RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 SUPT16HQ9Y5B9 1047 aaKnown RBP11.3□□□□□ -0.6
ERCC4-201ENST00000311895 ZBTB7CA1YPR0 619 aa11.29□□□□□ -0.6
ERCC4-201ENST00000311895 A0A0G2JS52 829 aa11.28□□□□□ -0.6
ERCC4-201ENST00000311895 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.6
ERCC4-201ENST00000311895 EIF4G2P78344 907 aaKnown RBP eCLIP11.27□□□□□ -0.61
ERCC4-201ENST00000311895 MYH16Q9H6N6 1097 aa11.27□□□□□ -0.61
ERCC4-201ENST00000311895 TRIM44Q96DX7 344 aaPredicted RBP11.27□□□□□ -0.61
ERCC4-201ENST00000311895 LAS1LQ9Y4W2 734 aaKnown RBP11.26□□□□□ -0.61
ERCC4-201ENST00000311895 ANP32EQ9BTT0 268 aa11.26□□□□□ -0.61
ERCC4-201ENST00000311895 RGL3Q3MIN7 710 aa11.24□□□□□ -0.61
ERCC4-201ENST00000311895 MTUS2Q5JR59 1369 aa11.24□□□□□ -0.61
ERCC4-201ENST00000311895 BECN1Q14457 450 aa11.24□□□□□ -0.61
ERCC4-201ENST00000311895 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
ERCC4-201ENST00000311895 TSPY4P0CV99 314 aa11.24□□□□□ -0.61
ERCC4-201ENST00000311895 TSPY10P0CW01 314 aa11.24□□□□□ -0.61
ERCC4-201ENST00000311895 C14orf37Q86TY3 774 aa11.21□□□□□ -0.61
ERCC4-201ENST00000311895 NEUROD2Q15784 382 aa11.2□□□□□ -0.62
ERCC4-201ENST00000311895 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
ERCC4-201ENST00000311895 PPM1GO15355 546 aaPredicted RBP11.19□□□□□ -0.62
ERCC4-201ENST00000311895 CLIP1P30622 1438 aa11.18□□□□□ -0.62
ERCC4-201ENST00000311895 RGS3P49796 1198 aa11.18□□□□□ -0.62
ERCC4-201ENST00000311895 PTMAP06454 111 aaKnown RBP11.18□□□□□ -0.62
ERCC4-201ENST00000311895 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
ERCC4-201ENST00000311895 DNTTIP2Q5QJE6 756 aaKnown RBP11.17□□□□□ -0.62
ERCC4-201ENST00000311895 NAP1L5Q96NT1 182 aaPredicted RBP11.17□□□□□ -0.62
ERCC4-201ENST00000311895 GOLGA6L22H0YM25 854 aa11.16□□□□□ -0.62
ERCC4-201ENST00000311895 B4GALNT3Q6L9W6 998 aa11.16□□□□□ -0.62
ERCC4-201ENST00000311895 KCNH8Q96L42 1107 aa11.16□□□□□ -0.62
ERCC4-201ENST00000311895 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
ERCC4-201ENST00000311895 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.62
ERCC4-201ENST00000311895 FTSJ3Q8IY81 847 aaKnown RBP11.14□□□□□ -0.63
ERCC4-201ENST00000311895 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
ERCC4-201ENST00000311895 TNNT2P45379 298 aaPredicted RBP11.14□□□□□ -0.63
ERCC4-201ENST00000311895 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
ERCC4-201ENST00000311895 FRAT1Q92837 279 aaPredicted RBP11.13□□□□□ -0.63
ERCC4-201ENST00000311895 NOP58Q9Y2X3 529 aaKnown RBP11.13□□□□□ -0.63
ERCC4-201ENST00000311895 CCDC180Q9P1Z9 1646 aa11.12□□□□□ -0.63
ERCC4-201ENST00000311895 KNSTRNQ9Y448 316 aa11.12□□□□□ -0.63
ERCC4-201ENST00000311895 CC2D1BQ5T0F9 858 aaKnown RBP11.11□□□□□ -0.63
ERCC4-201ENST00000311895 CARD11Q9BXL7 1154 aa11.11□□□□□ -0.63
ERCC4-201ENST00000311895 CHMP7Q8WUX9 453 aaPredicted RBP11.11□□□□□ -0.63
ERCC4-201ENST00000311895 CEP162Q5TB80 1403 aa11.1□□□□□ -0.63
ERCC4-201ENST00000311895 PPP1R15AO75807 674 aaPredicted RBP11.1□□□□□ -0.63
ERCC4-201ENST00000311895 PPP4R2Q9NY27 417 aa11.1□□□□□ -0.63
ERCC4-201ENST00000311895 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
ERCC4-201ENST00000311895 ZRSR1Q15695 479 aaKnown RBP11.08□□□□□ -0.64
ERCC4-201ENST00000311895 CASC1Q6TDU7 716 aa11.07□□□□□ -0.64
ERCC4-201ENST00000311895 CFAP53Q96M91 514 aa11.07□□□□□ -0.64
ERCC4-201ENST00000311895 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
ERCC4-201ENST00000311895 ARID4BQ4LE39 1312 aaPredicted RBP11.06□□□□□ -0.64
ERCC4-201ENST00000311895 HSP90AB1P08238 724 aaKnown RBP11.06□□□□□ -0.64
ERCC4-201ENST00000311895 RSF1Q96T23 1441 aaPredicted RBP11.05□□□□□ -0.64
ERCC4-201ENST00000311895 DEKP35659 375 aaKnown RBP11.04□□□□□ -0.64
ERCC4-201ENST00000311895 MAPK8IP3Q9UPT6 1336 aa11.02□□□□□ -0.64
ERCC4-201ENST00000311895 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.64
ERCC4-201ENST00000311895 GOLGA3Q08378 1498 aa11.02□□□□□ -0.65
ERCC4-201ENST00000311895 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
ERCC4-201ENST00000311895 PLEKHD1A6NEE1 506 aa11.01□□□□□ -0.65
ERCC4-201ENST00000311895 NAP1L2Q9ULW6 460 aaPredicted RBP11.01□□□□□ -0.65
ERCC4-201ENST00000311895 RBM19Q9Y4C8 960 aaKnown RBP11.01□□□□□ -0.65
ERCC4-201ENST00000311895 CFDP1Q9UEE9 299 aaPredicted RBP11.01□□□□□ -0.65
ERCC4-201ENST00000311895 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
ERCC4-201ENST00000311895 HAP1P54257 671 aaPredicted RBP10.99□□□□□ -0.65
ERCC4-201ENST00000311895 OS9Q13438 667 aaPredicted RBP10.98□□□□□ -0.65
ERCC4-201ENST00000311895 CDCA8Q53HL2 280 aa10.98□□□□□ -0.65
ERCC4-201ENST00000311895 ARID3AQ99856 593 aa10.98□□□□□ -0.65
ERCC4-201ENST00000311895 SOX12O15370 315 aa10.97□□□□□ -0.65
ERCC4-201ENST00000311895 FGD1P98174 961 aa10.97□□□□□ -0.65
ERCC4-201ENST00000311895 KCNJ4P48050 445 aa10.96□□□□□ -0.65
ERCC4-201ENST00000311895 POGKQ9P215 609 aa10.96□□□□□ -0.65
ERCC4-201ENST00000311895 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.96□□□□□ -0.66
ERCC4-201ENST00000311895 NUDCQ9Y266 331 aa10.96□□□□□ -0.66
ERCC4-201ENST00000311895 DCAF11Q8TEB1 546 aa10.95□□□□□ -0.66
ERCC4-201ENST00000311895 HSCBQ8IWL3 235 aa10.95□□□□□ -0.66
ERCC4-201ENST00000311895 GZF1Q9H116 711 aaPredicted RBP10.95□□□□□ -0.66
ERCC4-201ENST00000311895 APBB1O00213 710 aa10.94□□□□□ -0.66
ERCC4-201ENST00000311895 SAFB2Q14151 953 aaKnown RBP eCLIP10.93□□□□□ -0.66
ERCC4-201ENST00000311895 FOXD1Q16676 465 aa10.93□□□□□ -0.66
ERCC4-201ENST00000311895 MSNP26038 577 aaKnown RBP10.92□□□□□ -0.66
ERCC4-201ENST00000311895 DRC7Q8IY82 874 aa10.91□□□□□ -0.66
ERCC4-201ENST00000311895 GOLGA6L4A6NEF3 574 aa10.91□□□□□ -0.66
ERCC4-201ENST00000311895 SLKQ9H2G2 1235 aaPredicted RBP10.9□□□□□ -0.66
ERCC4-201ENST00000311895 HSPA5P11021 654 aaKnown RBP10.9□□□□□ -0.66
ERCC4-201ENST00000311895 TNIKQ9UKE5 1360 aa10.9□□□□□ -0.67
ERCC4-201ENST00000311895 WRNQ14191 1432 aaPredicted RBP eCLIP10.89□□□□□ -0.67
ERCC4-201ENST00000311895 NPHP1O15259 732 aa10.89□□□□□ -0.67
ERCC4-201ENST00000311895 GOLGA6L6A8MZA4 724 aa10.89□□□□□ -0.67
ERCC4-201ENST00000311895 TMF1P82094 1093 aa10.89□□□□□ -0.67
ERCC4-201ENST00000311895 L1TD1Q5T7N2 865 aaKnown RBP10.87□□□□□ -0.67
ERCC4-201ENST00000311895 CHAF1AQ13111 956 aaPredicted RBP10.87□□□□□ -0.67
ERCC4-201ENST00000311895 CCNB3Q8WWL7 1395 aa10.86□□□□□ -0.67
ERCC4-201ENST00000311895 SRPK2P78362 688 aaKnown RBP10.86□□□□□ -0.67
ERCC4-201ENST00000311895 EEA1Q15075 1411 aa10.86□□□□□ -0.67
ERCC4-201ENST00000311895 MORC1Q86VD1 984 aa10.86□□□□□ -0.67
ERCC4-201ENST00000311895 MS4A1P11836 297 aa10.86□□□□□ -0.67
ERCC4-201ENST00000311895 CEP164Q9UPV0 1460 aa10.86□□□□□ -0.67
ERCC4-201ENST00000311895 NCBP3Q53F19 620 aaKnown RBP10.85□□□□□ -0.67
ERCC4-201ENST00000311895 TSHZ2Q9NRE2 1034 aa10.85□□□□□ -0.67
ERCC4-201ENST00000311895 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
ERCC4-201ENST00000311895 KIF27Q86VH2 1401 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms