RNA–Protein interactions for RNA: ENST00000313478.11

TRPM7-201, Transcript of transient receptor potential cation channel subfamily M member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM7, Length 10,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM7-201ENST00000313478 PHF23Q9BUL5 403 aaPredicted RBP9.07□□□□□ -0.96
TRPM7-201ENST00000313478 LAS1LQ9Y4W2 734 aaKnown RBP9.06□□□□□ -0.96
TRPM7-201ENST00000313478 CDK11AQ9UQ88 783 aaPredicted RBP9.05□□□□□ -0.96
TRPM7-201ENST00000313478 NUTM2DQ5VT03 806 aaPredicted RBP9.04□□□□□ -0.96
TRPM7-201ENST00000313478 IRX6P78412 446 aaPredicted RBP9.01□□□□□ -0.97
TRPM7-201ENST00000313478 STK26Q9P289 416 aa8.99□□□□□ -0.97
TRPM7-201ENST00000313478 KLHL34Q8N239 644 aa8.99□□□□□ -0.97
TRPM7-201ENST00000313478 CSRNP3Q8WYN3 585 aa8.99□□□□□ -0.97
TRPM7-201ENST00000313478 NUTM2FA1L443 756 aa8.98□□□□□ -0.97
TRPM7-201ENST00000313478 ZNF330Q9Y3S2 320 aaPredicted RBP8.98□□□□□ -0.97
TRPM7-201ENST00000313478 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
TRPM7-201ENST00000313478 TSPY4P0CV99 314 aa8.97□□□□□ -0.97
TRPM7-201ENST00000313478 TSPY10P0CW01 314 aa8.97□□□□□ -0.97
TRPM7-201ENST00000313478 DDX10Q13206 875 aaKnown RBP8.97□□□□□ -0.97
TRPM7-201ENST00000313478 NEUROD2Q15784 382 aa8.97□□□□□ -0.97
TRPM7-201ENST00000313478 GGT6Q6P531 493 aa8.95□□□□□ -0.98
TRPM7-201ENST00000313478 CYB5RLQ6IPT4 315 aa8.94□□□□□ -0.98
TRPM7-201ENST00000313478 EIF4G1Q04637 1599 aaKnown RBP8.92□□□□□ -0.98
TRPM7-201ENST00000313478 POGKQ9P215 609 aa8.92□□□□□ -0.98
TRPM7-201ENST00000313478 ISY1Q9ULR0 285 aaKnown RBP8.92□□□□□ -0.98
TRPM7-201ENST00000313478 ANO8Q9HCE9 1232 aaPredicted RBP8.91□□□□□ -0.98
TRPM7-201ENST00000313478 RTL5Q5HYW3 569 aaPredicted RBP8.91□□□□□ -0.98
TRPM7-201ENST00000313478 MSH5O43196 834 aa8.9□□□□□ -0.98
TRPM7-201ENST00000313478 PLEKHD1A6NEE1 506 aa8.9□□□□□ -0.98
TRPM7-201ENST00000313478 WDR43Q15061 677 aaKnown RBP eCLIP8.9□□□□□ -0.99
TRPM7-201ENST00000313478 HSP90AA1P07900 732 aaKnown RBP8.89□□□□□ -0.99
TRPM7-201ENST00000313478 MEX3CQ5U5Q3 659 aaKnown RBP8.88□□□□□ -0.99
TRPM7-201ENST00000313478 TONSLQ96HA7 1378 aa8.87□□□□□ -0.99
TRPM7-201ENST00000313478 MTUS2Q5JR59 1369 aa8.87□□□□□ -0.99
TRPM7-201ENST00000313478 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
TRPM7-201ENST00000313478 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRPM7-201ENST00000313478 CC2D1BQ5T0F9 858 aaKnown RBP8.85□□□□□ -0.99
TRPM7-201ENST00000313478 CLSTN1O94985 981 aa8.84□□□□□ -0.99
TRPM7-201ENST00000313478 NAP1L2Q9ULW6 460 aaPredicted RBP8.83□□□□□ -1
TRPM7-201ENST00000313478 U2SURPO15042 1029 aaKnown RBP8.83□□□□□ -1
TRPM7-201ENST00000313478 LTV1Q96GA3 475 aaPredicted RBP8.83□□□□□ -1
TRPM7-201ENST00000313478 GTF3C3Q9Y5Q9 886 aa8.83□□□□□ -1
TRPM7-201ENST00000313478 FOXD1Q16676 465 aa8.82□□□□□ -1
TRPM7-201ENST00000313478 FKBP8Q14318 412 aa8.81□□□□□ -1
TRPM7-201ENST00000313478 CFDP1Q9UEE9 299 aaPredicted RBP8.81□□□□□ -1
TRPM7-201ENST00000313478 SRPK2P78362 688 aaKnown RBP8.8□□□□□ -1
TRPM7-201ENST00000313478 PPP1R1BQ9UD71 204 aaPredicted RBP8.78□□□□□ -1
TRPM7-201ENST00000313478 GOLGA2Q08379 1002 aa8.78□□□□□ -1
TRPM7-201ENST00000313478 PIP4K2BP78356 416 aa8.78□□□□□ -1
TRPM7-201ENST00000313478 NBR1Q14596 966 aa8.77□□□□□ -1.01
TRPM7-201ENST00000313478 APBB1O00213 710 aa8.77□□□□□ -1.01
TRPM7-201ENST00000313478 OS9Q13438 667 aaPredicted RBP8.75□□□□□ -1.01
TRPM7-201ENST00000313478 ZCCHC6Q5VYS8 1495 aaKnown RBP8.75□□□□□ -1.01
TRPM7-201ENST00000313478 CECR2Q9BXF3 1484 aa8.75□□□□□ -1.01
TRPM7-201ENST00000313478 ZNF428Q96B54 188 aa8.74□□□□□ -1.01
TRPM7-201ENST00000313478 MRS2Q9HD23 443 aa8.74□□□□□ -1.01
TRPM7-201ENST00000313478 SIN3AQ96ST3 1273 aa8.73□□□□□ -1.01
TRPM7-201ENST00000313478 NUTM2BA6NNL0 878 aaPredicted RBP8.73□□□□□ -1.01
TRPM7-201ENST00000313478 NUTM2EB1AL46 878 aaPredicted RBP8.73□□□□□ -1.01
TRPM7-201ENST00000313478 NUTM2AQ8IVF1 878 aaPredicted RBP8.73□□□□□ -1.01
TRPM7-201ENST00000313478 FRAT1Q92837 279 aaPredicted RBP8.73□□□□□ -1.01
TRPM7-201ENST00000313478 NGEFQ8N5V2 710 aa8.73□□□□□ -1.01
TRPM7-201ENST00000313478 G3V3G9 751 aa8.72□□□□□ -1.01
TRPM7-201ENST00000313478 DCAF8Q5TAQ9 597 aa8.72□□□□□ -1.01
TRPM7-201ENST00000313478 SYTL4Q96C24 671 aaPredicted RBP8.72□□□□□ -1.01
TRPM7-201ENST00000313478 MYH16Q9H6N6 1097 aa8.71□□□□□ -1.01
TRPM7-201ENST00000313478 EVA1CP58658 441 aa8.71□□□□□ -1.02
TRPM7-201ENST00000313478 CHMP3Q9Y3E7 222 aa8.71□□□□□ -1.02
TRPM7-201ENST00000313478 CARD11Q9BXL7 1154 aa8.71□□□□□ -1.02
TRPM7-201ENST00000313478 FBXW7Q969H0 707 aa8.7□□□□□ -1.02
TRPM7-201ENST00000313478 HNRNPMP52272 730 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRPM7-201ENST00000313478 PDE4CQ08493 712 aa8.7□□□□□ -1.02
TRPM7-201ENST00000313478 CDK11BP21127 795 aaKnown RBP8.7□□□□□ -1.02
TRPM7-201ENST00000313478 DCAF11Q8TEB1 546 aa8.7□□□□□ -1.02
TRPM7-201ENST00000313478 BAZ1BQ9UIG0 1483 aaKnown RBP8.69□□□□□ -1.02
TRPM7-201ENST00000313478 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
TRPM7-201ENST00000313478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.68□□□□□ -1.02
TRPM7-201ENST00000313478 SAMD1Q6SPF0 538 aaPredicted RBP8.68□□□□□ -1.02
TRPM7-201ENST00000313478 RB1CC1Q8TDY2 1594 aa8.68□□□□□ -1.02
TRPM7-201ENST00000313478 NUTM2GQ5VZR2 741 aa8.68□□□□□ -1.02
TRPM7-201ENST00000313478 USP35Q9P2H5 1018 aa8.66□□□□□ -1.02
TRPM7-201ENST00000313478 SPRYD3Q8NCJ5 442 aa8.66□□□□□ -1.02
TRPM7-201ENST00000313478 TDRD9Q8NDG6 1382 aaKnown RBP8.66□□□□□ -1.02
TRPM7-201ENST00000313478 MAPK8IP3Q9UPT6 1336 aa8.65□□□□□ -1.02
TRPM7-201ENST00000313478 KNSTRNQ9Y448 316 aa8.65□□□□□ -1.02
TRPM7-201ENST00000313478 CCDC136Q96JN2 1154 aa8.65□□□□□ -1.02
TRPM7-201ENST00000313478 ANP32AP39687 249 aaKnown RBP8.65□□□□□ -1.03
TRPM7-201ENST00000313478 RAD21O60216 631 aa8.65□□□□□ -1.03
TRPM7-201ENST00000313478 FAM69CQ0P6D2 419 aa8.65□□□□□ -1.03
TRPM7-201ENST00000313478 NGDNQ8NEJ9 315 aaKnown RBP8.64□□□□□ -1.03
TRPM7-201ENST00000313478 KIF3BO15066 747 aa8.64□□□□□ -1.03
TRPM7-201ENST00000313478 FTSJ3Q8IY81 847 aaKnown RBP8.64□□□□□ -1.03
TRPM7-201ENST00000313478 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
TRPM7-201ENST00000313478 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.63□□□□□ -1.03
TRPM7-201ENST00000313478 UPF2Q9HAU5 1272 aaKnown RBP8.62□□□□□ -1.03
TRPM7-201ENST00000313478 CFAP53Q96M91 514 aa8.62□□□□□ -1.03
TRPM7-201ENST00000313478 WWC1Q8IX03 1113 aa8.62□□□□□ -1.03
TRPM7-201ENST00000313478 TMX4Q9H1E5 349 aaPredicted RBP8.61□□□□□ -1.03
TRPM7-201ENST00000313478 FAM177BA6PVY3 158 aa8.61□□□□□ -1.03
TRPM7-201ENST00000313478 FGD1P98174 961 aa8.61□□□□□ -1.03
TRPM7-201ENST00000313478 PRM3Q9NNZ6 103 aa8.61□□□□□ -1.03
TRPM7-201ENST00000313478 GTF2E1P29083 439 aaPredicted RBP8.6□□□□□ -1.03
TRPM7-201ENST00000313478 KCNJ4P48050 445 aa8.6□□□□□ -1.03
TRPM7-201ENST00000313478 PLCB2Q00722 1185 aa8.6□□□□□ -1.03
TRPM7-201ENST00000313478 RTF1Q92541 710 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms