RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 ARID4BQ4LE39 1312 aaPredicted RBP17.04■□□□□ 0.32
SPTBN2-201ENST00000309996 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
SPTBN2-201ENST00000309996 GOLGA2Q08379 1002 aa17.02■□□□□ 0.32
SPTBN2-201ENST00000309996 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
SPTBN2-201ENST00000309996 KRI1Q8N9T8 703 aaKnown RBP17■□□□□ 0.31
SPTBN2-201ENST00000309996 BECN1Q14457 450 aa16.96■□□□□ 0.31
SPTBN2-201ENST00000309996 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
SPTBN2-201ENST00000309996 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
SPTBN2-201ENST00000309996 GOLGA6L22H0YM25 854 aa16.94■□□□□ 0.3
SPTBN2-201ENST00000309996 ISY1Q9ULR0 285 aaKnown RBP16.94■□□□□ 0.3
SPTBN2-201ENST00000309996 ANP32EQ9BTT0 268 aa16.91■□□□□ 0.3
SPTBN2-201ENST00000309996 PTMAP06454 111 aaKnown RBP16.91■□□□□ 0.3
SPTBN2-201ENST00000309996 DDRGK1Q96HY6 314 aa16.9■□□□□ 0.3
SPTBN2-201ENST00000309996 DNTTIP2Q5QJE6 756 aaKnown RBP16.9■□□□□ 0.3
SPTBN2-201ENST00000309996 CASC1Q6TDU7 716 aa16.89■□□□□ 0.29
SPTBN2-201ENST00000309996 NAP1L2Q9ULW6 460 aaPredicted RBP16.85■□□□□ 0.29
SPTBN2-201ENST00000309996 ABCC9O60706 1549 aa16.85■□□□□ 0.29
SPTBN2-201ENST00000309996 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
SPTBN2-201ENST00000309996 MRS2Q9HD23 443 aa16.83■□□□□ 0.29
SPTBN2-201ENST00000309996 PPM1GO15355 546 aaPredicted RBP16.82■□□□□ 0.28
SPTBN2-201ENST00000309996 FGD1P98174 961 aa16.82■□□□□ 0.28
SPTBN2-201ENST00000309996 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
SPTBN2-201ENST00000309996 GOLGA6L6A8MZA4 724 aa16.79■□□□□ 0.28
SPTBN2-201ENST00000309996 TMX4Q9H1E5 349 aaPredicted RBP16.78■□□□□ 0.28
SPTBN2-201ENST00000309996 OS9Q13438 667 aaPredicted RBP16.76■□□□□ 0.27
SPTBN2-201ENST00000309996 CHIC2Q9UKJ5 165 aa16.76■□□□□ 0.27
SPTBN2-201ENST00000309996 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
SPTBN2-201ENST00000309996 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
SPTBN2-201ENST00000309996 TRHP20396 242 aaPredicted RBP16.74■□□□□ 0.27
SPTBN2-201ENST00000309996 PLCB2Q00722 1185 aa16.72■□□□□ 0.27
SPTBN2-201ENST00000309996 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
SPTBN2-201ENST00000309996 KCNJ4P48050 445 aa16.71■□□□□ 0.27
SPTBN2-201ENST00000309996 FTSJ3Q8IY81 847 aaKnown RBP16.7■□□□□ 0.26
SPTBN2-201ENST00000309996 KIAA2012Q0VF49 1180 aa16.7■□□□□ 0.26
SPTBN2-201ENST00000309996 NAP1L5Q96NT1 182 aaPredicted RBP16.7■□□□□ 0.26
SPTBN2-201ENST00000309996 TSPY4P0CV99 314 aa16.69■□□□□ 0.26
SPTBN2-201ENST00000309996 TSPY10P0CW01 314 aa16.69■□□□□ 0.26
SPTBN2-201ENST00000309996 NOC3LQ8WTT2 800 aaKnown RBP16.68■□□□□ 0.26
SPTBN2-201ENST00000309996 NRDCO43847 1150 aa16.66■□□□□ 0.26
SPTBN2-201ENST00000309996 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
SPTBN2-201ENST00000309996 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
SPTBN2-201ENST00000309996 L1TD1Q5T7N2 865 aaKnown RBP16.64■□□□□ 0.25
SPTBN2-201ENST00000309996 G3V3G9 751 aa16.62■□□□□ 0.25
SPTBN2-201ENST00000309996 DCAF8Q5TAQ9 597 aa16.62■□□□□ 0.25
SPTBN2-201ENST00000309996 KCNH8Q96L42 1107 aa16.62■□□□□ 0.25
SPTBN2-201ENST00000309996 GNL2Q13823 731 aaKnown RBP16.62■□□□□ 0.25
SPTBN2-201ENST00000309996 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
SPTBN2-201ENST00000309996 PDE4CQ08493 712 aa16.59■□□□□ 0.25
SPTBN2-201ENST00000309996 CHMP7Q8WUX9 453 aaPredicted RBP16.59■□□□□ 0.25
SPTBN2-201ENST00000309996 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.59■□□□□ 0.25
SPTBN2-201ENST00000309996 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.25
SPTBN2-201ENST00000309996 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.25
SPTBN2-201ENST00000309996 HIRIP3Q9BW71 556 aaPredicted RBP16.58■□□□□ 0.24
SPTBN2-201ENST00000309996 CCDC9Q9Y3X0 531 aaKnown RBP16.56■□□□□ 0.24
SPTBN2-201ENST00000309996 GOLGA6L4A6NEF3 574 aa16.55■□□□□ 0.24
SPTBN2-201ENST00000309996 MTUS2Q5JR59 1369 aa16.55■□□□□ 0.24
SPTBN2-201ENST00000309996 KNSTRNQ9Y448 316 aa16.54■□□□□ 0.24
SPTBN2-201ENST00000309996 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
SPTBN2-201ENST00000309996 POGKQ9P215 609 aa16.54■□□□□ 0.24
SPTBN2-201ENST00000309996 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
SPTBN2-201ENST00000309996 MAPK8IP3Q9UPT6 1336 aa16.53■□□□□ 0.24
SPTBN2-201ENST00000309996 DRC7Q8IY82 874 aa16.52■□□□□ 0.23
SPTBN2-201ENST00000309996 FBXO3Q9UK99 471 aa16.52■□□□□ 0.23
SPTBN2-201ENST00000309996 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
SPTBN2-201ENST00000309996 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
SPTBN2-201ENST00000309996 CDCA8Q53HL2 280 aa16.51■□□□□ 0.23
SPTBN2-201ENST00000309996 A0A0U1RQG5 324 aaPredicted RBP16.5■□□□□ 0.23
SPTBN2-201ENST00000309996 CHMP4BQ9H444 224 aaKnown RBP16.49■□□□□ 0.23
SPTBN2-201ENST00000309996 ZNF330Q9Y3S2 320 aaPredicted RBP16.48■□□□□ 0.23
SPTBN2-201ENST00000309996 MIER1Q8N108 512 aa16.48■□□□□ 0.23
SPTBN2-201ENST00000309996 SOX12O15370 315 aa16.48■□□□□ 0.23
SPTBN2-201ENST00000309996 NEUROD2Q15784 382 aa16.47■□□□□ 0.23
SPTBN2-201ENST00000309996 MSNP26038 577 aaKnown RBP16.47■□□□□ 0.23
SPTBN2-201ENST00000309996 RGL3Q3MIN7 710 aa16.46■□□□□ 0.23
SPTBN2-201ENST00000309996 SENP3-EIF4A1A0A087X0R7 540 aa16.46■□□□□ 0.23
SPTBN2-201ENST00000309996 RGS3P49796 1198 aa16.45■□□□□ 0.22
SPTBN2-201ENST00000309996 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
SPTBN2-201ENST00000309996 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
SPTBN2-201ENST00000309996 FRAT1Q92837 279 aaPredicted RBP16.44■□□□□ 0.22
SPTBN2-201ENST00000309996 RRP7BPQ9NSQ0 103 aa16.44■□□□□ 0.22
SPTBN2-201ENST00000309996 VPS53Q5VIR6 699 aa16.44■□□□□ 0.22
SPTBN2-201ENST00000309996 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
SPTBN2-201ENST00000309996 HSCBQ8IWL3 235 aa16.41■□□□□ 0.22
SPTBN2-201ENST00000309996 MCCP23508 829 aa16.41■□□□□ 0.22
SPTBN2-201ENST00000309996 MS4A1P11836 297 aa16.41■□□□□ 0.22
SPTBN2-201ENST00000309996 CEP89Q96ST8 783 aa16.41■□□□□ 0.22
SPTBN2-201ENST00000309996 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
SPTBN2-201ENST00000309996 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
SPTBN2-201ENST00000309996 NOP58Q9Y2X3 529 aaKnown RBP16.39■□□□□ 0.21
SPTBN2-201ENST00000309996 MLECQ14165 292 aa16.38■□□□□ 0.21
SPTBN2-201ENST00000309996 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
SPTBN2-201ENST00000309996 CSB-PGBD3P0DP91 1061 aa16.37■□□□□ 0.21
SPTBN2-201ENST00000309996 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
SPTBN2-201ENST00000309996 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
SPTBN2-201ENST00000309996 WWC1Q8IX03 1113 aa16.36■□□□□ 0.21
SPTBN2-201ENST00000309996 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
SPTBN2-201ENST00000309996 RTF1Q92541 710 aaKnown RBP16.34■□□□□ 0.21
SPTBN2-201ENST00000309996 CARD11Q9BXL7 1154 aa16.34■□□□□ 0.21
SPTBN2-201ENST00000309996 TAF7LQ5H9L4 462 aa16.34■□□□□ 0.21
SPTBN2-201ENST00000309996 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms