1-202ENST00000319170 CLSTN1O94985 981 aa18.25■□□□□ 0.51
RAPH1-202ENST00000319170 KCNJ4P48050 445 aa18.25■□□□□ 0.51
RAPH1-202ENST00000319170 CDCA8Q53HL2 280 aa18.25■□□□□ 0.51
RAPH1-202ENST00000319170 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
RAPH1-202ENST00000319170 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
RAPH1-202ENST00000319170 GOLGA2Q08379 1002 aa18.22■□□□□ 0.51
RAPH1-202ENST00000319170 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
RAPH1-202ENST00000319170 NRDCO43847 1150 aa18.21■□□□□ 0.51
RAPH1-202ENST00000319170 DRC7Q8IY82 874 aa18.2■□□□□ 0.5
RAPH1-202ENST00000319170 AMER1Q5JTC6 1135 aaPredicted RBP18.19■□□□□ 0.5
RAPH1-202ENST00000319170 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
RAPH1-202ENST00000319170 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
RAPH1-202ENST00000319170 LMOD2Q6P5Q4 547 aa18.18■□□□□ 0.5
RAPH1-202ENST00000319170 HSCBQ8IWL3 235 aa18.18■□□□□ 0.5
RAPH1-202ENST00000319170 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
RAPH1-202ENST00000319170 MSNP26038 577 aaKnown RBP18.17■□□□□ 0.5
RAPH1-202ENST00000319170 GOLGA6L4A6NEF3 574 aa18.17■□□□□ 0.5
RAPH1-202ENST00000319170 SPRYD3Q8NCJ5 442 aa18.15■□□□□ 0.5
RAPH1-202ENST00000319170 CHMP4BQ9H444 224 aaKnown RBP18.15■□□□□ 0.5
RAPH1-202ENST00000319170 PPP4R2Q9NY27 417 aa18.15■□□□□ 0.5
RAPH1-202ENST00000319170 NUDCQ9Y266 331 aa18.15■□□□□ 0.5
RAPH1-202ENST00000319170 POGKQ9P215 609 aa18.14■□□□□ 0.49
RAPH1-202ENST00000319170 CEP162Q5TB80 1403 aa18.11■□□□□ 0.49
RAPH1-202ENST00000319170 U2SURPO15042 1029 aaKnown RBP18.11■□□□□ 0.49
RAPH1-202ENST00000319170 MCCP23508 829 aa18.1■□□□□ 0.49
RAPH1-202ENST00000319170 MS4A1P11836 297 aa18.09■□□□□ 0.49
RAPH1-202ENST00000319170 PNNQ9H307 717 aaKnown RBP18.09■□□□□ 0.49
RAPH1-202ENST00000319170 PLEKHD1A6NEE1 506 aa18.09■□□□□ 0.49
RAPH1-202ENST00000319170 GNL2Q13823 731 aaKnown RBP18.08■□□□□ 0.49
RAPH1-202ENST00000319170 L1TD1Q5T7N2 865 aaKnown RBP18.07■□□□□ 0.48
RAPH1-202ENST00000319170 ISY1Q9ULR0 285 aaKnown RBP18.06■□□□□ 0.48
RAPH1-202ENST00000319170 B4GALNT3Q6L9W6 998 aa18.06■□□□□ 0.48
RAPH1-202ENST00000319170 MYO15BQ96JP2 1530 aa18.06■□□□□ 0.48
RAPH1-202ENST00000319170 KIAA2012Q0VF49 1180 aa18.04■□□□□ 0.48
RAPH1-202ENST00000319170 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
RAPH1-202ENST00000319170 NOC3LQ8WTT2 800 aaKnown RBP18.03■□□□□ 0.48
RAPH1-202ENST00000319170 EIF4G1Q04637 1599 aaKnown RBP18.02■□□□□ 0.47
RAPH1-202ENST00000319170 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
RAPH1-202ENST00000319170 ARID3AQ99856 593 aa17.99■□□□□ 0.47
RAPH1-202ENST00000319170 DEKP35659 375 aaKnown RBP17.99■□□□□ 0.47
RAPH1-202ENST00000319170 SOX12O15370 315 aa17.97■□□□□ 0.47
RAPH1-202ENST00000319170 KANK1Q14678 1352 aa17.94■□□□□ 0.46
RAPH1-202ENST00000319170 KIAA1211Q6ZU35 1233 aa17.94■□□□□ 0.46
RAPH1-202ENST00000319170 APBB1O00213 710 aa17.93■□□□□ 0.46
RAPH1-202ENST00000319170 TMF1P82094 1093 aa17.93■□□□□ 0.46
RAPH1-202ENST00000319170 EEA1Q15075 1411 aa17.91■□□□□ 0.46
RAPH1-202ENST00000319170 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
RAPH1-202ENST00000319170 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
RAPH1-202ENST00000319170 CFAP44Q96MT7 982 aa17.91■□□□□ 0.46
RAPH1-202ENST00000319170 PTMSP20962 102 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms