RNA–Protein interactions for RNA: ENST00000304613.7

KNDC1-201, Transcript of kinase non-catalytic C-lobe domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNDC1, Length 6,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNDC1-201ENST00000304613 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
KNDC1-201ENST00000304613 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
KNDC1-201ENST00000304613 TPRNQ4KMQ1 711 aa18.98■□□□□ 0.63
KNDC1-201ENST00000304613 PPP1R15AO75807 674 aaPredicted RBP18.98■□□□□ 0.63
KNDC1-201ENST00000304613 TULP1O00294 542 aaPredicted RBP18.97■□□□□ 0.63
KNDC1-201ENST00000304613 NCLP19338 710 aaKnown RBP18.93■□□□□ 0.62
KNDC1-201ENST00000304613 RRP7BPQ9NSQ0 103 aa18.93■□□□□ 0.62
KNDC1-201ENST00000304613 HAP1P54257 671 aaPredicted RBP18.92■□□□□ 0.62
KNDC1-201ENST00000304613 KCNH8Q96L42 1107 aa18.92■□□□□ 0.62
KNDC1-201ENST00000304613 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
KNDC1-201ENST00000304613 PPM1GO15355 546 aaPredicted RBP18.91■□□□□ 0.62
KNDC1-201ENST00000304613 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
KNDC1-201ENST00000304613 MIER1Q8N108 512 aa18.9■□□□□ 0.62
KNDC1-201ENST00000304613 TRIM44Q96DX7 344 aaPredicted RBP18.88■□□□□ 0.61
KNDC1-201ENST00000304613 EIF4G2P78344 907 aaKnown RBP eCLIP18.87■□□□□ 0.61
KNDC1-201ENST00000304613 BECN1Q14457 450 aa18.87■□□□□ 0.61
KNDC1-201ENST00000304613 TAOK2Q9UL54 1235 aa18.87■□□□□ 0.61
KNDC1-201ENST00000304613 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.6
KNDC1-201ENST00000304613 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
KNDC1-201ENST00000304613 GOLGA6L22H0YM25 854 aa18.81■□□□□ 0.6
KNDC1-201ENST00000304613 ZRSR1Q15695 479 aaKnown RBP18.81■□□□□ 0.6
KNDC1-201ENST00000304613 NEUROD2Q15784 382 aa18.8■□□□□ 0.6
KNDC1-201ENST00000304613 DDRGK1Q96HY6 314 aa18.8■□□□□ 0.6
KNDC1-201ENST00000304613 PTMAP06454 111 aaKnown RBP18.8■□□□□ 0.6
KNDC1-201ENST00000304613 LMOD2Q6P5Q4 547 aa18.78■□□□□ 0.6
KNDC1-201ENST00000304613 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
KNDC1-201ENST00000304613 FTSJ3Q8IY81 847 aaKnown RBP18.76■□□□□ 0.59
KNDC1-201ENST00000304613 DNTTIP2Q5QJE6 756 aaKnown RBP18.75■□□□□ 0.59
KNDC1-201ENST00000304613 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
KNDC1-201ENST00000304613 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
KNDC1-201ENST00000304613 NPHP1O15259 732 aa18.72■□□□□ 0.59
KNDC1-201ENST00000304613 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
KNDC1-201ENST00000304613 PLCB2Q00722 1185 aa18.7■□□□□ 0.58
KNDC1-201ENST00000304613 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
KNDC1-201ENST00000304613 PLEKHD1A6NEE1 506 aa18.68■□□□□ 0.58
KNDC1-201ENST00000304613 SUPT16HQ9Y5B9 1047 aaKnown RBP18.68■□□□□ 0.58
KNDC1-201ENST00000304613 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
KNDC1-201ENST00000304613 ERCC6Q03468 1493 aa18.67■□□□□ 0.58
KNDC1-201ENST00000304613 FRAT1Q92837 279 aaPredicted RBP18.66■□□□□ 0.58
KNDC1-201ENST00000304613 RGS3P49796 1198 aa18.66■□□□□ 0.58
KNDC1-201ENST00000304613 MAPK8IP3Q9UPT6 1336 aa18.66■□□□□ 0.58
KNDC1-201ENST00000304613 CARD11Q9BXL7 1154 aa18.64■□□□□ 0.57
KNDC1-201ENST00000304613 NAP1L2Q9ULW6 460 aaPredicted RBP18.63■□□□□ 0.57
KNDC1-201ENST00000304613 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
KNDC1-201ENST00000304613 OS9Q13438 667 aaPredicted RBP18.62■□□□□ 0.57
KNDC1-201ENST00000304613 CLIP1P30622 1438 aa18.62■□□□□ 0.57
KNDC1-201ENST00000304613 POGKQ9P215 609 aa18.62■□□□□ 0.57
KNDC1-201ENST00000304613 FGD1P98174 961 aa18.61■□□□□ 0.57
KNDC1-201ENST00000304613 CDCA8Q53HL2 280 aa18.61■□□□□ 0.57
KNDC1-201ENST00000304613 U2SURPO15042 1029 aaKnown RBP18.58■□□□□ 0.56
KNDC1-201ENST00000304613 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.56
KNDC1-201ENST00000304613 RTN4Q9NQC3 1192 aaKnown RBP18.58■□□□□ 0.56
KNDC1-201ENST00000304613 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
KNDC1-201ENST00000304613 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.56
KNDC1-201ENST00000304613 CFDP1Q9UEE9 299 aaPredicted RBP18.58■□□□□ 0.56
KNDC1-201ENST00000304613 NUDCQ9Y266 331 aa18.57■□□□□ 0.56
KNDC1-201ENST00000304613 KCNJ4P48050 445 aa18.57■□□□□ 0.56
KNDC1-201ENST00000304613 SOX12O15370 315 aa18.55■□□□□ 0.56
KNDC1-201ENST00000304613 NAP1L5Q96NT1 182 aaPredicted RBP18.55■□□□□ 0.56
KNDC1-201ENST00000304613 CCDC180Q9P1Z9 1646 aa18.55■□□□□ 0.56
KNDC1-201ENST00000304613 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
KNDC1-201ENST00000304613 HSP90AB1P08238 724 aaKnown RBP18.54■□□□□ 0.56
KNDC1-201ENST00000304613 GOLGA2Q08379 1002 aa18.54■□□□□ 0.56
KNDC1-201ENST00000304613 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
KNDC1-201ENST00000304613 CLSTN1O94985 981 aa18.48■□□□□ 0.55
KNDC1-201ENST00000304613 SIN3AQ96ST3 1273 aa18.47■□□□□ 0.55
KNDC1-201ENST00000304613 ERICH6BQ5W0A0 696 aa18.46■□□□□ 0.55
KNDC1-201ENST00000304613 GOLGA6L6A8MZA4 724 aa18.45■□□□□ 0.54
KNDC1-201ENST00000304613 ISY1Q9ULR0 285 aaKnown RBP18.45■□□□□ 0.54
KNDC1-201ENST00000304613 SPRYD3Q8NCJ5 442 aa18.44■□□□□ 0.54
KNDC1-201ENST00000304613 GOLGA6L4A6NEF3 574 aa18.43■□□□□ 0.54
KNDC1-201ENST00000304613 MLECQ14165 292 aa18.43■□□□□ 0.54
KNDC1-201ENST00000304613 B4GALNT3Q6L9W6 998 aa18.43■□□□□ 0.54
KNDC1-201ENST00000304613 BAZ1BQ9UIG0 1483 aaKnown RBP18.43■□□□□ 0.54
KNDC1-201ENST00000304613 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
KNDC1-201ENST00000304613 PPP4R2Q9NY27 417 aa18.42■□□□□ 0.54
KNDC1-201ENST00000304613 CHMP4BQ9H444 224 aaKnown RBP18.39■□□□□ 0.54
KNDC1-201ENST00000304613 NOP58Q9Y2X3 529 aaKnown RBP18.39■□□□□ 0.53
KNDC1-201ENST00000304613 SRPK2P78362 688 aaKnown RBP18.38■□□□□ 0.53
KNDC1-201ENST00000304613 NRDCO43847 1150 aa18.37■□□□□ 0.53
KNDC1-201ENST00000304613 APBB1O00213 710 aa18.37■□□□□ 0.53
KNDC1-201ENST00000304613 MS4A1P11836 297 aa18.36■□□□□ 0.53
KNDC1-201ENST00000304613 CEP162Q5TB80 1403 aa18.36■□□□□ 0.53
KNDC1-201ENST00000304613 DCAF11Q8TEB1 546 aa18.36■□□□□ 0.53
KNDC1-201ENST00000304613 HSCBQ8IWL3 235 aa18.36■□□□□ 0.53
KNDC1-201ENST00000304613 PNNQ9H307 717 aaKnown RBP18.35■□□□□ 0.53
KNDC1-201ENST00000304613 GOLGA3Q08378 1498 aa18.34■□□□□ 0.53
KNDC1-201ENST00000304613 DRC7Q8IY82 874 aa18.34■□□□□ 0.53
KNDC1-201ENST00000304613 TMF1P82094 1093 aa18.33■□□□□ 0.52
KNDC1-201ENST00000304613 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
KNDC1-201ENST00000304613 ZNF330Q9Y3S2 320 aaPredicted RBP18.3■□□□□ 0.52
KNDC1-201ENST00000304613 STK26Q9P289 416 aa18.3■□□□□ 0.52
KNDC1-201ENST00000304613 MCCP23508 829 aa18.29■□□□□ 0.52
KNDC1-201ENST00000304613 GNL2Q13823 731 aaKnown RBP18.29■□□□□ 0.52
KNDC1-201ENST00000304613 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
KNDC1-201ENST00000304613 CHAF1AQ13111 956 aaPredicted RBP18.28■□□□□ 0.52
KNDC1-201ENST00000304613 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
KNDC1-201ENST00000304613 NACADO15069 1562 aa18.28■□□□□ 0.52
KNDC1-201ENST00000304613 MSNP26038 577 aaKnown RBP18.26■□□□□ 0.51
KNDC1-201ENST00000304613 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms