RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 MYH16Q9H6N6 1097 aa22.38■■□□□ 1.17
PDS5A-201ENST00000303538 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
PDS5A-201ENST00000303538 TAOK2Q9UL54 1235 aa22.34■■□□□ 1.17
PDS5A-201ENST00000303538 PPM1GO15355 546 aaPredicted RBP22.32■■□□□ 1.16
PDS5A-201ENST00000303538 CCDC136Q96JN2 1154 aa22.32■■□□□ 1.16
PDS5A-201ENST00000303538 NCBP3Q53F19 620 aaKnown RBP22.31■■□□□ 1.16
PDS5A-201ENST00000303538 TPRNQ4KMQ1 711 aa22.3■■□□□ 1.16
PDS5A-201ENST00000303538 NBR1Q14596 966 aa22.3■■□□□ 1.16
PDS5A-201ENST00000303538 MLECQ14165 292 aa22.29■■□□□ 1.16
PDS5A-201ENST00000303538 HIRIP3Q9BW71 556 aaPredicted RBP22.28■■□□□ 1.16
PDS5A-201ENST00000303538 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.15
PDS5A-201ENST00000303538 IRX6P78412 446 aaPredicted RBP22.23■■□□□ 1.15
PDS5A-201ENST00000303538 RGL3Q3MIN7 710 aa22.23■■□□□ 1.15
PDS5A-201ENST00000303538 MRS2Q9HD23 443 aa22.22■■□□□ 1.15
PDS5A-201ENST00000303538 RRP7BPQ9NSQ0 103 aa22.15■■□□□ 1.14
PDS5A-201ENST00000303538 LAS1LQ9Y4W2 734 aaKnown RBP22.15■■□□□ 1.14
PDS5A-201ENST00000303538 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.14
PDS5A-201ENST00000303538 ERCC6Q03468 1493 aa22.14■■□□□ 1.13
PDS5A-201ENST00000303538 MTUS2Q5JR59 1369 aa22.12■■□□□ 1.13
PDS5A-201ENST00000303538 NCLP19338 710 aaKnown RBP22.08■■□□□ 1.13
PDS5A-201ENST00000303538 SOX12O15370 315 aa22.08■■□□□ 1.12
PDS5A-201ENST00000303538 AEBP2Q6ZN18 517 aaPredicted RBP22.07■■□□□ 1.12
PDS5A-201ENST00000303538 NEUROD2Q15784 382 aa22.05■■□□□ 1.12
PDS5A-201ENST00000303538 ZRSR1Q15695 479 aaKnown RBP22.04■■□□□ 1.12
PDS5A-201ENST00000303538 TNNT2P45379 298 aaPredicted RBP21.99■■□□□ 1.11
PDS5A-201ENST00000303538 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.99■■□□□ 1.11
PDS5A-201ENST00000303538 PLEKHD1A6NEE1 506 aa21.99■■□□□ 1.11
PDS5A-201ENST00000303538 CCDC9Q9Y3X0 531 aaKnown RBP21.99■■□□□ 1.11
PDS5A-201ENST00000303538 POGKQ9P215 609 aa21.98■■□□□ 1.11
PDS5A-201ENST00000303538 CFAP53Q96M91 514 aa21.97■■□□□ 1.11
PDS5A-201ENST00000303538 GOLGA2Q08379 1002 aa21.96■■□□□ 1.11
PDS5A-201ENST00000303538 NAP1L2Q9ULW6 460 aaPredicted RBP21.95■■□□□ 1.1
PDS5A-201ENST00000303538 FTSJ3Q8IY81 847 aaKnown RBP21.93■■□□□ 1.1
PDS5A-201ENST00000303538 CLSTN1O94985 981 aa21.93■■□□□ 1.1
PDS5A-201ENST00000303538 EIF4G2P78344 907 aaKnown RBP eCLIP21.92■■□□□ 1.12e-6■■□□□ 12.2
PDS5A-201ENST00000303538 OS9Q13438 667 aaPredicted RBP21.91■■□□□ 1.1
PDS5A-201ENST00000303538 ISY1Q9ULR0 285 aaKnown RBP21.91■■□□□ 1.1
PDS5A-201ENST00000303538 KNSTRNQ9Y448 316 aa21.89■■□□□ 1.1
PDS5A-201ENST00000303538 CASC1Q6TDU7 716 aa21.89■■□□□ 1.09
PDS5A-201ENST00000303538 GLIPR1L2Q4G1C9 344 aa21.87■■□□□ 1.09
PDS5A-201ENST00000303538 FGD1P98174 961 aa21.87■■□□□ 1.09
PDS5A-201ENST00000303538 TRIM44Q96DX7 344 aaPredicted RBP21.87■■□□□ 1.09
PDS5A-201ENST00000303538 MAPK8IP3Q9UPT6 1336 aa21.87■■□□□ 1.09
PDS5A-201ENST00000303538 PTMAP06454 111 aaKnown RBP21.86■■□□□ 1.09
PDS5A-201ENST00000303538 BECN1Q14457 450 aa21.86■■□□□ 1.09
PDS5A-201ENST00000303538 GOLGA6L22H0YM25 854 aa21.85■■□□□ 1.09
PDS5A-201ENST00000303538 PLCB2Q00722 1185 aa21.83■■□□□ 1.09
PDS5A-201ENST00000303538 U2SURPO15042 1029 aaKnown RBP21.82■■□□□ 1.08
PDS5A-201ENST00000303538 AMER1Q5JTC6 1135 aaPredicted RBP21.8■■□□□ 1.08
PDS5A-201ENST00000303538 KCNJ4P48050 445 aa21.8■■□□□ 1.08
PDS5A-201ENST00000303538 SAFB2Q14151 953 aaKnown RBP eCLIP21.8■■□□□ 1.08
PDS5A-201ENST00000303538 DNTTIP2Q5QJE6 756 aaKnown RBP21.8■■□□□ 1.08
PDS5A-201ENST00000303538 FRAT1Q92837 279 aaPredicted RBP21.8■■□□□ 1.08
PDS5A-201ENST00000303538 CFDP1Q9UEE9 299 aaPredicted RBP21.79■■□□□ 1.08
PDS5A-201ENST00000303538 ZNF330Q9Y3S2 320 aaPredicted RBP21.79■■□□□ 1.08
PDS5A-201ENST00000303538 PAK3O75914 559 aaPredicted RBP21.76■■□□□ 1.07
PDS5A-201ENST00000303538 CARD11Q9BXL7 1154 aa21.76■■□□□ 1.07
PDS5A-201ENST00000303538 NUDCQ9Y266 331 aa21.75■■□□□ 1.07
PDS5A-201ENST00000303538 CDCA8Q53HL2 280 aa21.74■■□□□ 1.07
PDS5A-201ENST00000303538 CC2D1BQ5T0F9 858 aaKnown RBP21.72■■□□□ 1.07
PDS5A-201ENST00000303538 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
PDS5A-201ENST00000303538 DDRGK1Q96HY6 314 aa21.69■■□□□ 1.06
PDS5A-201ENST00000303538 RGS3P49796 1198 aa21.68■■□□□ 1.06
PDS5A-201ENST00000303538 MIER1Q8N108 512 aa21.68■■□□□ 1.06
PDS5A-201ENST00000303538 CSB-PGBD3P0DP91 1061 aa21.65■■□□□ 1.06
PDS5A-201ENST00000303538 SRPK2P78362 688 aaKnown RBP21.64■■□□□ 1.06
PDS5A-201ENST00000303538 STK26Q9P289 416 aa21.64■■□□□ 1.05
PDS5A-201ENST00000303538 EIF4G1Q04637 1599 aaKnown RBP21.62■■□□□ 1.05
PDS5A-201ENST00000303538 ZCCHC6Q5VYS8 1495 aaKnown RBP21.61■■□□□ 1.05
PDS5A-201ENST00000303538 RSF1Q96T23 1441 aaPredicted RBP21.59■■□□□ 1.05
PDS5A-201ENST00000303538 KLHL34Q8N239 644 aa21.59■■□□□ 1.05
PDS5A-201ENST00000303538 HSP90AB1P08238 724 aaKnown RBP21.58■■□□□ 1.04
PDS5A-201ENST00000303538 CLIP1P30622 1438 aa21.57■■□□□ 1.04
PDS5A-201ENST00000303538 GGT6Q6P531 493 aa21.57■■□□□ 1.04
PDS5A-201ENST00000303538 SUPT16HQ9Y5B9 1047 aaKnown RBP21.55■■□□□ 1.04
PDS5A-201ENST00000303538 MEX3CQ5U5Q3 659 aaKnown RBP21.55■■□□□ 1.04
PDS5A-201ENST00000303538 APBB1O00213 710 aa21.55■■□□□ 1.04
PDS5A-201ENST00000303538 MSH5O43196 834 aa21.55■■□□□ 1.04
PDS5A-201ENST00000303538 ANP32EQ9BTT0 268 aa21.54■■□□□ 1.04
PDS5A-201ENST00000303538 GOLGA6L4A6NEF3 574 aa21.53■■□□□ 1.04
PDS5A-201ENST00000303538 HDGFP51858 240 aaKnown RBP21.53■■□□□ 1.04
PDS5A-201ENST00000303538 RTF1Q92541 710 aaKnown RBP21.52■■□□□ 1.04
PDS5A-201ENST00000303538 TMX4Q9H1E5 349 aaPredicted RBP21.52■■□□□ 1.04
PDS5A-201ENST00000303538 PRM3Q9NNZ6 103 aa21.52■■□□□ 1.04
PDS5A-201ENST00000303538 G3V3G9 751 aa21.5■■□□□ 1.03
PDS5A-201ENST00000303538 DCAF8Q5TAQ9 597 aa21.5■■□□□ 1.03
PDS5A-201ENST00000303538 GOLGA6L6A8MZA4 724 aa21.5■■□□□ 1.03
PDS5A-201ENST00000303538 GNL2Q13823 731 aaKnown RBP21.49■■□□□ 1.03
PDS5A-201ENST00000303538 PNNQ9H307 717 aaKnown RBP21.48■■□□□ 1.03
PDS5A-201ENST00000303538 DCAF11Q8TEB1 546 aa21.48■■□□□ 1.03
PDS5A-201ENST00000303538 NUTM2DQ5VT03 806 aaPredicted RBP21.47■■□□□ 1.03
PDS5A-201ENST00000303538 SPRYD3Q8NCJ5 442 aa21.47■■□□□ 1.03
PDS5A-201ENST00000303538 ANO8Q9HCE9 1232 aaPredicted RBP21.46■■□□□ 1.03
PDS5A-201ENST00000303538 CHMP4BQ9H444 224 aaKnown RBP21.43■■□□□ 1.02
PDS5A-201ENST00000303538 MORC1Q86VD1 984 aa21.42■■□□□ 1.02
PDS5A-201ENST00000303538 CHMP3Q9Y3E7 222 aa21.42■■□□□ 1.02
PDS5A-201ENST00000303538 KANK1Q14678 1352 aa21.42■■□□□ 1.02
PDS5A-201ENST00000303538 PDE4CQ08493 712 aa21.42■■□□□ 1.02
PDS5A-201ENST00000303538 SIN3AQ96ST3 1273 aa21.41■■□□□ 1.02
PDS5A-201ENST00000303538 NUTM2FA1L443 756 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms