RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
PRPF8-201ENST00000304992 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
PRPF8-201ENST00000304992 MRS2Q9HD23 443 aa13.6□□□□□ -0.23
PRPF8-201ENST00000304992 SENP3-EIF4A1A0A087X0R7 540 aa13.6□□□□□ -0.23
PRPF8-201ENST00000304992 LMOD2Q6P5Q4 547 aa13.59□□□□□ -0.23
PRPF8-201ENST00000304992 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.23
PRPF8-201ENST00000304992 CLIP1P30622 1438 aa13.57□□□□□ -0.24
PRPF8-201ENST00000304992 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.56□□□□□ -0.24
PRPF8-201ENST00000304992 ACIN1Q9UKV3 1341 aaKnown RBP13.56□□□□□ -0.24
PRPF8-201ENST00000304992 CFDP1Q9UEE9 299 aaPredicted RBP13.55□□□□□ -0.24
PRPF8-201ENST00000304992 CCDC136Q96JN2 1154 aa13.54□□□□□ -0.24
PRPF8-201ENST00000304992 IRX6P78412 446 aaPredicted RBP13.53□□□□□ -0.24
PRPF8-201ENST00000304992 MLECQ14165 292 aa13.52□□□□□ -0.24
PRPF8-201ENST00000304992 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
PRPF8-201ENST00000304992 ANP32BQ92688 251 aaKnown RBP13.51□□□□□ -0.25
PRPF8-201ENST00000304992 EIF4G2P78344 907 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRPF8-201ENST00000304992 MYH16Q9H6N6 1097 aa13.5□□□□□ -0.25
PRPF8-201ENST00000304992 CCDC180Q9P1Z9 1646 aa13.49□□□□□ -0.25
PRPF8-201ENST00000304992 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
PRPF8-201ENST00000304992 POGKQ9P215 609 aa13.46□□□□□ -0.26
PRPF8-201ENST00000304992 LAS1LQ9Y4W2 734 aaKnown RBP13.44□□□□□ -0.26
PRPF8-201ENST00000304992 TNNT2P45379 298 aaPredicted RBP13.44□□□□□ -0.26
PRPF8-201ENST00000304992 NEUROD2Q15784 382 aa13.44□□□□□ -0.26
PRPF8-201ENST00000304992 WRNQ14191 1432 aaPredicted RBP eCLIP13.42□□□□□ -0.269e-6■■■■■ 50.1
PRPF8-201ENST00000304992 NPHP1O15259 732 aa13.42□□□□□ -0.26
PRPF8-201ENST00000304992 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
PRPF8-201ENST00000304992 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
PRPF8-201ENST00000304992 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
PRPF8-201ENST00000304992 SOX12O15370 315 aa13.41□□□□□ -0.26
PRPF8-201ENST00000304992 GOLGA3Q08378 1498 aa13.4□□□□□ -0.26
PRPF8-201ENST00000304992 KIF27Q86VH2 1401 aa13.4□□□□□ -0.26
PRPF8-201ENST00000304992 EIF4G1Q04637 1599 aaKnown RBP13.39□□□□□ -0.27
PRPF8-201ENST00000304992 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
PRPF8-201ENST00000304992 NBR1Q14596 966 aa13.38□□□□□ -0.27
PRPF8-201ENST00000304992 DCAF1Q9Y4B6 1507 aa13.38□□□□□ -0.27
PRPF8-201ENST00000304992 MIER1Q8N108 512 aa13.38□□□□□ -0.27
PRPF8-201ENST00000304992 TULP1O00294 542 aaPredicted RBP13.36□□□□□ -0.27
PRPF8-201ENST00000304992 SAFB2Q14151 953 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRPF8-201ENST00000304992 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
PRPF8-201ENST00000304992 CDCA8Q53HL2 280 aa13.34□□□□□ -0.27
PRPF8-201ENST00000304992 TPRNQ4KMQ1 711 aa13.33□□□□□ -0.28
PRPF8-201ENST00000304992 MAPK8IP3Q9UPT6 1336 aa13.33□□□□□ -0.28
PRPF8-201ENST00000304992 NACADO15069 1562 aa13.32□□□□□ -0.28
PRPF8-201ENST00000304992 U2SURPO15042 1029 aaKnown RBP13.32□□□□□ -0.28
PRPF8-201ENST00000304992 CC2D1BQ5T0F9 858 aaKnown RBP13.32□□□□□ -0.28
PRPF8-201ENST00000304992 GGT6Q6P531 493 aa13.32□□□□□ -0.28
PRPF8-201ENST00000304992 CDK11BP21127 795 aaKnown RBP13.32□□□□□ -0.28
PRPF8-201ENST00000304992 EIF5BO60841 1220 aaKnown RBP13.31□□□□□ -0.28
PRPF8-201ENST00000304992 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
PRPF8-201ENST00000304992 FTSJ3Q8IY81 847 aaKnown RBP13.31□□□□□ -0.28
PRPF8-201ENST00000304992 CCNB3Q8WWL7 1395 aa13.3□□□□□ -0.28
PRPF8-201ENST00000304992 EEA1Q15075 1411 aa13.28□□□□□ -0.28
PRPF8-201ENST00000304992 STK26Q9P289 416 aa13.28□□□□□ -0.28
PRPF8-201ENST00000304992 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
PRPF8-201ENST00000304992 DCAF11Q8TEB1 546 aa13.28□□□□□ -0.28
PRPF8-201ENST00000304992 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.28
PRPF8-201ENST00000304992 FRAT1Q92837 279 aaPredicted RBP13.26□□□□□ -0.29
PRPF8-201ENST00000304992 CUX2O14529 1486 aa13.25□□□□□ -0.29
PRPF8-201ENST00000304992 KANK1Q14678 1352 aa13.25□□□□□ -0.29
PRPF8-201ENST00000304992 CEP164Q9UPV0 1460 aa13.25□□□□□ -0.29
PRPF8-201ENST00000304992 MYO15BQ96JP2 1530 aa13.24□□□□□ -0.29
PRPF8-201ENST00000304992 OS9Q13438 667 aaPredicted RBP13.23□□□□□ -0.29
PRPF8-201ENST00000304992 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
PRPF8-201ENST00000304992 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
PRPF8-201ENST00000304992 HDGFP51858 240 aaKnown RBP13.22□□□□□ -0.29
PRPF8-201ENST00000304992 NCLP19338 710 aaKnown RBP13.21□□□□□ -0.3
PRPF8-201ENST00000304992 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
PRPF8-201ENST00000304992 CASC1Q6TDU7 716 aa13.19□□□□□ -0.3
PRPF8-201ENST00000304992 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
PRPF8-201ENST00000304992 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
PRPF8-201ENST00000304992 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
PRPF8-201ENST00000304992 FOXD1Q16676 465 aa13.18□□□□□ -0.3
PRPF8-201ENST00000304992 BECN1Q14457 450 aa13.17□□□□□ -0.3
PRPF8-201ENST00000304992 TMF1P82094 1093 aa13.17□□□□□ -0.3
PRPF8-201ENST00000304992 NAP1L2Q9ULW6 460 aaPredicted RBP13.17□□□□□ -0.3
PRPF8-201ENST00000304992 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
PRPF8-201ENST00000304992 RGS3P49796 1198 aa13.17□□□□□ -0.3
PRPF8-201ENST00000304992 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
PRPF8-201ENST00000304992 ZRSR1Q15695 479 aaKnown RBP13.15□□□□□ -0.3
PRPF8-201ENST00000304992 CSB-PGBD3P0DP91 1061 aa13.15□□□□□ -0.3
PRPF8-201ENST00000304992 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.3
PRPF8-201ENST00000304992 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
PRPF8-201ENST00000304992 FGD1P98174 961 aa13.14□□□□□ -0.31
PRPF8-201ENST00000304992 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
PRPF8-201ENST00000304992 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
PRPF8-201ENST00000304992 NUTM2DQ5VT03 806 aaPredicted RBP13.13□□□□□ -0.31
PRPF8-201ENST00000304992 KCNJ4P48050 445 aa13.13□□□□□ -0.31
PRPF8-201ENST00000304992 SOGA1O94964 1423 aa13.12□□□□□ -0.31
PRPF8-201ENST00000304992 PKD2Q13563 968 aa13.12□□□□□ -0.31
PRPF8-201ENST00000304992 GOLGA6L22H0YM25 854 aa13.11□□□□□ -0.31
PRPF8-201ENST00000304992 ISY1Q9ULR0 285 aaKnown RBP13.11□□□□□ -0.31
PRPF8-201ENST00000304992 RTF1Q92541 710 aaKnown RBP13.11□□□□□ -0.31
PRPF8-201ENST00000304992 PNNQ9H307 717 aaKnown RBP13.1□□□□□ -0.31
PRPF8-201ENST00000304992 CARMIL2Q6F5E8 1435 aa13.1□□□□□ -0.31
PRPF8-201ENST00000304992 DDRGK1Q96HY6 314 aa13.09□□□□□ -0.31
PRPF8-201ENST00000304992 HDGFL2Q7Z4V5 671 aaPredicted RBP13.08□□□□□ -0.32
PRPF8-201ENST00000304992 PDS5BQ9NTI5 1447 aa13.08□□□□□ -0.32
PRPF8-201ENST00000304992 NUTM2FA1L443 756 aa13.08□□□□□ -0.32
PRPF8-201ENST00000304992 KIF3BO15066 747 aa13.07□□□□□ -0.32
PRPF8-201ENST00000304992 APBB1O00213 710 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms