RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 MRS2Q9HD23 443 aa27.61■■■□□ 2.01
SH3RF3-201ENST00000309415 RSF1Q96T23 1441 aaPredicted RBP27.6■■■□□ 2.01
SH3RF3-201ENST00000309415 ACIN1Q9UKV3 1341 aaKnown RBP27.59■■■□□ 2.01
SH3RF3-201ENST00000309415 CCDC136Q96JN2 1154 aa27.56■■■□□ 2
SH3RF3-201ENST00000309415 CLIP1P30622 1438 aa27.54■■■□□ 2
SH3RF3-201ENST00000309415 ERCC6Q03468 1493 aa27.54■■■□□ 2
SH3RF3-201ENST00000309415 RGL3Q3MIN7 710 aa27.52■■■□□ 2
SH3RF3-201ENST00000309415 ARXQ96QS3 562 aa27.5■■□□□ 1.99
SH3RF3-201ENST00000309415 EIF4G2P78344 907 aaKnown RBP eCLIP27.5■■□□□ 1.99
SH3RF3-201ENST00000309415 CFDP1Q9UEE9 299 aaPredicted RBP27.47■■□□□ 1.99
SH3RF3-201ENST00000309415 CDK11BP21127 795 aaKnown RBP27.46■■□□□ 1.99
SH3RF3-201ENST00000309415 CFAP53Q96M91 514 aa27.45■■□□□ 1.99
SH3RF3-201ENST00000309415 CCDC180Q9P1Z9 1646 aa27.42■■□□□ 1.98
SH3RF3-201ENST00000309415 LMOD2Q6P5Q4 547 aa27.41■■□□□ 1.98
SH3RF3-201ENST00000309415 CDCA8Q53HL2 280 aa27.4■■□□□ 1.98
SH3RF3-201ENST00000309415 PPM1GO15355 546 aaPredicted RBP27.4■■□□□ 1.98
SH3RF3-201ENST00000309415 TRHP20396 242 aaPredicted RBP27.4■■□□□ 1.98
SH3RF3-201ENST00000309415 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
SH3RF3-201ENST00000309415 HIRIP3Q9BW71 556 aaPredicted RBP27.38■■□□□ 1.97
SH3RF3-201ENST00000309415 POGKQ9P215 609 aa27.34■■□□□ 1.97
SH3RF3-201ENST00000309415 KNSTRNQ9Y448 316 aa27.32■■□□□ 1.96
SH3RF3-201ENST00000309415 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
SH3RF3-201ENST00000309415 GOLGA3Q08378 1498 aa27.29■■□□□ 1.96
SH3RF3-201ENST00000309415 NPHP1O15259 732 aa27.29■■□□□ 1.96
SH3RF3-201ENST00000309415 KIF27Q86VH2 1401 aa27.26■■□□□ 1.95
SH3RF3-201ENST00000309415 EEA1Q15075 1411 aa27.25■■□□□ 1.95
SH3RF3-201ENST00000309415 CARD11Q9BXL7 1154 aa27.22■■□□□ 1.95
SH3RF3-201ENST00000309415 WRNQ14191 1432 aaPredicted RBP eCLIP27.22■■□□□ 1.95
SH3RF3-201ENST00000309415 MAPK8IP3Q9UPT6 1336 aa27.21■■□□□ 1.95
SH3RF3-201ENST00000309415 LAS1LQ9Y4W2 734 aaKnown RBP27.18■■□□□ 1.94
SH3RF3-201ENST00000309415 NUDCQ9Y266 331 aa27.18■■□□□ 1.94
SH3RF3-201ENST00000309415 NCLP19338 710 aaKnown RBP27.17■■□□□ 1.94
SH3RF3-201ENST00000309415 IRX6P78412 446 aaPredicted RBP27.16■■□□□ 1.94
SH3RF3-201ENST00000309415 MLECQ14165 292 aa27.15■■□□□ 1.94
SH3RF3-201ENST00000309415 HDGFP51858 240 aaKnown RBP27.14■■□□□ 1.94
SH3RF3-201ENST00000309415 CASC1Q6TDU7 716 aa27.12■■□□□ 1.93
SH3RF3-201ENST00000309415 FTSJ3Q8IY81 847 aaKnown RBP27.12■■□□□ 1.93
SH3RF3-201ENST00000309415 NACADO15069 1562 aa27.12■■□□□ 1.93
SH3RF3-201ENST00000309415 CEP162Q5TB80 1403 aa27.1■■□□□ 1.93
SH3RF3-201ENST00000309415 KANK1Q14678 1352 aa27.1■■□□□ 1.93
SH3RF3-201ENST00000309415 EIF5BO60841 1220 aaKnown RBP27.1■■□□□ 1.93
SH3RF3-201ENST00000309415 NEUROD2Q15784 382 aa27.09■■□□□ 1.93
SH3RF3-201ENST00000309415 BECN1Q14457 450 aa27.08■■□□□ 1.93
SH3RF3-201ENST00000309415 CCNB3Q8WWL7 1395 aa27.07■■□□□ 1.92
SH3RF3-201ENST00000309415 NBR1Q14596 966 aa27.06■■□□□ 1.92
SH3RF3-201ENST00000309415 TNNT2P45379 298 aaPredicted RBP27.03■■□□□ 1.92
SH3RF3-201ENST00000309415 EIF4G1Q04637 1599 aaKnown RBP27.03■■□□□ 1.92
SH3RF3-201ENST00000309415 ZRSR1Q15695 479 aaKnown RBP27.01■■□□□ 1.92
SH3RF3-201ENST00000309415 TULP1O00294 542 aaPredicted RBP27.01■■□□□ 1.91
SH3RF3-201ENST00000309415 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
SH3RF3-201ENST00000309415 GOLGA6L22H0YM25 854 aa26.99■■□□□ 1.91
SH3RF3-201ENST00000309415 SENP3-EIF4A1A0A087X0R7 540 aa26.97■■□□□ 1.91
SH3RF3-201ENST00000309415 DDRGK1Q96HY6 314 aa26.97■■□□□ 1.91
SH3RF3-201ENST00000309415 U2SURPO15042 1029 aaKnown RBP26.97■■□□□ 1.91
SH3RF3-201ENST00000309415 MIER1Q8N108 512 aa26.97■■□□□ 1.91
SH3RF3-201ENST00000309415 PNNQ9H307 717 aaKnown RBP26.97■■□□□ 1.91
SH3RF3-201ENST00000309415 OS9Q13438 667 aaPredicted RBP26.96■■□□□ 1.91
SH3RF3-201ENST00000309415 GOLGA2Q08379 1002 aa26.95■■□□□ 1.9
SH3RF3-201ENST00000309415 SOX12O15370 315 aa26.9■■□□□ 1.9
SH3RF3-201ENST00000309415 SRPK2P78362 688 aaKnown RBP26.9■■□□□ 1.9
SH3RF3-201ENST00000309415 CHMP4BQ9H444 224 aaKnown RBP26.9■■□□□ 1.9
SH3RF3-201ENST00000309415 CC2D1BQ5T0F9 858 aaKnown RBP26.89■■□□□ 1.9
SH3RF3-201ENST00000309415 TMF1P82094 1093 aa26.86■■□□□ 1.89
SH3RF3-201ENST00000309415 FRAT1Q92837 279 aaPredicted RBP26.86■■□□□ 1.89
SH3RF3-201ENST00000309415 GGT6Q6P531 493 aa26.85■■□□□ 1.89
SH3RF3-201ENST00000309415 TNIKQ9UKE5 1360 aa26.85■■□□□ 1.89
SH3RF3-201ENST00000309415 DCAF11Q8TEB1 546 aa26.84■■□□□ 1.89
SH3RF3-201ENST00000309415 TAOK2Q9UL54 1235 aa26.84■■□□□ 1.89
SH3RF3-201ENST00000309415 FHAD1B1AJZ9 1412 aa26.83■■□□□ 1.89
SH3RF3-201ENST00000309415 TPRNQ4KMQ1 711 aa26.83■■□□□ 1.89
SH3RF3-201ENST00000309415 ANP32EQ9BTT0 268 aa26.82■■□□□ 1.88
SH3RF3-201ENST00000309415 MS4A1P11836 297 aa26.81■■□□□ 1.88
SH3RF3-201ENST00000309415 SAFB2Q14151 953 aaKnown RBP eCLIP26.81■■□□□ 1.88
SH3RF3-201ENST00000309415 FGD1P98174 961 aa26.81■■□□□ 1.88
SH3RF3-201ENST00000309415 CARMIL1Q5VZK9 1371 aa26.8■■□□□ 1.88
SH3RF3-201ENST00000309415 CUX2O14529 1486 aa26.79■■□□□ 1.88
SH3RF3-201ENST00000309415 KCNJ4P48050 445 aa26.76■■□□□ 1.87
SH3RF3-201ENST00000309415 TRIM44Q96DX7 344 aaPredicted RBP26.76■■□□□ 1.87
SH3RF3-201ENST00000309415 SIN3AQ96ST3 1273 aa26.76■■□□□ 1.87
SH3RF3-201ENST00000309415 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
SH3RF3-201ENST00000309415 STK26Q9P289 416 aa26.74■■□□□ 1.87
SH3RF3-201ENST00000309415 CARMIL2Q6F5E8 1435 aa26.74■■□□□ 1.87
SH3RF3-201ENST00000309415 NAP1L2Q9ULW6 460 aaPredicted RBP26.73■■□□□ 1.87
SH3RF3-201ENST00000309415 MORC1Q86VD1 984 aa26.73■■□□□ 1.87
SH3RF3-201ENST00000309415 RTF1Q92541 710 aaKnown RBP26.72■■□□□ 1.87
SH3RF3-201ENST00000309415 PAK3O75914 559 aaPredicted RBP26.71■■□□□ 1.87
SH3RF3-201ENST00000309415 PTMAP06454 111 aaKnown RBP26.71■■□□□ 1.87
SH3RF3-201ENST00000309415 HDGFL2Q7Z4V5 671 aaPredicted RBP26.7■■□□□ 1.86
SH3RF3-201ENST00000309415 GLIPR1L2Q4G1C9 344 aa26.7■■□□□ 1.86
SH3RF3-201ENST00000309415 CSB-PGBD3P0DP91 1061 aa26.69■■□□□ 1.86
SH3RF3-201ENST00000309415 RGS3P49796 1198 aa26.65■■□□□ 1.86
SH3RF3-201ENST00000309415 SUPT16HQ9Y5B9 1047 aaKnown RBP26.64■■□□□ 1.86
SH3RF3-201ENST00000309415 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
SH3RF3-201ENST00000309415 ISY1Q9ULR0 285 aaKnown RBP26.62■■□□□ 1.85
SH3RF3-201ENST00000309415 CCDC9Q9Y3X0 531 aaKnown RBP26.6■■□□□ 1.85
SH3RF3-201ENST00000309415 EFCAB2Q5VUJ9 269 aa26.59■■□□□ 1.85
SH3RF3-201ENST00000309415 HSP90AB1P08238 724 aaKnown RBP26.56■■□□□ 1.84
SH3RF3-201ENST00000309415 ZNF330Q9Y3S2 320 aaPredicted RBP26.55■■□□□ 1.84
SH3RF3-201ENST00000309415 TMX4Q9H1E5 349 aaPredicted RBP26.55■■□□□ 1.84
SH3RF3-201ENST00000309415 PKD2Q13563 968 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms