RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 TSPYL2Q9H2G4 693 aaPredicted RBP15.81■□□□□ 0.12
PRKAA1-201ENST00000296800 ATMINO43313 823 aaPredicted RBP15.8■□□□□ 0.12
PRKAA1-201ENST00000296800 METRNQ9UJH8 293 aa15.8■□□□□ 0.12
PRKAA1-201ENST00000296800 POTEJP0CG39 1038 aa15.74■□□□□ 0.11
PRKAA1-201ENST00000296800 POTEMA6NI47 508 aa15.73■□□□□ 0.11
PRKAA1-201ENST00000296800 SLC39A7Q92504 469 aa15.73■□□□□ 0.11
PRKAA1-201ENST00000296800 C7P10643 843 aa15.72■□□□□ 0.11
PRKAA1-201ENST00000296800 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.11
PRKAA1-201ENST00000296800 POTEGQ6S5H5 508 aa15.68■□□□□ 0.1
PRKAA1-201ENST00000296800 ATN1P54259 1190 aaPredicted RBP15.66■□□□□ 0.1
PRKAA1-201ENST00000296800 KIF12Q96FN5 646 aa15.65■□□□□ 0.1
PRKAA1-201ENST00000296800 TRPC6Q9Y210 931 aa15.61■□□□□ 0.09
PRKAA1-201ENST00000296800 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.08
PRKAA1-201ENST00000296800 MAMSTRQ6ZN01 415 aa15.57■□□□□ 0.08
PRKAA1-201ENST00000296800 MIER1Q8N108 512 aa15.56■□□□□ 0.08
PRKAA1-201ENST00000296800 MAP3K13O43283 966 aa15.55■□□□□ 0.08
PRKAA1-201ENST00000296800 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
PRKAA1-201ENST00000296800 POTEFA5A3E0 1075 aa15.53■□□□□ 0.08
PRKAA1-201ENST00000296800 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
PRKAA1-201ENST00000296800 SCUBE2Q9NQ36 999 aa15.5■□□□□ 0.07
PRKAA1-201ENST00000296800 FKBP8Q14318 412 aa15.49■□□□□ 0.07
PRKAA1-201ENST00000296800 LCE2DQ5TA82 110 aaPredicted RBP15.49■□□□□ 0.07
PRKAA1-201ENST00000296800 FAM163AQ96GL9 167 aaPredicted RBP15.47■□□□□ 0.07
PRKAA1-201ENST00000296800 TIE1P35590 1138 aa15.46■□□□□ 0.07
PRKAA1-201ENST00000296800 TTLL13PA6NNM8 815 aa15.41■□□□□ 0.06
PRKAA1-201ENST00000296800 PCDH10Q9P2E7 1040 aa15.41■□□□□ 0.06
PRKAA1-201ENST00000296800 COLQQ9Y215 455 aaPredicted RBP15.4■□□□□ 0.06
PRKAA1-201ENST00000296800 PLCD3Q8N3E9 789 aa15.39■□□□□ 0.05
PRKAA1-201ENST00000296800 SEC24BO95487 1268 aa15.35■□□□□ 0.05
PRKAA1-201ENST00000296800 PCDHB13Q9Y5F0 798 aa15.33■□□□□ 0.04
PRKAA1-201ENST00000296800 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
PRKAA1-201ENST00000296800 NUBP1P53384 320 aa15.29■□□□□ 0.04
PRKAA1-201ENST00000296800 SGIP1Q9BQI5 828 aa15.28■□□□□ 0.04
PRKAA1-201ENST00000296800 ZBTB47Q9UFB7 747 aaPredicted RBP15.27■□□□□ 0.04
PRKAA1-201ENST00000296800 IER5LQ5T953 404 aa15.24■□□□□ 0.03
PRKAA1-201ENST00000296800 IFNL1Q8IU54 200 aa15.24■□□□□ 0.03
PRKAA1-201ENST00000296800 TMEM106CQ9BVX2 250 aa15.18■□□□□ 0.02
PRKAA1-201ENST00000296800 FBXO3Q9UK99 471 aa15.18■□□□□ 0.02
PRKAA1-201ENST00000296800 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
PRKAA1-201ENST00000296800 SLAIN1Q8ND83 568 aa15.13■□□□□ 0.01
PRKAA1-201ENST00000296800 PLCG2P16885 1265 aa15.1■□□□□ 0.01
PRKAA1-201ENST00000296800 CDAN1Q8IWY9 1227 aa15.1■□□□□ 0.01
PRKAA1-201ENST00000296800 ST18O60284 1047 aa15.06■□□□□ 0
PRKAA1-201ENST00000296800 IRX5P78411 483 aaPredicted RBP15.06■□□□□ 0
PRKAA1-201ENST00000296800 PYGBP11216 843 aa15.03■□□□□ -0
PRKAA1-201ENST00000296800 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
PRKAA1-201ENST00000296800 VASPP50552 380 aaPredicted RBP14.98□□□□□ -0.01
PRKAA1-201ENST00000296800 OCEL1Q9H607 264 aa14.97□□□□□ -0.01
PRKAA1-201ENST00000296800 PCDHB8Q9UN66 801 aa14.97□□□□□ -0.01
PRKAA1-201ENST00000296800 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
PRKAA1-201ENST00000296800 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.86□□□□□ -0.03
PRKAA1-201ENST00000296800 TMEM121BQ9BXQ6 578 aaPredicted RBP14.82□□□□□ -0.04
PRKAA1-201ENST00000296800 GSE1Q14687 1217 aa14.81□□□□□ -0.04
PRKAA1-201ENST00000296800 MARVELD3Q96A59 401 aa14.81□□□□□ -0.04
PRKAA1-201ENST00000296800 SNPHO15079 494 aa14.79□□□□□ -0.04
PRKAA1-201ENST00000296800 PDCD7Q8N8D1 485 aaKnown RBP14.79□□□□□ -0.04
PRKAA1-201ENST00000296800 MMRN1Q13201 1228 aa14.74□□□□□ -0.05
PRKAA1-201ENST00000296800 SPNS2Q8IVW8 549 aa14.74□□□□□ -0.05
PRKAA1-201ENST00000296800 ZNF467Q7Z7K2 595 aaPredicted RBP14.73□□□□□ -0.05
PRKAA1-201ENST00000296800 IFNLR1Q8IU57 520 aaPredicted RBP14.73□□□□□ -0.05
PRKAA1-201ENST00000296800 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
PRKAA1-201ENST00000296800 MKRN3Q13064 507 aaKnown RBP14.72□□□□□ -0.05
PRKAA1-201ENST00000296800 C3orf67Q6ZVT6 689 aa14.71□□□□□ -0.05
PRKAA1-201ENST00000296800 CHRM1P11229 460 aaPredicted RBP14.69□□□□□ -0.06
PRKAA1-201ENST00000296800 SPOCK2Q92563 424 aa14.68□□□□□ -0.06
PRKAA1-201ENST00000296800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.67□□□□□ -0.061e-10■■■■■ 30.2
PRKAA1-201ENST00000296800 PSEN1P49768 467 aa14.66□□□□□ -0.06
PRKAA1-201ENST00000296800 L3MBTL3Q96JM7 780 aaPredicted RBP14.66□□□□□ -0.06
PRKAA1-201ENST00000296800 EMP3P54852 163 aa14.62□□□□□ -0.07
PRKAA1-201ENST00000296800 CIZ1Q9ULV3 898 aaPredicted RBP14.6□□□□□ -0.07
PRKAA1-201ENST00000296800 POTEB3A0JP26 581 aa14.58□□□□□ -0.08
PRKAA1-201ENST00000296800 POTEBQ6S5H4 581 aa14.58□□□□□ -0.08
PRKAA1-201ENST00000296800 DPY19L2Q6NUT2 758 aa14.57□□□□□ -0.08
PRKAA1-201ENST00000296800 HS3ST6Q96QI5 342 aa14.55□□□□□ -0.08
PRKAA1-201ENST00000296800 FAM205CA6NFA0 338 aa14.54□□□□□ -0.08
PRKAA1-201ENST00000296800 PDAP1Q13442 181 aaKnown RBP14.54□□□□□ -0.08
PRKAA1-201ENST00000296800 ILDR1Q86SU0 546 aaPredicted RBP14.54□□□□□ -0.08
PRKAA1-201ENST00000296800 KRTAP3-3Q9BYR6 98 aa14.52□□□□□ -0.09
PRKAA1-201ENST00000296800 KRTAP3-2Q9BYR7 98 aa14.52□□□□□ -0.09
PRKAA1-201ENST00000296800 CABP2Q9NPB3 220 aa14.5□□□□□ -0.09
PRKAA1-201ENST00000296800 BOLA1Q9Y3E2 137 aa14.45□□□□□ -0.1
PRKAA1-201ENST00000296800 HOXB3P14651 431 aaPredicted RBP14.42□□□□□ -0.1
PRKAA1-201ENST00000296800 G3V3G9 751 aa14.41□□□□□ -0.1
PRKAA1-201ENST00000296800 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
PRKAA1-201ENST00000296800 ZNF710Q8N1W2 664 aa14.33□□□□□ -0.12
PRKAA1-201ENST00000296800 HOXB1P14653 301 aaPredicted RBP14.32□□□□□ -0.12
PRKAA1-201ENST00000296800 EFCAB3Q8N7B9 438 aa14.29□□□□□ -0.12
PRKAA1-201ENST00000296800 ERBB3P21860 1342 aa14.27□□□□□ -0.12
PRKAA1-201ENST00000296800 DOK7Q18PE1 504 aa14.27□□□□□ -0.13
PRKAA1-201ENST00000296800 RIOK3O14730 519 aaKnown RBP14.21□□□□□ -0.13
PRKAA1-201ENST00000296800 TMEM92Q6UXU6 159 aa14.2□□□□□ -0.14
PRKAA1-201ENST00000296800 VARS2Q5ST30 1063 aaKnown RBP14.19□□□□□ -0.14
PRKAA1-201ENST00000296800 RNF25Q96BH1 459 aaPredicted RBP14.19□□□□□ -0.14
PRKAA1-201ENST00000296800 MICALL2Q8IY33 904 aa14.18□□□□□ -0.14
PRKAA1-201ENST00000296800 RIMBP2O15034 1052 aa14.17□□□□□ -0.14
PRKAA1-201ENST00000296800 VGFO15240 615 aaPredicted RBP14.14□□□□□ -0.15
PRKAA1-201ENST00000296800 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.13□□□□□ -0.15
PRKAA1-201ENST00000296800 RNF166Q96A37 237 aaPredicted RBP14.13□□□□□ -0.15
PRKAA1-201ENST00000296800 ZFP91Q96JP5 570 aaPredicted RBP14.13□□□□□ -0.15
PRKAA1-201ENST00000296800 MS4A4AQ96JQ5 239 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms