RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 GGT6Q6P531 493 aa9.63□□□□□ -0.87
RAG1-201ENST00000299440 WDR43Q15061 677 aaKnown RBP eCLIP9.63□□□□□ -0.87
RAG1-201ENST00000299440 CYB5RLQ6IPT4 315 aa9.63□□□□□ -0.87
RAG1-201ENST00000299440 RTL5Q5HYW3 569 aaPredicted RBP9.61□□□□□ -0.87
RAG1-201ENST00000299440 EIF4G1Q04637 1599 aaKnown RBP9.61□□□□□ -0.87
RAG1-201ENST00000299440 ZCCHC6Q5VYS8 1495 aaKnown RBP9.6□□□□□ -0.87
RAG1-201ENST00000299440 FAM9BQ8IZU0 186 aa9.6□□□□□ -0.87
RAG1-201ENST00000299440 HDGFP51858 240 aaKnown RBP9.58□□□□□ -0.88
RAG1-201ENST00000299440 SAFB2Q14151 953 aaKnown RBP eCLIP9.57□□□□□ -0.88
RAG1-201ENST00000299440 NACADO15069 1562 aa9.56□□□□□ -0.88
RAG1-201ENST00000299440 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
RAG1-201ENST00000299440 TULP1O00294 542 aaPredicted RBP9.56□□□□□ -0.88
RAG1-201ENST00000299440 CECR2Q9BXF3 1484 aa9.55□□□□□ -0.88
RAG1-201ENST00000299440 PAK3O75914 559 aaPredicted RBP9.55□□□□□ -0.88
RAG1-201ENST00000299440 CCDC180Q9P1Z9 1646 aa9.55□□□□□ -0.88
RAG1-201ENST00000299440 HSP90AA1P07900 732 aaKnown RBP9.55□□□□□ -0.88
RAG1-201ENST00000299440 PHF23Q9BUL5 403 aaPredicted RBP9.55□□□□□ -0.88
RAG1-201ENST00000299440 CSB-PGBD3P0DP91 1061 aa9.53□□□□□ -0.88
RAG1-201ENST00000299440 TNNT2P45379 298 aaPredicted RBP9.53□□□□□ -0.88
RAG1-201ENST00000299440 HIRIP3Q9BW71 556 aaPredicted RBP9.53□□□□□ -0.88
RAG1-201ENST00000299440 KIF27Q86VH2 1401 aa9.53□□□□□ -0.88
RAG1-201ENST00000299440 STK26Q9P289 416 aa9.53□□□□□ -0.88
RAG1-201ENST00000299440 LAS1LQ9Y4W2 734 aaKnown RBP9.53□□□□□ -0.88
RAG1-201ENST00000299440 DDX10Q13206 875 aaKnown RBP9.52□□□□□ -0.88
RAG1-201ENST00000299440 KANK1Q14678 1352 aa9.52□□□□□ -0.89
RAG1-201ENST00000299440 CLIP1P30622 1438 aa9.51□□□□□ -0.89
RAG1-201ENST00000299440 PDS5BQ9NTI5 1447 aa9.51□□□□□ -0.89
RAG1-201ENST00000299440 MYH16Q9H6N6 1097 aa9.51□□□□□ -0.89
RAG1-201ENST00000299440 WRNQ14191 1432 aaPredicted RBP eCLIP9.5□□□□□ -0.89
RAG1-201ENST00000299440 CFAP53Q96M91 514 aa9.5□□□□□ -0.89
RAG1-201ENST00000299440 CCNB3Q8WWL7 1395 aa9.49□□□□□ -0.89
RAG1-201ENST00000299440 OSCARQ8IYS5 282 aa9.49□□□□□ -0.89
RAG1-201ENST00000299440 SRPK2P78362 688 aaKnown RBP9.49□□□□□ -0.89
RAG1-201ENST00000299440 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
RAG1-201ENST00000299440 HNRNPUQ00839 825 aaKnown RBP eCLIP9.49□□□□□ -0.89
RAG1-201ENST00000299440 MEX3CQ5U5Q3 659 aaKnown RBP9.49□□□□□ -0.89
RAG1-201ENST00000299440 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
RAG1-201ENST00000299440 NEUROD2Q15784 382 aa9.48□□□□□ -0.89
RAG1-201ENST00000299440 TDRD9Q8NDG6 1382 aaKnown RBP9.48□□□□□ -0.89
RAG1-201ENST00000299440 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
RAG1-201ENST00000299440 GOLGA2Q08379 1002 aa9.47□□□□□ -0.89
RAG1-201ENST00000299440 EID1Q9Y6B2 187 aa9.46□□□□□ -0.89
RAG1-201ENST00000299440 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.46□□□□□ -0.9
RAG1-201ENST00000299440 KNSTRNQ9Y448 316 aa9.46□□□□□ -0.9
RAG1-201ENST00000299440 CUX2O14529 1486 aa9.46□□□□□ -0.9
RAG1-201ENST00000299440 CARMIL2Q6F5E8 1435 aa9.46□□□□□ -0.9
RAG1-201ENST00000299440 CARD11Q9BXL7 1154 aa9.45□□□□□ -0.9
RAG1-201ENST00000299440 MRS2Q9HD23 443 aa9.45□□□□□ -0.9
RAG1-201ENST00000299440 MAPK8IP3Q9UPT6 1336 aa9.44□□□□□ -0.9
RAG1-201ENST00000299440 U2SURPO15042 1029 aaKnown RBP9.44□□□□□ -0.9
RAG1-201ENST00000299440 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
RAG1-201ENST00000299440 UPF2Q9HAU5 1272 aaKnown RBP9.44□□□□□ -0.9
RAG1-201ENST00000299440 NUTM2DQ5VT03 806 aaPredicted RBP9.44□□□□□ -0.9
RAG1-201ENST00000299440 CDK11BP21127 795 aaKnown RBP9.44□□□□□ -0.9
RAG1-201ENST00000299440 NUTM2FA1L443 756 aa9.43□□□□□ -0.9
RAG1-201ENST00000299440 EIF4G2P78344 907 aaKnown RBP eCLIP9.43□□□□□ -0.9
RAG1-201ENST00000299440 ISY1Q9ULR0 285 aaKnown RBP9.43□□□□□ -0.9
RAG1-201ENST00000299440 MSH5O43196 834 aa9.42□□□□□ -0.9
RAG1-201ENST00000299440 EFCAB2Q5VUJ9 269 aa9.42□□□□□ -0.9
RAG1-201ENST00000299440 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
RAG1-201ENST00000299440 CARMIL1Q5VZK9 1371 aa9.42□□□□□ -0.9
RAG1-201ENST00000299440 KLHL34Q8N239 644 aa9.41□□□□□ -0.9
RAG1-201ENST00000299440 NUDCQ9Y266 331 aa9.41□□□□□ -0.9
RAG1-201ENST00000299440 KIF3BO15066 747 aa9.4□□□□□ -0.9
RAG1-201ENST00000299440 SOGA1O94964 1423 aa9.4□□□□□ -0.9
RAG1-201ENST00000299440 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.91
RAG1-201ENST00000299440 OS9Q13438 667 aaPredicted RBP9.39□□□□□ -0.91
RAG1-201ENST00000299440 DCAF11Q8TEB1 546 aa9.39□□□□□ -0.91
RAG1-201ENST00000299440 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
RAG1-201ENST00000299440 WASHC2CQ9Y4E1 1318 aa9.38□□□□□ -0.91
RAG1-201ENST00000299440 GOLGA3Q08378 1498 aa9.38□□□□□ -0.91
RAG1-201ENST00000299440 NCBP3Q53F19 620 aaKnown RBP9.37□□□□□ -0.91
RAG1-201ENST00000299440 NGDNQ8NEJ9 315 aaKnown RBP9.36□□□□□ -0.91
RAG1-201ENST00000299440 CC2D1BQ5T0F9 858 aaKnown RBP9.36□□□□□ -0.91
RAG1-201ENST00000299440 DCAF8L1A6NGE4 600 aa9.36□□□□□ -0.91
RAG1-201ENST00000299440 G3V3G9 751 aa9.35□□□□□ -0.91
RAG1-201ENST00000299440 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
RAG1-201ENST00000299440 ANP32AP39687 249 aaKnown RBP9.35□□□□□ -0.91
RAG1-201ENST00000299440 SMARCA2P51531 1590 aa9.35□□□□□ -0.91
RAG1-201ENST00000299440 BAZ1AQ9NRL2 1556 aaPredicted RBP9.35□□□□□ -0.91
RAG1-201ENST00000299440 JPH4Q96JJ6 628 aa9.34□□□□□ -0.91
RAG1-201ENST00000299440 EVA1CP58658 441 aa9.34□□□□□ -0.91
RAG1-201ENST00000299440 RTF1Q92541 710 aaKnown RBP9.34□□□□□ -0.91
RAG1-201ENST00000299440 HDGFL2Q7Z4V5 671 aaPredicted RBP9.34□□□□□ -0.91
RAG1-201ENST00000299440 FTSJ3Q8IY81 847 aaKnown RBP9.34□□□□□ -0.92
RAG1-201ENST00000299440 LTV1Q96GA3 475 aaPredicted RBP9.33□□□□□ -0.92
RAG1-201ENST00000299440 HNRNPMP52272 730 aaKnown RBP eCLIP9.33□□□□□ -0.92
RAG1-201ENST00000299440 CEP164Q9UPV0 1460 aa9.33□□□□□ -0.92
RAG1-201ENST00000299440 SPAG9O60271 1321 aaKnown RBP9.32□□□□□ -0.92
RAG1-201ENST00000299440 TPRNQ4KMQ1 711 aa9.32□□□□□ -0.92
RAG1-201ENST00000299440 CLSTN1O94985 981 aa9.31□□□□□ -0.92
RAG1-201ENST00000299440 CCDC136Q96JN2 1154 aa9.31□□□□□ -0.92
RAG1-201ENST00000299440 NAP1L2Q9ULW6 460 aaPredicted RBP9.31□□□□□ -0.92
RAG1-201ENST00000299440 GTF2E1P29083 439 aaPredicted RBP9.31□□□□□ -0.92
RAG1-201ENST00000299440 EEA1Q15075 1411 aa9.31□□□□□ -0.92
RAG1-201ENST00000299440 CEP162Q5TB80 1403 aa9.31□□□□□ -0.92
RAG1-201ENST00000299440 ANP32BQ92688 251 aaKnown RBP9.3□□□□□ -0.92
RAG1-201ENST00000299440 FKBP8Q14318 412 aa9.3□□□□□ -0.92
RAG1-201ENST00000299440 MORC1Q86VD1 984 aa9.3□□□□□ -0.92
RAG1-201ENST00000299440 TMF1P82094 1093 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms