RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 PRM3Q9NNZ6 103 aa17.36■□□□□ 0.37
SMARCA5-201ENST00000283131 ARID3CA6NKF2 412 aa17.36■□□□□ 0.37
SMARCA5-201ENST00000283131 HAP1P54257 671 aaPredicted RBP17.35■□□□□ 0.37
SMARCA5-201ENST00000283131 PLCB2Q00722 1185 aa17.34■□□□□ 0.37
SMARCA5-201ENST00000283131 NAP1L5Q96NT1 182 aaPredicted RBP17.34■□□□□ 0.37
SMARCA5-201ENST00000283131 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
SMARCA5-201ENST00000283131 TONSLQ96HA7 1378 aa17.33■□□□□ 0.36
SMARCA5-201ENST00000283131 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.36
SMARCA5-201ENST00000283131 TAOK2Q9UL54 1235 aa17.31■□□□□ 0.36
SMARCA5-201ENST00000283131 NPM1P06748 294 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMARCA5-201ENST00000283131 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
SMARCA5-201ENST00000283131 AMER1Q5JTC6 1135 aaPredicted RBP17.29■□□□□ 0.36
SMARCA5-201ENST00000283131 FGD1P98174 961 aa17.27■□□□□ 0.35
SMARCA5-201ENST00000283131 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
SMARCA5-201ENST00000283131 KIAA2012Q0VF49 1180 aa17.24■□□□□ 0.35
SMARCA5-201ENST00000283131 PNNQ9H307 717 aaKnown RBP17.23■□□□□ 0.35
SMARCA5-201ENST00000283131 NOC3LQ8WTT2 800 aaKnown RBP17.23■□□□□ 0.35
SMARCA5-201ENST00000283131 P3H3Q8IVL6 736 aa17.21■□□□□ 0.35
SMARCA5-201ENST00000283131 NAP1L2Q9ULW6 460 aaPredicted RBP17.2■□□□□ 0.34
SMARCA5-201ENST00000283131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.346e-7■■■□□ 14.6
SMARCA5-201ENST00000283131 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
SMARCA5-201ENST00000283131 KCNJ4P48050 445 aa17.16■□□□□ 0.34
SMARCA5-201ENST00000283131 DDX10Q13206 875 aaKnown RBP17.15■□□□□ 0.34
SMARCA5-201ENST00000283131 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
SMARCA5-201ENST00000283131 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
SMARCA5-201ENST00000283131 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
SMARCA5-201ENST00000283131 DRC7Q8IY82 874 aa17.12■□□□□ 0.33
SMARCA5-201ENST00000283131 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
SMARCA5-201ENST00000283131 OS9Q13438 667 aaPredicted RBP17.11■□□□□ 0.33
SMARCA5-201ENST00000283131 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
SMARCA5-201ENST00000283131 MSNP26038 577 aaKnown RBP17.08■□□□□ 0.33
SMARCA5-201ENST00000283131 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.32
SMARCA5-201ENST00000283131 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
SMARCA5-201ENST00000283131 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.32
SMARCA5-201ENST00000283131 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
SMARCA5-201ENST00000283131 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
SMARCA5-201ENST00000283131 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
SMARCA5-201ENST00000283131 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
SMARCA5-201ENST00000283131 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
SMARCA5-201ENST00000283131 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
SMARCA5-201ENST00000283131 EIF4G2P78344 907 aaKnown RBP eCLIP17■□□□□ 0.31
SMARCA5-201ENST00000283131 GOLGA6L1Q8N7Z2 621 aa17■□□□□ 0.31
SMARCA5-201ENST00000283131 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
SMARCA5-201ENST00000283131 RTN4Q9NQC3 1192 aaKnown RBP16.99■□□□□ 0.31
SMARCA5-201ENST00000283131 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
SMARCA5-201ENST00000283131 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
SMARCA5-201ENST00000283131 CALRP27797 417 aaKnown RBP16.95■□□□□ 0.3
SMARCA5-201ENST00000283131 TSPY4P0CV99 314 aa16.95■□□□□ 0.3
SMARCA5-201ENST00000283131 TSPY10P0CW01 314 aa16.95■□□□□ 0.3
SMARCA5-201ENST00000283131 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
SMARCA5-201ENST00000283131 MCCP23508 829 aa16.94■□□□□ 0.3
SMARCA5-201ENST00000283131 PDE4CQ08493 712 aa16.94■□□□□ 0.3
SMARCA5-201ENST00000283131 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
SMARCA5-201ENST00000283131 CEP89Q96ST8 783 aa16.93■□□□□ 0.3
SMARCA5-201ENST00000283131 HSCBQ8IWL3 235 aa16.9■□□□□ 0.3
SMARCA5-201ENST00000283131 MS4A1P11836 297 aa16.88■□□□□ 0.29
SMARCA5-201ENST00000283131 CHIC2Q9UKJ5 165 aa16.87■□□□□ 0.29
SMARCA5-201ENST00000283131 SETQ01105 290 aaPredicted RBP16.87■□□□□ 0.29
SMARCA5-201ENST00000283131 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
SMARCA5-201ENST00000283131 TMX4Q9H1E5 349 aaPredicted RBP16.86■□□□□ 0.29
SMARCA5-201ENST00000283131 TPM4P67936 248 aa16.86■□□□□ 0.29
SMARCA5-201ENST00000283131 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
SMARCA5-201ENST00000283131 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
SMARCA5-201ENST00000283131 CCDC34Q96HJ3 373 aa16.85■□□□□ 0.29
SMARCA5-201ENST00000283131 ARID4BQ4LE39 1312 aaPredicted RBP16.85■□□□□ 0.29
SMARCA5-201ENST00000283131 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMARCA5-201ENST00000283131 CFAP44Q96MT7 982 aa16.84■□□□□ 0.29
SMARCA5-201ENST00000283131 RGS3P49796 1198 aa16.83■□□□□ 0.29
SMARCA5-201ENST00000283131 HTATSF1O43719 755 aaKnown RBP16.82■□□□□ 0.28
SMARCA5-201ENST00000283131 NEUROD2Q15784 382 aa16.81■□□□□ 0.28
SMARCA5-201ENST00000283131 FRAT1Q92837 279 aaPredicted RBP16.8■□□□□ 0.28
SMARCA5-201ENST00000283131 FBXO3Q9UK99 471 aa16.8■□□□□ 0.28
SMARCA5-201ENST00000283131 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
SMARCA5-201ENST00000283131 ARID3AQ99856 593 aa16.77■□□□□ 0.27
SMARCA5-201ENST00000283131 PTMSP20962 102 aa16.76■□□□□ 0.27
SMARCA5-201ENST00000283131 NOP58Q9Y2X3 529 aaKnown RBP16.76■□□□□ 0.27
SMARCA5-201ENST00000283131 TPM3P06753 285 aa16.74■□□□□ 0.27
SMARCA5-201ENST00000283131 RASSF8Q8NHQ8 419 aa16.74■□□□□ 0.27
SMARCA5-201ENST00000283131 SYAP1Q96A49 352 aaPredicted RBP16.74■□□□□ 0.27
SMARCA5-201ENST00000283131 POGKQ9P215 609 aa16.71■□□□□ 0.27
SMARCA5-201ENST00000283131 CREBRFQ8IUR6 639 aa16.71■□□□□ 0.26
SMARCA5-201ENST00000283131 RRP12Q5JTH9 1297 aaKnown RBP16.7■□□□□ 0.26
SMARCA5-201ENST00000283131 G3V3G9 751 aa16.69■□□□□ 0.26
SMARCA5-201ENST00000283131 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
SMARCA5-201ENST00000283131 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
SMARCA5-201ENST00000283131 GBP4Q96PP9 640 aa16.69■□□□□ 0.26
SMARCA5-201ENST00000283131 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
SMARCA5-201ENST00000283131 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
SMARCA5-201ENST00000283131 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
SMARCA5-201ENST00000283131 PATL2C9JE40 543 aaKnown RBP16.68■□□□□ 0.26
SMARCA5-201ENST00000283131 SPRYD3Q8NCJ5 442 aa16.68■□□□□ 0.26
SMARCA5-201ENST00000283131 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
SMARCA5-201ENST00000283131 RGL3Q3MIN7 710 aa16.67■□□□□ 0.26
SMARCA5-201ENST00000283131 VPS53Q5VIR6 699 aa16.66■□□□□ 0.26
SMARCA5-201ENST00000283131 HIRIP3Q9BW71 556 aaPredicted RBP16.66■□□□□ 0.26
SMARCA5-201ENST00000283131 MARCH6O60337 910 aa16.64■□□□□ 0.25
SMARCA5-201ENST00000283131 WWC1Q8IX03 1113 aa16.64■□□□□ 0.25
SMARCA5-201ENST00000283131 SUPT16HQ9Y5B9 1047 aaKnown RBP16.64■□□□□ 0.25
SMARCA5-201ENST00000283131 TSR1Q2NL82 804 aaKnown RBP16.64■□□□□ 0.25
SMARCA5-201ENST00000283131 MTUS2Q5JR59 1369 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms