RNA–Protein interactions for RNA: ENST00000315066.5

CNTD1-201, Transcript of cyclin N-terminal domain containing 1, humanhuman

TSL 1 (best)

Gene CNTD1, Length 2,657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-201ENST00000315066 GSE1Q14687 1217 aa8.16□□□□□ -1.1
CNTD1-201ENST00000315066 AKT1S1Q96B36 256 aa8.15□□□□□ -1.1
CNTD1-201ENST00000315066 PRR29P0C7W0 189 aa8.14□□□□□ -1.11
CNTD1-201ENST00000315066 DCAF8Q5TAQ9 597 aa8.14□□□□□ -1.11
CNTD1-201ENST00000315066 NUBP1P53384 320 aa8.09□□□□□ -1.11
CNTD1-201ENST00000315066 TAOK2Q9UL54 1235 aa8.09□□□□□ -1.11
CNTD1-201ENST00000315066 KDM2AQ9Y2K7 1162 aa8.09□□□□□ -1.11
CNTD1-201ENST00000315066 FAM212AQ96EL1 285 aa8.08□□□□□ -1.12
CNTD1-201ENST00000315066 CCDC180Q9P1Z9 1646 aa8.08□□□□□ -1.12
CNTD1-201ENST00000315066 REM2Q8IYK8 340 aaPredicted RBP8.07□□□□□ -1.12
CNTD1-201ENST00000315066 HS6ST3Q8IZP7 471 aa8.07□□□□□ -1.12
CNTD1-201ENST00000315066 TSHZ2Q9NRE2 1034 aa8.06□□□□□ -1.12
CNTD1-201ENST00000315066 CREBZFQ9NS37 354 aa8.06□□□□□ -1.12
CNTD1-201ENST00000315066 RIOK3O14730 519 aaKnown RBP8.05□□□□□ -1.12
CNTD1-201ENST00000315066 RNF25Q96BH1 459 aaPredicted RBP8.04□□□□□ -1.12
CNTD1-201ENST00000315066 TTBK1Q5TCY1 1321 aaPredicted RBP8.03□□□□□ -1.12
CNTD1-201ENST00000315066 STK25O00506 426 aa7.99□□□□□ -1.13
CNTD1-201ENST00000315066 MNX1P50219 401 aaPredicted RBP7.99□□□□□ -1.13
CNTD1-201ENST00000315066 VGFO15240 615 aaPredicted RBP7.99□□□□□ -1.13
CNTD1-201ENST00000315066 RASEFQ8IZ41 740 aa7.98□□□□□ -1.13
CNTD1-201ENST00000315066 PITPNM1O00562 1244 aa7.97□□□□□ -1.13
CNTD1-201ENST00000315066 PRKCSHP14314 528 aaPredicted RBP7.97□□□□□ -1.13
CNTD1-201ENST00000315066 DNAJC5Q9H3Z4 198 aa7.96□□□□□ -1.13
CNTD1-201ENST00000315066 CHRM1P11229 460 aaPredicted RBP7.96□□□□□ -1.14
CNTD1-201ENST00000315066 PYGBP11216 843 aa7.95□□□□□ -1.14
CNTD1-201ENST00000315066 STK24Q9Y6E0 443 aa7.94□□□□□ -1.14
CNTD1-201ENST00000315066 NKX1-1Q15270 411 aaPredicted RBP7.93□□□□□ -1.14
CNTD1-201ENST00000315066 TPRNQ4KMQ1 711 aa7.92□□□□□ -1.14
CNTD1-201ENST00000315066 NBR1Q14596 966 aa7.92□□□□□ -1.14
CNTD1-201ENST00000315066 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
CNTD1-201ENST00000315066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.91□□□□□ -1.14
CNTD1-201ENST00000315066 ZFP91Q96JP5 570 aaPredicted RBP7.91□□□□□ -1.14
CNTD1-201ENST00000315066 GTPBP6O43824 516 aaPredicted RBP7.9□□□□□ -1.14
CNTD1-201ENST00000315066 RYDENQ9NUL5 291 aaKnown RBP7.9□□□□□ -1.15
CNTD1-201ENST00000315066 CHADLQ6NUI6 762 aa7.89□□□□□ -1.15
CNTD1-201ENST00000315066 SGIP1Q9BQI5 828 aa7.89□□□□□ -1.15
CNTD1-201ENST00000315066 TSPYL2Q9H2G4 693 aaPredicted RBP7.89□□□□□ -1.15
CNTD1-201ENST00000315066 PPARGC1BQ86YN6 1023 aaKnown RBP7.86□□□□□ -1.15
CNTD1-201ENST00000315066 ZNF467Q7Z7K2 595 aaPredicted RBP7.84□□□□□ -1.15
CNTD1-201ENST00000315066 FARP1Q9Y4F1 1045 aaPredicted RBP7.84□□□□□ -1.15
CNTD1-201ENST00000315066 PRKAR2AP13861 404 aaKnown RBP7.8□□□□□ -1.16
CNTD1-201ENST00000315066 PDAP1Q13442 181 aaKnown RBP7.79□□□□□ -1.16
CNTD1-201ENST00000315066 PAK3O75914 559 aaPredicted RBP7.78□□□□□ -1.16
CNTD1-201ENST00000315066 PCDHB8Q9UN66 801 aa7.78□□□□□ -1.16
CNTD1-201ENST00000315066 PCDHB13Q9Y5F0 798 aa7.78□□□□□ -1.16
CNTD1-201ENST00000315066 PSEN1P49768 467 aa7.75□□□□□ -1.17
CNTD1-201ENST00000315066 WDR70Q9NW82 654 aa7.75□□□□□ -1.17
CNTD1-201ENST00000315066 ZNF579Q8NAF0 562 aaKnown RBP7.74□□□□□ -1.17
CNTD1-201ENST00000315066 CCDC61Q9Y6R9 512 aa7.74□□□□□ -1.17
CNTD1-201ENST00000315066 PCGF6Q9BYE7 350 aa7.73□□□□□ -1.17
CNTD1-201ENST00000315066 P3H3Q8IVL6 736 aa7.72□□□□□ -1.17
CNTD1-201ENST00000315066 FXR2P51116 673 aaKnown RBP eCLIP7.72□□□□□ -1.17
CNTD1-201ENST00000315066 RB1CC1Q8TDY2 1594 aa7.7□□□□□ -1.18
CNTD1-201ENST00000315066 IFNL1Q8IU54 200 aa7.68□□□□□ -1.18
CNTD1-201ENST00000315066 MFRPQ9BY79 579 aa7.67□□□□□ -1.18
CNTD1-201ENST00000315066 MAP3K13O43283 966 aa7.67□□□□□ -1.18
CNTD1-201ENST00000315066 CHRDL2Q6WN34 429 aa7.67□□□□□ -1.18
CNTD1-201ENST00000315066 CADPS2Q86UW7 1296 aa7.66□□□□□ -1.18
CNTD1-201ENST00000315066 CABP2Q9NPB3 220 aa7.66□□□□□ -1.18
CNTD1-201ENST00000315066 NLRP6P59044 892 aa7.65□□□□□ -1.18
CNTD1-201ENST00000315066 PIP4P2Q8N4L2 257 aa7.65□□□□□ -1.18
CNTD1-201ENST00000315066 EFCAB3Q8N7B9 438 aa7.65□□□□□ -1.18
CNTD1-201ENST00000315066 KIF12Q96FN5 646 aa7.65□□□□□ -1.18
CNTD1-201ENST00000315066 NACADO15069 1562 aa7.64□□□□□ -1.19
CNTD1-201ENST00000315066 BCL11AQ9H165 835 aa7.64□□□□□ -1.19
CNTD1-201ENST00000315066 ZRANB1Q9UGI0 708 aa7.64□□□□□ -1.19
CNTD1-201ENST00000315066 SOX12O15370 315 aa7.63□□□□□ -1.19
CNTD1-201ENST00000315066 MYO15BQ96JP2 1530 aa7.62□□□□□ -1.19
CNTD1-201ENST00000315066 ACIN1Q9UKV3 1341 aaKnown RBP7.62□□□□□ -1.19
CNTD1-201ENST00000315066 KCNV2Q8TDN2 545 aa7.62□□□□□ -1.19
CNTD1-201ENST00000315066 PHF8Q9UPP1 1060 aa7.61□□□□□ -1.19
CNTD1-201ENST00000315066 CD44P16070 742 aaKnown RBP7.61□□□□□ -1.19
CNTD1-201ENST00000315066 GOLGA2Q08379 1002 aa7.61□□□□□ -1.19
CNTD1-201ENST00000315066 TULP1O00294 542 aaPredicted RBP7.6□□□□□ -1.19
CNTD1-201ENST00000315066 PPP1R37O75864 691 aa7.6□□□□□ -1.19
CNTD1-201ENST00000315066 ZEB1P37275 1124 aaPredicted RBP7.6□□□□□ -1.19
CNTD1-201ENST00000315066 CENPBP07199 599 aaPredicted RBP7.59□□□□□ -1.19
CNTD1-201ENST00000315066 FBXO22Q8NEZ5 403 aa7.59□□□□□ -1.19
CNTD1-201ENST00000315066 ZCCHC6Q5VYS8 1495 aaKnown RBP7.59□□□□□ -1.2
CNTD1-201ENST00000315066 DCAF1Q9Y4B6 1507 aa7.58□□□□□ -1.2
CNTD1-201ENST00000315066 PHF12Q96QT6 1004 aa7.57□□□□□ -1.2
CNTD1-201ENST00000315066 UNC13AQ9UPW8 1703 aa7.57□□□□□ -1.2
CNTD1-201ENST00000315066 ERICH6Q7L0X2 663 aa7.56□□□□□ -1.2
CNTD1-201ENST00000315066 E2F4Q16254 413 aa7.56□□□□□ -1.2
CNTD1-201ENST00000315066 LMOD2Q6P5Q4 547 aa7.55□□□□□ -1.2
CNTD1-201ENST00000315066 ARHGEF1Q92888 912 aaKnown RBP7.55□□□□□ -1.2
CNTD1-201ENST00000315066 TMEM106CQ9BVX2 250 aa7.55□□□□□ -1.2
CNTD1-201ENST00000315066 FAM9AQ8IZU1 332 aaPredicted RBP7.54□□□□□ -1.2
CNTD1-201ENST00000315066 NEUROD1Q13562 356 aa7.54□□□□□ -1.2
CNTD1-201ENST00000315066 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
CNTD1-201ENST00000315066 MKRN3Q13064 507 aaKnown RBP7.53□□□□□ -1.2
CNTD1-201ENST00000315066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.53□□□□□ -1.2
CNTD1-201ENST00000315066 SCRIBQ14160 1630 aa7.52□□□□□ -1.2
CNTD1-201ENST00000315066 PDE4AP27815 886 aa7.52□□□□□ -1.21
CNTD1-201ENST00000315066 LARP6Q9BRS8 491 aaKnown RBP7.52□□□□□ -1.21
CNTD1-201ENST00000315066 BICRAQ9NZM4 1560 aa7.51□□□□□ -1.21
CNTD1-201ENST00000315066 PLSCR2Q9NRY7 297 aa7.5□□□□□ -1.21
CNTD1-201ENST00000315066 MS4A3Q96HJ5 214 aa7.49□□□□□ -1.21
CNTD1-201ENST00000315066 MS4A4AQ96JQ5 239 aa7.49□□□□□ -1.21
CNTD1-201ENST00000315066 NCKAP5LQ9HCH0 1330 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms