RNA–Protein interactions for RNA: ENST00000306773.4

NPTX1-201, Transcript of neuronal pentraxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPTX1, Length 5,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1-201ENST00000306773 TMC1Q8TDI8 760 aa25.67■■□□□ 1.7
NPTX1-201ENST00000306773 FAM9BQ8IZU0 186 aa25.66■■□□□ 1.7
NPTX1-201ENST00000306773 EIF4G2P78344 907 aaKnown RBP eCLIP25.65■■□□□ 1.7
NPTX1-201ENST00000306773 PLPPR3Q6T4P5 718 aa25.65■■□□□ 1.7
NPTX1-201ENST00000306773 SMARCA2P51531 1590 aa25.64■■□□□ 1.69
NPTX1-201ENST00000306773 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
NPTX1-201ENST00000306773 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
NPTX1-201ENST00000306773 CARMIL1Q5VZK9 1371 aa25.6■■□□□ 1.69
NPTX1-201ENST00000306773 NPM2Q86SE8 214 aaKnown RBP25.59■■□□□ 1.69
NPTX1-201ENST00000306773 CUX2O14529 1486 aa25.58■■□□□ 1.69
NPTX1-201ENST00000306773 WDR43Q15061 677 aaKnown RBP eCLIP25.56■■□□□ 1.68
NPTX1-201ENST00000306773 BCL11AQ9H165 835 aa25.56■■□□□ 1.68
NPTX1-201ENST00000306773 CCDC88BA6NC98 1476 aa25.55■■□□□ 1.68
NPTX1-201ENST00000306773 MRS2Q9HD23 443 aa25.54■■□□□ 1.68
NPTX1-201ENST00000306773 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.5■■□□□ 1.67
NPTX1-201ENST00000306773 SOGA1O94964 1423 aa25.47■■□□□ 1.67
NPTX1-201ENST00000306773 PDS5BQ9NTI5 1447 aa25.47■■□□□ 1.67
NPTX1-201ENST00000306773 PPP1R15AO75807 674 aaPredicted RBP25.45■■□□□ 1.66
NPTX1-201ENST00000306773 SALL2Q9Y467 1007 aaPredicted RBP25.43■■□□□ 1.66
NPTX1-201ENST00000306773 CCNB3Q8WWL7 1395 aa25.43■■□□□ 1.66
NPTX1-201ENST00000306773 HIRIP3Q9BW71 556 aaPredicted RBP25.42■■□□□ 1.66
NPTX1-201ENST00000306773 CDCA8Q53HL2 280 aa25.41■■□□□ 1.66
NPTX1-201ENST00000306773 RGL3Q3MIN7 710 aa25.39■■□□□ 1.65
NPTX1-201ENST00000306773 EIF4G1Q04637 1599 aaKnown RBP25.38■■□□□ 1.65
NPTX1-201ENST00000306773 CCDC136Q96JN2 1154 aa25.37■■□□□ 1.65
NPTX1-201ENST00000306773 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
NPTX1-201ENST00000306773 UPF2Q9HAU5 1272 aaKnown RBP25.35■■□□□ 1.65
NPTX1-201ENST00000306773 VPS8Q8N3P4 1428 aa25.3■■□□□ 1.64
NPTX1-201ENST00000306773 IRX6P78412 446 aaPredicted RBP25.29■■□□□ 1.64
NPTX1-201ENST00000306773 CARD11Q9BXL7 1154 aa25.28■■□□□ 1.64
NPTX1-201ENST00000306773 ABCC8Q09428 1581 aa25.28■■□□□ 1.64
NPTX1-201ENST00000306773 ARID4BQ4LE39 1312 aaPredicted RBP25.27■■□□□ 1.64
NPTX1-201ENST00000306773 CARMIL2Q6F5E8 1435 aa25.26■■□□□ 1.63
NPTX1-201ENST00000306773 CADPSQ9ULU8 1353 aa25.22■■□□□ 1.63
NPTX1-201ENST00000306773 TIMELESSQ9UNS1 1208 aa25.22■■□□□ 1.63
NPTX1-201ENST00000306773 CFAP53Q96M91 514 aa25.21■■□□□ 1.63
NPTX1-201ENST00000306773 KNSTRNQ9Y448 316 aa25.21■■□□□ 1.63
NPTX1-201ENST00000306773 HSP90AA1P07900 732 aaKnown RBP25.19■■□□□ 1.62
NPTX1-201ENST00000306773 NBR1Q14596 966 aa25.19■■□□□ 1.62
NPTX1-201ENST00000306773 WIZO95785 1651 aa25.19■■□□□ 1.62
NPTX1-201ENST00000306773 FMN1Q68DA7 1419 aa25.18■■□□□ 1.62
NPTX1-201ENST00000306773 ARHGAP35Q9NRY4 1499 aa25.17■■□□□ 1.62
NPTX1-201ENST00000306773 KANK1Q14678 1352 aa25.16■■□□□ 1.62
NPTX1-201ENST00000306773 TDRD9Q8NDG6 1382 aaKnown RBP25.16■■□□□ 1.62
NPTX1-201ENST00000306773 SIN3AQ96ST3 1273 aa25.15■■□□□ 1.62
NPTX1-201ENST00000306773 C14orf37Q86TY3 774 aa25.14■■□□□ 1.62
NPTX1-201ENST00000306773 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.61
NPTX1-201ENST00000306773 MYH16Q9H6N6 1097 aa25.1■■□□□ 1.61
NPTX1-201ENST00000306773 EIF5BO60841 1220 aaKnown RBP25.1■■□□□ 1.61
NPTX1-201ENST00000306773 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
NPTX1-201ENST00000306773 SETD5Q9C0A6 1442 aa25.09■■□□□ 1.61
NPTX1-201ENST00000306773 SMARCA4P51532 1647 aa25.06■■□□□ 1.6
NPTX1-201ENST00000306773 POGKQ9P215 609 aa25.05■■□□□ 1.6
NPTX1-201ENST00000306773 RAPGEF2Q9Y4G8 1499 aa25.03■■□□□ 1.6
NPTX1-201ENST00000306773 ANP32BQ92688 251 aaKnown RBP25■■□□□ 1.59
NPTX1-201ENST00000306773 KANK4Q5T7N3 995 aaPredicted RBP25■■□□□ 1.59
NPTX1-201ENST00000306773 ZBTB7CA1YPR0 619 aa25■■□□□ 1.59
NPTX1-201ENST00000306773 HDGFP51858 240 aaKnown RBP24.99■■□□□ 1.59
NPTX1-201ENST00000306773 DCAF11Q8TEB1 546 aa24.99■■□□□ 1.59
NPTX1-201ENST00000306773 NUDCQ9Y266 331 aa24.99■■□□□ 1.59
NPTX1-201ENST00000306773 SUPT16HQ9Y5B9 1047 aaKnown RBP24.97■■□□□ 1.59
NPTX1-201ENST00000306773 TMF1P82094 1093 aa24.97■■□□□ 1.59
NPTX1-201ENST00000306773 EFCAB2Q5VUJ9 269 aa24.96■■□□□ 1.59
NPTX1-201ENST00000306773 MAPK8IP3Q9UPT6 1336 aa24.91■■□□□ 1.58
NPTX1-201ENST00000306773 PPM1GO15355 546 aaPredicted RBP24.9■■□□□ 1.58
NPTX1-201ENST00000306773 ANKRD30AQ9BXX3 1397 aa24.89■■□□□ 1.58
NPTX1-201ENST00000306773 PKD2Q13563 968 aa24.89■■□□□ 1.58
NPTX1-201ENST00000306773 HAP1P54257 671 aaPredicted RBP24.88■■□□□ 1.57
NPTX1-201ENST00000306773 SENP3-EIF4A1A0A087X0R7 540 aa24.88■■□□□ 1.57
NPTX1-201ENST00000306773 ANP32EQ9BTT0 268 aa24.88■■□□□ 1.57
NPTX1-201ENST00000306773 PLEKHG5O94827 1062 aa24.86■■□□□ 1.57
NPTX1-201ENST00000306773 A0A0G2JS52 829 aa24.85■■□□□ 1.57
NPTX1-201ENST00000306773 RSPH4AQ5TD94 716 aa24.84■■□□□ 1.57
NPTX1-201ENST00000306773 FANCD2Q9BXW9 1451 aa24.84■■□□□ 1.57
NPTX1-201ENST00000306773 PNNQ9H307 717 aaKnown RBP24.83■■□□□ 1.57
NPTX1-201ENST00000306773 ARXQ96QS3 562 aa24.82■■□□□ 1.56
NPTX1-201ENST00000306773 GGT6Q6P531 493 aa24.82■■□□□ 1.56
NPTX1-201ENST00000306773 FHOD3Q2V2M9 1422 aa24.81■■□□□ 1.56
NPTX1-201ENST00000306773 RAB3GAP2Q9H2M9 1393 aa24.81■■□□□ 1.56
NPTX1-201ENST00000306773 CCDC18Q5T9S5 1454 aa24.81■■□□□ 1.56
NPTX1-201ENST00000306773 TRHP20396 242 aaPredicted RBP24.8■■□□□ 1.56
NPTX1-201ENST00000306773 MPHOSPH9Q99550 1183 aa24.79■■□□□ 1.56
NPTX1-201ENST00000306773 NUP155O75694 1391 aa24.79■■□□□ 1.56
NPTX1-201ENST00000306773 CC2D1BQ5T0F9 858 aaKnown RBP24.78■■□□□ 1.56
NPTX1-201ENST00000306773 JPH4Q96JJ6 628 aa24.78■■□□□ 1.56
NPTX1-201ENST00000306773 MLECQ14165 292 aa24.78■■□□□ 1.56
NPTX1-201ENST00000306773 FTSJ3Q8IY81 847 aaKnown RBP24.77■■□□□ 1.56
NPTX1-201ENST00000306773 NEUROD2Q15784 382 aa24.76■■□□□ 1.55
NPTX1-201ENST00000306773 CCER2I3L3R5 266 aa24.75■■□□□ 1.55
NPTX1-201ENST00000306773 PPP4R2Q9NY27 417 aa24.74■■□□□ 1.55
NPTX1-201ENST00000306773 HSPA5P11021 654 aaKnown RBP24.74■■□□□ 1.55
NPTX1-201ENST00000306773 CHMP4BQ9H444 224 aaKnown RBP24.74■■□□□ 1.55
NPTX1-201ENST00000306773 DDRGK1Q96HY6 314 aa24.73■■□□□ 1.55
NPTX1-201ENST00000306773 MS4A1P11836 297 aa24.72■■□□□ 1.55
NPTX1-201ENST00000306773 BECN1Q14457 450 aa24.72■■□□□ 1.55
NPTX1-201ENST00000306773 SRPK2P78362 688 aaKnown RBP24.72■■□□□ 1.55
NPTX1-201ENST00000306773 TNNT2P45379 298 aaPredicted RBP24.71■■□□□ 1.55
NPTX1-201ENST00000306773 LMOD2Q6P5Q4 547 aa24.71■■□□□ 1.55
NPTX1-201ENST00000306773 U2SURPO15042 1029 aaKnown RBP24.69■■□□□ 1.54
NPTX1-201ENST00000306773 LAS1LQ9Y4W2 734 aaKnown RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms