RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 HNRNPUQ00839 825 aaKnown RBP eCLIP19.76■□□□□ 0.75
TRAPPC8-201ENST00000283351 RRP7BPQ9NSQ0 103 aa19.76■□□□□ 0.75
TRAPPC8-201ENST00000283351 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
TRAPPC8-201ENST00000283351 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC8-201ENST00000283351 ANP32BQ92688 251 aaKnown RBP19.74■□□□□ 0.75
TRAPPC8-201ENST00000283351 DDX10Q13206 875 aaKnown RBP19.73■□□□□ 0.75
TRAPPC8-201ENST00000283351 GTF3C3Q9Y5Q9 886 aa19.69■□□□□ 0.74
TRAPPC8-201ENST00000283351 POGKQ9P215 609 aa19.67■□□□□ 0.74
TRAPPC8-201ENST00000283351 CFDP1Q9UEE9 299 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC8-201ENST00000283351 MRS2Q9HD23 443 aa19.59■□□□□ 0.73
TRAPPC8-201ENST00000283351 HIRIP3Q9BW71 556 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC8-201ENST00000283351 SOX12O15370 315 aa19.58■□□□□ 0.73
TRAPPC8-201ENST00000283351 LAS1LQ9Y4W2 734 aaKnown RBP19.56■□□□□ 0.72
TRAPPC8-201ENST00000283351 TAOK2Q9UL54 1235 aa19.56■□□□□ 0.72
TRAPPC8-201ENST00000283351 CFAP53Q96M91 514 aa19.56■□□□□ 0.72
TRAPPC8-201ENST00000283351 FKBP8Q14318 412 aa19.54■□□□□ 0.72
TRAPPC8-201ENST00000283351 CCDC136Q96JN2 1154 aa19.51■□□□□ 0.71
TRAPPC8-201ENST00000283351 SENP3-EIF4A1A0A087X0R7 540 aa19.5■□□□□ 0.71
TRAPPC8-201ENST00000283351 NEUROD2Q15784 382 aa19.49■□□□□ 0.71
TRAPPC8-201ENST00000283351 TNNT2P45379 298 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC8-201ENST00000283351 CCDC9Q9Y3X0 531 aaKnown RBP19.49■□□□□ 0.71
TRAPPC8-201ENST00000283351 GOLGA2Q08379 1002 aa19.48■□□□□ 0.71
TRAPPC8-201ENST00000283351 KNSTRNQ9Y448 316 aa19.46■□□□□ 0.71
TRAPPC8-201ENST00000283351 HDGFP51858 240 aaKnown RBP19.44■□□□□ 0.7
TRAPPC8-201ENST00000283351 EIF4G2P78344 907 aaKnown RBP eCLIP19.44■□□□□ 0.7
TRAPPC8-201ENST00000283351 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC8-201ENST00000283351 NCBP3Q53F19 620 aaKnown RBP19.43■□□□□ 0.7
TRAPPC8-201ENST00000283351 MAPK8IP3Q9UPT6 1336 aa19.43■□□□□ 0.7
TRAPPC8-201ENST00000283351 CDCA8Q53HL2 280 aa19.42■□□□□ 0.7
TRAPPC8-201ENST00000283351 RSF1Q96T23 1441 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC8-201ENST00000283351 SAFB2Q14151 953 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRAPPC8-201ENST00000283351 GGT6Q6P531 493 aa19.41■□□□□ 0.7
TRAPPC8-201ENST00000283351 TPRNQ4KMQ1 711 aa19.4■□□□□ 0.7
TRAPPC8-201ENST00000283351 ISY1Q9ULR0 285 aaKnown RBP19.39■□□□□ 0.69
TRAPPC8-201ENST00000283351 OS9Q13438 667 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC8-201ENST00000283351 CARD11Q9BXL7 1154 aa19.37■□□□□ 0.69
TRAPPC8-201ENST00000283351 NUDCQ9Y266 331 aa19.37■□□□□ 0.69
TRAPPC8-201ENST00000283351 U2SURPO15042 1029 aaKnown RBP19.37■□□□□ 0.69
TRAPPC8-201ENST00000283351 PAK3O75914 559 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC8-201ENST00000283351 CSB-PGBD3P0DP91 1061 aa19.36■□□□□ 0.69
TRAPPC8-201ENST00000283351 ZNF330Q9Y3S2 320 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC8-201ENST00000283351 IRX6P78412 446 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC8-201ENST00000283351 FTSJ3Q8IY81 847 aaKnown RBP19.34■□□□□ 0.69
TRAPPC8-201ENST00000283351 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.69
TRAPPC8-201ENST00000283351 CLIP1P30622 1438 aa19.33■□□□□ 0.69
TRAPPC8-201ENST00000283351 SRPK2P78362 688 aaKnown RBP19.33■□□□□ 0.68
TRAPPC8-201ENST00000283351 ZRSR1Q15695 479 aaKnown RBP19.32■□□□□ 0.68
TRAPPC8-201ENST00000283351 STK26Q9P289 416 aa19.31■□□□□ 0.68
TRAPPC8-201ENST00000283351 RB1CC1Q8TDY2 1594 aa19.31■□□□□ 0.68
TRAPPC8-201ENST00000283351 NCLP19338 710 aaKnown RBP19.31■□□□□ 0.68
TRAPPC8-201ENST00000283351 CLSTN1O94985 981 aa19.29■□□□□ 0.68
TRAPPC8-201ENST00000283351 NAP1L2Q9ULW6 460 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC8-201ENST00000283351 KANK1Q14678 1352 aa19.28■□□□□ 0.68
TRAPPC8-201ENST00000283351 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.68
TRAPPC8-201ENST00000283351 FGD1P98174 961 aa19.27■□□□□ 0.67
TRAPPC8-201ENST00000283351 CASC1Q6TDU7 716 aa19.26■□□□□ 0.67
TRAPPC8-201ENST00000283351 TMX4Q9H1E5 349 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC8-201ENST00000283351 EIF5BO60841 1220 aaKnown RBP19.23■□□□□ 0.67
TRAPPC8-201ENST00000283351 KCNJ4P48050 445 aa19.21■□□□□ 0.67
TRAPPC8-201ENST00000283351 FRAT1Q92837 279 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC8-201ENST00000283351 CC2D1BQ5T0F9 858 aaKnown RBP19.2■□□□□ 0.66
TRAPPC8-201ENST00000283351 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
TRAPPC8-201ENST00000283351 CCNB3Q8WWL7 1395 aa19.2■□□□□ 0.66
TRAPPC8-201ENST00000283351 NBR1Q14596 966 aa19.17■□□□□ 0.66
TRAPPC8-201ENST00000283351 KIF27Q86VH2 1401 aa19.16■□□□□ 0.66
TRAPPC8-201ENST00000283351 RTF1Q92541 710 aaKnown RBP19.15■□□□□ 0.66
TRAPPC8-201ENST00000283351 ACIN1Q9UKV3 1341 aaKnown RBP19.15■□□□□ 0.66
TRAPPC8-201ENST00000283351 DCAF11Q8TEB1 546 aa19.15■□□□□ 0.66
TRAPPC8-201ENST00000283351 G3V3G9 751 aa19.11■□□□□ 0.65
TRAPPC8-201ENST00000283351 DCAF8Q5TAQ9 597 aa19.11■□□□□ 0.65
TRAPPC8-201ENST00000283351 PNNQ9H307 717 aaKnown RBP19.11■□□□□ 0.65
TRAPPC8-201ENST00000283351 GOLGA6L22H0YM25 854 aa19.1■□□□□ 0.65
TRAPPC8-201ENST00000283351 BECN1Q14457 450 aa19.09■□□□□ 0.65
TRAPPC8-201ENST00000283351 EID1Q9Y6B2 187 aa19.09■□□□□ 0.65
TRAPPC8-201ENST00000283351 WRNQ14191 1432 aaPredicted RBP eCLIP19.09■□□□□ 0.65
TRAPPC8-201ENST00000283351 MORC1Q86VD1 984 aa19.06■□□□□ 0.64
TRAPPC8-201ENST00000283351 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC8-201ENST00000283351 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC8-201ENST00000283351 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC8-201ENST00000283351 MSH5O43196 834 aa19.06■□□□□ 0.64
TRAPPC8-201ENST00000283351 TMF1P82094 1093 aa19.05■□□□□ 0.64
TRAPPC8-201ENST00000283351 NUTM2FA1L443 756 aa19.04■□□□□ 0.64
TRAPPC8-201ENST00000283351 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
TRAPPC8-201ENST00000283351 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC8-201ENST00000283351 MEX3CQ5U5Q3 659 aaKnown RBP19.02■□□□□ 0.63
TRAPPC8-201ENST00000283351 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
TRAPPC8-201ENST00000283351 GTF2E1P29083 439 aaPredicted RBP19■□□□□ 0.63
TRAPPC8-201ENST00000283351 NGDNQ8NEJ9 315 aaKnown RBP19■□□□□ 0.63
TRAPPC8-201ENST00000283351 PTMAP06454 111 aaKnown RBP19■□□□□ 0.63
TRAPPC8-201ENST00000283351 PLCB2Q00722 1185 aa18.99■□□□□ 0.63
TRAPPC8-201ENST00000283351 CHMP4BQ9H444 224 aaKnown RBP18.99■□□□□ 0.63
TRAPPC8-201ENST00000283351 RGS3P49796 1198 aa18.99■□□□□ 0.63
TRAPPC8-201ENST00000283351 CHMP3Q9Y3E7 222 aa18.98■□□□□ 0.63
TRAPPC8-201ENST00000283351 APBB1O00213 710 aa18.98■□□□□ 0.63
TRAPPC8-201ENST00000283351 EFCAB2Q5VUJ9 269 aa18.98■□□□□ 0.63
TRAPPC8-201ENST00000283351 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
TRAPPC8-201ENST00000283351 KIF3BO15066 747 aa18.96■□□□□ 0.63
TRAPPC8-201ENST00000283351 LTV1Q96GA3 475 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC8-201ENST00000283351 KLHL34Q8N239 644 aa18.96■□□□□ 0.63
TRAPPC8-201ENST00000283351 CARMIL2Q6F5E8 1435 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms