RNA–Protein interactions for RNA: ENST00000280704.8

LDHC-201, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 1,256 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-201ENST00000280704 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
LDHC-201ENST00000280704 POTEJP0CG39 1038 aa13.55□□□□□ -0.24
LDHC-201ENST00000280704 POTEMA6NI47 508 aa13.54□□□□□ -0.24
LDHC-201ENST00000280704 ATMINO43313 823 aaPredicted RBP13.53□□□□□ -0.24
LDHC-201ENST00000280704 METRNQ9UJH8 293 aa13.52□□□□□ -0.25
LDHC-201ENST00000280704 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
LDHC-201ENST00000280704 PROM2Q8N271 834 aa13.46□□□□□ -0.25
LDHC-201ENST00000280704 C7P10643 843 aa13.45□□□□□ -0.26
LDHC-201ENST00000280704 SLC39A7Q92504 469 aa13.45□□□□□ -0.26
LDHC-201ENST00000280704 TSPYL2Q9H2G4 693 aaPredicted RBP13.43□□□□□ -0.26
LDHC-201ENST00000280704 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
LDHC-201ENST00000280704 ATN1P54259 1190 aaPredicted RBP13.4□□□□□ -0.26
LDHC-201ENST00000280704 LCE2DQ5TA82 110 aaPredicted RBP13.38□□□□□ -0.27
LDHC-201ENST00000280704 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
LDHC-201ENST00000280704 TRPC6Q9Y210 931 aa13.36□□□□□ -0.27
LDHC-201ENST00000280704 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
LDHC-201ENST00000280704 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
LDHC-201ENST00000280704 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
LDHC-201ENST00000280704 MAP3K13O43283 966 aa13.27□□□□□ -0.29
LDHC-201ENST00000280704 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
LDHC-201ENST00000280704 PCDH10Q9P2E7 1040 aa13.25□□□□□ -0.29
LDHC-201ENST00000280704 SCUBE2Q9NQ36 999 aa13.24□□□□□ -0.29
LDHC-201ENST00000280704 FAM163AQ96GL9 167 aaPredicted RBP13.23□□□□□ -0.29
LDHC-201ENST00000280704 TIE1P35590 1138 aa13.21□□□□□ -0.29
LDHC-201ENST00000280704 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
LDHC-201ENST00000280704 TTLL13PA6NNM8 815 aa13.17□□□□□ -0.3
LDHC-201ENST00000280704 MIER1Q8N108 512 aa13.17□□□□□ -0.3
LDHC-201ENST00000280704 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
LDHC-201ENST00000280704 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
LDHC-201ENST00000280704 SEC24BO95487 1268 aa13.06□□□□□ -0.32
LDHC-201ENST00000280704 PCDHB13Q9Y5F0 798 aa13.04□□□□□ -0.32
LDHC-201ENST00000280704 NUBP1P53384 320 aa13.03□□□□□ -0.32
LDHC-201ENST00000280704 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
LDHC-201ENST00000280704 IER5LQ5T953 404 aa13.02□□□□□ -0.33
LDHC-201ENST00000280704 IFNL1Q8IU54 200 aa13□□□□□ -0.33
LDHC-201ENST00000280704 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
LDHC-201ENST00000280704 CDAN1Q8IWY9 1227 aa12.96□□□□□ -0.33
LDHC-201ENST00000280704 SLAIN1Q8ND83 568 aa12.92□□□□□ -0.34
LDHC-201ENST00000280704 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
LDHC-201ENST00000280704 ST18O60284 1047 aa12.91□□□□□ -0.34
LDHC-201ENST00000280704 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
LDHC-201ENST00000280704 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
LDHC-201ENST00000280704 CCDC180Q9P1Z9 1646 aa12.87□□□□□ -0.35
LDHC-201ENST00000280704 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
LDHC-201ENST00000280704 PLCG2P16885 1265 aa12.84□□□□□ -0.35
LDHC-201ENST00000280704 PYGBP11216 843 aa12.76□□□□□ -0.37
LDHC-201ENST00000280704 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
LDHC-201ENST00000280704 RB1CC1Q8TDY2 1594 aa12.75□□□□□ -0.37
LDHC-201ENST00000280704 PCDHB8Q9UN66 801 aa12.73□□□□□ -0.37
LDHC-201ENST00000280704 DCAF8Q5TAQ9 597 aa12.71□□□□□ -0.37
LDHC-201ENST00000280704 FKBP8Q14318 412 aa12.7□□□□□ -0.38
LDHC-201ENST00000280704 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
LDHC-201ENST00000280704 MMRN1Q13201 1228 aa12.67□□□□□ -0.38
LDHC-201ENST00000280704 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
LDHC-201ENST00000280704 MARVELD3Q96A59 401 aa12.67□□□□□ -0.38
LDHC-201ENST00000280704 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
LDHC-201ENST00000280704 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.38
LDHC-201ENST00000280704 SNPHO15079 494 aa12.62□□□□□ -0.39
LDHC-201ENST00000280704 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
LDHC-201ENST00000280704 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
LDHC-201ENST00000280704 POTEB3A0JP26 581 aa12.53□□□□□ -0.4
LDHC-201ENST00000280704 POTEBQ6S5H4 581 aa12.53□□□□□ -0.4
LDHC-201ENST00000280704 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
LDHC-201ENST00000280704 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
LDHC-201ENST00000280704 UNC13AQ9UPW8 1703 aa12.49□□□□□ -0.41
LDHC-201ENST00000280704 CC2D2AQ9P2K1 1620 aa12.49□□□□□ -0.41
LDHC-201ENST00000280704 KRTAP3-3Q9BYR6 98 aa12.49□□□□□ -0.41
LDHC-201ENST00000280704 KRTAP3-2Q9BYR7 98 aa12.49□□□□□ -0.41
LDHC-201ENST00000280704 EMP3P54852 163 aa12.48□□□□□ -0.41
LDHC-201ENST00000280704 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
LDHC-201ENST00000280704 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
LDHC-201ENST00000280704 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
LDHC-201ENST00000280704 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
LDHC-201ENST00000280704 GSE1Q14687 1217 aa12.46□□□□□ -0.41
LDHC-201ENST00000280704 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
LDHC-201ENST00000280704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.41
LDHC-201ENST00000280704 PSEN1P49768 467 aa12.45□□□□□ -0.42
LDHC-201ENST00000280704 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
LDHC-201ENST00000280704 HS3ST6Q96QI5 342 aa12.45□□□□□ -0.42
LDHC-201ENST00000280704 VASPP50552 380 aaPredicted RBP12.43□□□□□ -0.42
LDHC-201ENST00000280704 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
LDHC-201ENST00000280704 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
LDHC-201ENST00000280704 FAM205CA6NFA0 338 aa12.42□□□□□ -0.42
LDHC-201ENST00000280704 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
LDHC-201ENST00000280704 NACADO15069 1562 aa12.41□□□□□ -0.42
LDHC-201ENST00000280704 CUX2O14529 1486 aa12.38□□□□□ -0.43
LDHC-201ENST00000280704 HOXB3P14651 431 aaPredicted RBP12.36□□□□□ -0.43
LDHC-201ENST00000280704 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
LDHC-201ENST00000280704 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
LDHC-201ENST00000280704 BOLA1Q9Y3E2 137 aa12.3□□□□□ -0.44
LDHC-201ENST00000280704 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
LDHC-201ENST00000280704 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
LDHC-201ENST00000280704 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
LDHC-201ENST00000280704 EIF4G1Q04637 1599 aaKnown RBP12.2□□□□□ -0.46
LDHC-201ENST00000280704 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
LDHC-201ENST00000280704 G3V3G9 751 aa12.18□□□□□ -0.46
LDHC-201ENST00000280704 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
LDHC-201ENST00000280704 ZNF710Q8N1W2 664 aa12.17□□□□□ -0.46
LDHC-201ENST00000280704 ERBB3P21860 1342 aa12.16□□□□□ -0.46
LDHC-201ENST00000280704 DOK7Q18PE1 504 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms