RNA–Protein interactions for RNA: ENST00000297785.7

ALDH1A1-201, Transcript of aldehyde dehydrogenase 1 family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALDH1A1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1-201ENST00000297785 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
ALDH1A1-201ENST00000297785 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.14□□□□□ -0.31
ALDH1A1-201ENST00000297785 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
ALDH1A1-201ENST00000297785 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
ALDH1A1-201ENST00000297785 ZMYND15Q9H091 742 aa13.11□□□□□ -0.31
ALDH1A1-201ENST00000297785 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
ALDH1A1-201ENST00000297785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
ALDH1A1-201ENST00000297785 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
ALDH1A1-201ENST00000297785 ARID3CA6NKF2 412 aa13.09□□□□□ -0.31
ALDH1A1-201ENST00000297785 IGSF3O75054 1194 aa13.09□□□□□ -0.31
ALDH1A1-201ENST00000297785 MYT1Q01538 1121 aa13.07□□□□□ -0.32
ALDH1A1-201ENST00000297785 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
ALDH1A1-201ENST00000297785 ZCCHC6Q5VYS8 1495 aaKnown RBP13.05□□□□□ -0.32
ALDH1A1-201ENST00000297785 SLC24A3Q9HC58 644 aa13.05□□□□□ -0.32
ALDH1A1-201ENST00000297785 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
ALDH1A1-201ENST00000297785 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.32
ALDH1A1-201ENST00000297785 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.33
ALDH1A1-201ENST00000297785 DCAF1Q9Y4B6 1507 aa13.01□□□□□ -0.33
ALDH1A1-201ENST00000297785 ZBTB7CA1YPR0 619 aa12.99□□□□□ -0.33
ALDH1A1-201ENST00000297785 NACADO15069 1562 aa12.99□□□□□ -0.33
ALDH1A1-201ENST00000297785 RNF25Q96BH1 459 aaPredicted RBP12.97□□□□□ -0.33
ALDH1A1-201ENST00000297785 SHROOM4Q9ULL8 1493 aa12.96□□□□□ -0.34
ALDH1A1-201ENST00000297785 KCNV2Q8TDN2 545 aa12.95□□□□□ -0.34
ALDH1A1-201ENST00000297785 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
ALDH1A1-201ENST00000297785 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
ALDH1A1-201ENST00000297785 PDIA4P13667 645 aaKnown RBP12.93□□□□□ -0.34
ALDH1A1-201ENST00000297785 RB1CC1Q8TDY2 1594 aa12.93□□□□□ -0.34
ALDH1A1-201ENST00000297785 APBB1O00213 710 aa12.88□□□□□ -0.35
ALDH1A1-201ENST00000297785 ZNF428Q96B54 188 aa12.85□□□□□ -0.35
ALDH1A1-201ENST00000297785 GPBP1L1Q9HC44 474 aaPredicted RBP12.85□□□□□ -0.35
ALDH1A1-201ENST00000297785 P3H3Q8IVL6 736 aa12.83□□□□□ -0.36
ALDH1A1-201ENST00000297785 KCTD17Q8N5Z5 321 aa12.81□□□□□ -0.36
ALDH1A1-201ENST00000297785 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
ALDH1A1-201ENST00000297785 IL27Q8NEV9 243 aa12.79□□□□□ -0.36
ALDH1A1-201ENST00000297785 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
ALDH1A1-201ENST00000297785 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
ALDH1A1-201ENST00000297785 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
ALDH1A1-201ENST00000297785 RAD21O60216 631 aa12.75□□□□□ -0.37
ALDH1A1-201ENST00000297785 POLA2Q14181 598 aa12.71□□□□□ -0.37
ALDH1A1-201ENST00000297785 CCDC82Q8N4S0 544 aa12.71□□□□□ -0.37
ALDH1A1-201ENST00000297785 MTMR7Q9Y216 660 aa12.71□□□□□ -0.38
ALDH1A1-201ENST00000297785 CADPS2Q86UW7 1296 aa12.7□□□□□ -0.38
ALDH1A1-201ENST00000297785 RGS22Q8NE09 1264 aa12.7□□□□□ -0.38
ALDH1A1-201ENST00000297785 FOXD4L5Q5VV16 416 aaPredicted RBP12.68□□□□□ -0.38
ALDH1A1-201ENST00000297785 FOXD4L4Q8WXT5 416 aaPredicted RBP12.68□□□□□ -0.38
ALDH1A1-201ENST00000297785 MIER1Q8N108 512 aa12.67□□□□□ -0.38
ALDH1A1-201ENST00000297785 STK25O00506 426 aa12.64□□□□□ -0.39
ALDH1A1-201ENST00000297785 SEMA3EO15041 775 aa12.64□□□□□ -0.39
ALDH1A1-201ENST00000297785 ZMYND10O75800 440 aa12.64□□□□□ -0.39
ALDH1A1-201ENST00000297785 CDK11BP21127 795 aaKnown RBP12.63□□□□□ -0.39
ALDH1A1-201ENST00000297785 CDK11AQ9UQ88 783 aaPredicted RBP12.63□□□□□ -0.39
ALDH1A1-201ENST00000297785 CHMP4AQ9BY43 222 aa12.62□□□□□ -0.39
ALDH1A1-201ENST00000297785 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
ALDH1A1-201ENST00000297785 AEBP1Q8IUX7 1158 aa12.61□□□□□ -0.39
ALDH1A1-201ENST00000297785 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
ALDH1A1-201ENST00000297785 UNC13AQ9UPW8 1703 aa12.56□□□□□ -0.4
ALDH1A1-201ENST00000297785 KDM4CQ9H3R0 1056 aa12.55□□□□□ -0.4
ALDH1A1-201ENST00000297785 SCRIBQ14160 1630 aa12.55□□□□□ -0.4
ALDH1A1-201ENST00000297785 CLUAP1Q96AJ1 413 aa12.52□□□□□ -0.4
ALDH1A1-201ENST00000297785 WDR70Q9NW82 654 aa12.52□□□□□ -0.4
ALDH1A1-201ENST00000297785 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.4
ALDH1A1-201ENST00000297785 BICRAQ9NZM4 1560 aa12.52□□□□□ -0.4
ALDH1A1-201ENST00000297785 HSP90B1P14625 803 aaKnown RBP12.51□□□□□ -0.41
ALDH1A1-201ENST00000297785 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
ALDH1A1-201ENST00000297785 TESPA1A2RU30 521 aaPredicted RBP12.49□□□□□ -0.41
ALDH1A1-201ENST00000297785 MFAP1P55081 439 aaKnown RBP12.48□□□□□ -0.41
ALDH1A1-201ENST00000297785 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
ALDH1A1-201ENST00000297785 TMCO4Q5TGY1 634 aa12.46□□□□□ -0.42
ALDH1A1-201ENST00000297785 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
ALDH1A1-201ENST00000297785 TRAIPQ9BWF2 469 aa12.44□□□□□ -0.42
ALDH1A1-201ENST00000297785 BCL11BQ9C0K0 894 aaPredicted RBP12.44□□□□□ -0.42
ALDH1A1-201ENST00000297785 BARGINQ6ZT62 677 aa12.43□□□□□ -0.42
ALDH1A1-201ENST00000297785 GZF1Q9H116 711 aaPredicted RBP12.43□□□□□ -0.42
ALDH1A1-201ENST00000297785 FAM117AQ9C073 453 aa12.42□□□□□ -0.42
ALDH1A1-201ENST00000297785 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
ALDH1A1-201ENST00000297785 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
ALDH1A1-201ENST00000297785 ONECUT3O60422 494 aaPredicted RBP12.38□□□□□ -0.43
ALDH1A1-201ENST00000297785 ABCB7O75027 752 aa12.38□□□□□ -0.43
ALDH1A1-201ENST00000297785 TRAK2O60296 914 aa12.38□□□□□ -0.43
ALDH1A1-201ENST00000297785 ARHGEF1Q92888 912 aaKnown RBP12.37□□□□□ -0.43
ALDH1A1-201ENST00000297785 HMGB1P09429 215 aaKnown RBP12.37□□□□□ -0.43
ALDH1A1-201ENST00000297785 AK7Q96M32 723 aa12.36□□□□□ -0.43
ALDH1A1-201ENST00000297785 IRF5Q13568 498 aa12.35□□□□□ -0.43
ALDH1A1-201ENST00000297785 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.35□□□□□ -0.43
ALDH1A1-201ENST00000297785 RETREG2Q8NC44 543 aa12.35□□□□□ -0.43
ALDH1A1-201ENST00000297785 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
ALDH1A1-201ENST00000297785 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
ALDH1A1-201ENST00000297785 CAPN15O75808 1086 aa12.33□□□□□ -0.44
ALDH1A1-201ENST00000297785 DHX37Q8IY37 1157 aaKnown RBP12.33□□□□□ -0.44
ALDH1A1-201ENST00000297785 PDE4DQ08499 809 aa12.32□□□□□ -0.44
ALDH1A1-201ENST00000297785 USP35Q9P2H5 1018 aa12.32□□□□□ -0.44
ALDH1A1-201ENST00000297785 ZNF777Q9ULD5 760 aaPredicted RBP12.32□□□□□ -0.44
ALDH1A1-201ENST00000297785 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
ALDH1A1-201ENST00000297785 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
ALDH1A1-201ENST00000297785 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
ALDH1A1-201ENST00000297785 TRIM66O15016 1216 aa12.28□□□□□ -0.44
ALDH1A1-201ENST00000297785 FLIIQ13045 1269 aa12.26□□□□□ -0.45
ALDH1A1-201ENST00000297785 RBM26Q5T8P6 1007 aaKnown RBP12.26□□□□□ -0.45
ALDH1A1-201ENST00000297785 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
ALDH1A1-201ENST00000297785 E9PSI1 815 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms