RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 C14orf37Q86TY3 774 aa21.96■■□□□ 1.11
ARHGEF40-201ENST00000298694 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
ARHGEF40-201ENST00000298694 RRP7BPQ9NSQ0 103 aa21.92■■□□□ 1.1
ARHGEF40-201ENST00000298694 EIF4G2P78344 907 aaKnown RBP eCLIP21.89■■□□□ 1.09
ARHGEF40-201ENST00000298694 KCNH8Q96L42 1107 aa21.87■■□□□ 1.09
ARHGEF40-201ENST00000298694 CDK11BP21127 795 aaKnown RBP21.86■■□□□ 1.09
ARHGEF40-201ENST00000298694 MIER1Q8N108 512 aa21.85■■□□□ 1.09
ARHGEF40-201ENST00000298694 GLIPR1L2Q4G1C9 344 aa21.85■■□□□ 1.09
ARHGEF40-201ENST00000298694 CLIP1P30622 1438 aa21.83■■□□□ 1.08
ARHGEF40-201ENST00000298694 RGL3Q3MIN7 710 aa21.79■■□□□ 1.08
ARHGEF40-201ENST00000298694 BECN1Q14457 450 aa21.76■■□□□ 1.07
ARHGEF40-201ENST00000298694 NCLP19338 710 aaKnown RBP21.76■■□□□ 1.07
ARHGEF40-201ENST00000298694 PLEKHD1A6NEE1 506 aa21.74■■□□□ 1.07
ARHGEF40-201ENST00000298694 SENP3-EIF4A1A0A087X0R7 540 aa21.74■■□□□ 1.07
ARHGEF40-201ENST00000298694 HAP1P54257 671 aaPredicted RBP21.73■■□□□ 1.07
ARHGEF40-201ENST00000298694 DDRGK1Q96HY6 314 aa21.73■■□□□ 1.07
ARHGEF40-201ENST00000298694 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
ARHGEF40-201ENST00000298694 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
ARHGEF40-201ENST00000298694 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
ARHGEF40-201ENST00000298694 PPM1GO15355 546 aaPredicted RBP21.71■■□□□ 1.07
ARHGEF40-201ENST00000298694 ARID4BQ4LE39 1312 aaPredicted RBP21.7■■□□□ 1.06
ARHGEF40-201ENST00000298694 KNSTRNQ9Y448 316 aa21.67■■□□□ 1.06
ARHGEF40-201ENST00000298694 GOLGA6L22H0YM25 854 aa21.66■■□□□ 1.06
ARHGEF40-201ENST00000298694 TRIM44Q96DX7 344 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF40-201ENST00000298694 CDCA8Q53HL2 280 aa21.64■■□□□ 1.05
ARHGEF40-201ENST00000298694 FTSJ3Q8IY81 847 aaKnown RBP21.63■■□□□ 1.05
ARHGEF40-201ENST00000298694 CASC1Q6TDU7 716 aa21.62■■□□□ 1.05
ARHGEF40-201ENST00000298694 LAS1LQ9Y4W2 734 aaKnown RBP21.62■■□□□ 1.05
ARHGEF40-201ENST00000298694 TPRNQ4KMQ1 711 aa21.61■■□□□ 1.05
ARHGEF40-201ENST00000298694 CARD11Q9BXL7 1154 aa21.61■■□□□ 1.05
ARHGEF40-201ENST00000298694 CFDP1Q9UEE9 299 aaPredicted RBP21.61■■□□□ 1.05
ARHGEF40-201ENST00000298694 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
ARHGEF40-201ENST00000298694 NEUROD2Q15784 382 aa21.6■■□□□ 1.05
ARHGEF40-201ENST00000298694 ZRSR1Q15695 479 aaKnown RBP21.58■■□□□ 1.05
ARHGEF40-201ENST00000298694 MAPK8IP3Q9UPT6 1336 aa21.57■■□□□ 1.04
ARHGEF40-201ENST00000298694 ANP32EQ9BTT0 268 aa21.57■■□□□ 1.04
ARHGEF40-201ENST00000298694 CEP162Q5TB80 1403 aa21.56■■□□□ 1.04
ARHGEF40-201ENST00000298694 PTMAP06454 111 aaKnown RBP21.54■■□□□ 1.04
ARHGEF40-201ENST00000298694 LMOD2Q6P5Q4 547 aa21.53■■□□□ 1.04
ARHGEF40-201ENST00000298694 TULP1O00294 542 aaPredicted RBP21.52■■□□□ 1.04
ARHGEF40-201ENST00000298694 SUPT16HQ9Y5B9 1047 aaKnown RBP21.52■■□□□ 1.04
ARHGEF40-201ENST00000298694 POGKQ9P215 609 aa21.52■■□□□ 1.04
ARHGEF40-201ENST00000298694 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
ARHGEF40-201ENST00000298694 TNNT2P45379 298 aaPredicted RBP21.5■■□□□ 1.03
ARHGEF40-201ENST00000298694 EEA1Q15075 1411 aa21.47■■□□□ 1.03
ARHGEF40-201ENST00000298694 FRAT1Q92837 279 aaPredicted RBP21.47■■□□□ 1.03
ARHGEF40-201ENST00000298694 TAOK2Q9UL54 1235 aa21.47■■□□□ 1.03
ARHGEF40-201ENST00000298694 CC2D1BQ5T0F9 858 aaKnown RBP21.45■■□□□ 1.02
ARHGEF40-201ENST00000298694 NPHP1O15259 732 aa21.44■■□□□ 1.02
ARHGEF40-201ENST00000298694 RGS3P49796 1198 aa21.44■■□□□ 1.02
ARHGEF40-201ENST00000298694 DNTTIP2Q5QJE6 756 aaKnown RBP21.43■■□□□ 1.02
ARHGEF40-201ENST00000298694 OS9Q13438 667 aaPredicted RBP21.42■■□□□ 1.02
ARHGEF40-201ENST00000298694 WRNQ14191 1432 aaPredicted RBP eCLIP21.41■■□□□ 1.02
ARHGEF40-201ENST00000298694 U2SURPO15042 1029 aaKnown RBP21.41■■□□□ 1.02
ARHGEF40-201ENST00000298694 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
ARHGEF40-201ENST00000298694 SIN3AQ96ST3 1273 aa21.4■■□□□ 1.02
ARHGEF40-201ENST00000298694 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
ARHGEF40-201ENST00000298694 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
ARHGEF40-201ENST00000298694 PLCB2Q00722 1185 aa21.35■■□□□ 1.01
ARHGEF40-201ENST00000298694 FGD1P98174 961 aa21.34■■□□□ 1.01
ARHGEF40-201ENST00000298694 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
ARHGEF40-201ENST00000298694 HSP90AB1P08238 724 aaKnown RBP21.34■■□□□ 1.01
ARHGEF40-201ENST00000298694 CHMP4BQ9H444 224 aaKnown RBP21.34■■□□□ 1.01
ARHGEF40-201ENST00000298694 PPP4R2Q9NY27 417 aa21.34■■□□□ 1.01
ARHGEF40-201ENST00000298694 NAP1L2Q9ULW6 460 aaPredicted RBP21.32■■□□□ 1
ARHGEF40-201ENST00000298694 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
ARHGEF40-201ENST00000298694 KCNJ4P48050 445 aa21.31■■□□□ 1
ARHGEF40-201ENST00000298694 MS4A1P11836 297 aa21.3■■□□□ 1
ARHGEF40-201ENST00000298694 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
ARHGEF40-201ENST00000298694 CCNB3Q8WWL7 1395 aa21.29■■□□□ 1
ARHGEF40-201ENST00000298694 ERCC6Q03468 1493 aa21.29■■□□□ 1
ARHGEF40-201ENST00000298694 TNIKQ9UKE5 1360 aa21.29■■□□□ 1
ARHGEF40-201ENST00000298694 TMF1P82094 1093 aa21.28■■□□□ 1
ARHGEF40-201ENST00000298694 GOLGA2Q08379 1002 aa21.28■■□□□ 1
ARHGEF40-201ENST00000298694 CCDC180Q9P1Z9 1646 aa21.28■■□□□ 1
ARHGEF40-201ENST00000298694 SOX12O15370 315 aa21.28■■□□□ 1
ARHGEF40-201ENST00000298694 DCAF11Q8TEB1 546 aa21.27■■□□□ 1
ARHGEF40-201ENST00000298694 GOLGA6L6A8MZA4 724 aa21.24■□□□□ 0.99
ARHGEF40-201ENST00000298694 KANK1Q14678 1352 aa21.24■□□□□ 0.99
ARHGEF40-201ENST00000298694 NAP1L5Q96NT1 182 aaPredicted RBP21.23■□□□□ 0.99
ARHGEF40-201ENST00000298694 SRPK2P78362 688 aaKnown RBP21.23■□□□□ 0.99
ARHGEF40-201ENST00000298694 MLECQ14165 292 aa21.23■□□□□ 0.99
ARHGEF40-201ENST00000298694 NOP58Q9Y2X3 529 aaKnown RBP21.22■□□□□ 0.99
ARHGEF40-201ENST00000298694 ERICH6BQ5W0A0 696 aa21.22■□□□□ 0.99
ARHGEF40-201ENST00000298694 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
ARHGEF40-201ENST00000298694 B4GALNT3Q6L9W6 998 aa21.21■□□□□ 0.99
ARHGEF40-201ENST00000298694 SAFB2Q14151 953 aaKnown RBP eCLIP21.2■□□□□ 0.98
ARHGEF40-201ENST00000298694 MORC1Q86VD1 984 aa21.19■□□□□ 0.98
ARHGEF40-201ENST00000298694 HSCBQ8IWL3 235 aa21.18■□□□□ 0.98
ARHGEF40-201ENST00000298694 RTN4Q9NQC3 1192 aaKnown RBP21.17■□□□□ 0.98
ARHGEF40-201ENST00000298694 GOLGA6L4A6NEF3 574 aa21.17■□□□□ 0.98
ARHGEF40-201ENST00000298694 HDGFP51858 240 aaKnown RBP21.16■□□□□ 0.98
ARHGEF40-201ENST00000298694 TRHP20396 242 aaPredicted RBP21.14■□□□□ 0.97
ARHGEF40-201ENST00000298694 MCCP23508 829 aa21.13■□□□□ 0.97
ARHGEF40-201ENST00000298694 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
ARHGEF40-201ENST00000298694 NRDCO43847 1150 aa21.12■□□□□ 0.97
ARHGEF40-201ENST00000298694 SPRYD3Q8NCJ5 442 aa21.12■□□□□ 0.97
ARHGEF40-201ENST00000298694 RTF1Q92541 710 aaKnown RBP21.12■□□□□ 0.97
ARHGEF40-201ENST00000298694 STK26Q9P289 416 aa21.1■□□□□ 0.97
ARHGEF40-201ENST00000298694 CLSTN1O94985 981 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms