RNA–Protein interactions for RNA: ENST00000280527.6

CRIM1-201, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIM1, Length 5,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-201ENST00000280527 CHIC2Q9UKJ5 165 aa29.82■■■□□ 2.36
CRIM1-201ENST00000280527 ERICH6BQ5W0A0 696 aa29.82■■■□□ 2.36
CRIM1-201ENST00000280527 A0A0G2JS52 829 aa29.81■■■□□ 2.36
CRIM1-201ENST00000280527 TPRNQ4KMQ1 711 aa29.81■■■□□ 2.36
CRIM1-201ENST00000280527 CDK11BP21127 795 aaKnown RBP29.8■■■□□ 2.36
CRIM1-201ENST00000280527 GOLGA6L22H0YM25 854 aa29.79■■■□□ 2.36
CRIM1-201ENST00000280527 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
CRIM1-201ENST00000280527 SENP3Q9H4L4 574 aaPredicted RBP29.78■■■□□ 2.36
CRIM1-201ENST00000280527 MYH16Q9H6N6 1097 aa29.77■■■□□ 2.36
CRIM1-201ENST00000280527 PLEKHG5O94827 1062 aa29.77■■■□□ 2.36
CRIM1-201ENST00000280527 KDM2AQ9Y2K7 1162 aa29.72■■■□□ 2.35
CRIM1-201ENST00000280527 NPM1P06748 294 aaKnown RBP eCLIP29.72■■■□□ 2.35
CRIM1-201ENST00000280527 PPM1GO15355 546 aaPredicted RBP29.7■■■□□ 2.35
CRIM1-201ENST00000280527 SUPT16HQ9Y5B9 1047 aaKnown RBP29.7■■■□□ 2.34
CRIM1-201ENST00000280527 ZBTB7CA1YPR0 619 aa29.66■■■□□ 2.34
CRIM1-201ENST00000280527 NOP58Q9Y2X3 529 aaKnown RBP29.64■■■□□ 2.34
CRIM1-201ENST00000280527 AMER1Q5JTC6 1135 aaPredicted RBP29.61■■■□□ 2.33
CRIM1-201ENST00000280527 PLCB2Q00722 1185 aa29.53■■■□□ 2.32
CRIM1-201ENST00000280527 DEKP35659 375 aaKnown RBP29.52■■■□□ 2.32
CRIM1-201ENST00000280527 C14orf37Q86TY3 774 aa29.5■■■□□ 2.31
CRIM1-201ENST00000280527 ZRSR1Q15695 479 aaKnown RBP29.49■■■□□ 2.31
CRIM1-201ENST00000280527 EIF4G2P78344 907 aaKnown RBP eCLIP29.48■■■□□ 2.31
CRIM1-201ENST00000280527 ARID4BQ4LE39 1312 aaPredicted RBP29.47■■■□□ 2.31
CRIM1-201ENST00000280527 RGS3P49796 1198 aa29.45■■■□□ 2.3
CRIM1-201ENST00000280527 PPP4R2Q9NY27 417 aa29.41■■■□□ 2.3
CRIM1-201ENST00000280527 TSPY4P0CV99 314 aa29.4■■■□□ 2.3
CRIM1-201ENST00000280527 TSPY10P0CW01 314 aa29.4■■■□□ 2.3
CRIM1-201ENST00000280527 B4GALNT3Q6L9W6 998 aa29.35■■■□□ 2.29
CRIM1-201ENST00000280527 CASC1Q6TDU7 716 aa29.32■■■□□ 2.28
CRIM1-201ENST00000280527 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.31■■■□□ 2.28
CRIM1-201ENST00000280527 FTSJ3Q8IY81 847 aaKnown RBP29.29■■■□□ 2.28
CRIM1-201ENST00000280527 HSP90AB1P08238 724 aaKnown RBP29.28■■■□□ 2.28
CRIM1-201ENST00000280527 TULP1O00294 542 aaPredicted RBP29.28■■■□□ 2.28
CRIM1-201ENST00000280527 TAOK2Q9UL54 1235 aa29.27■■■□□ 2.28
CRIM1-201ENST00000280527 PPP1R15AO75807 674 aaPredicted RBP29.27■■■□□ 2.28
CRIM1-201ENST00000280527 RRP7BPQ9NSQ0 103 aa29.24■■■□□ 2.27
CRIM1-201ENST00000280527 ARID3AQ99856 593 aa29.22■■■□□ 2.27
CRIM1-201ENST00000280527 MTUS2Q5JR59 1369 aa29.22■■■□□ 2.27
CRIM1-201ENST00000280527 MSNP26038 577 aaKnown RBP29.21■■■□□ 2.27
CRIM1-201ENST00000280527 NEUROD2Q15784 382 aa29.21■■■□□ 2.27
CRIM1-201ENST00000280527 SPRYD3Q8NCJ5 442 aa29.2■■■□□ 2.27
CRIM1-201ENST00000280527 RBM19Q9Y4C8 960 aaKnown RBP29.2■■■□□ 2.26
CRIM1-201ENST00000280527 KCNH8Q96L42 1107 aa29.19■■■□□ 2.26
CRIM1-201ENST00000280527 RGL3Q3MIN7 710 aa29.17■■■□□ 2.26
CRIM1-201ENST00000280527 FRAT1Q92837 279 aaPredicted RBP29.17■■■□□ 2.26
CRIM1-201ENST00000280527 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
CRIM1-201ENST00000280527 L1TD1Q5T7N2 865 aaKnown RBP29.15■■■□□ 2.26
CRIM1-201ENST00000280527 CHMP7Q8WUX9 453 aaPredicted RBP29.15■■■□□ 2.26
CRIM1-201ENST00000280527 CHAF1AQ13111 956 aaPredicted RBP29.14■■■□□ 2.26
CRIM1-201ENST00000280527 GOLGA6L6A8MZA4 724 aa29.14■■■□□ 2.26
CRIM1-201ENST00000280527 HAP1P54257 671 aaPredicted RBP29.14■■■□□ 2.26
CRIM1-201ENST00000280527 CFAP53Q96M91 514 aa29.06■■■□□ 2.24
CRIM1-201ENST00000280527 HSCBQ8IWL3 235 aa29.05■■■□□ 2.24
CRIM1-201ENST00000280527 KNSTRNQ9Y448 316 aa29.05■■■□□ 2.24
CRIM1-201ENST00000280527 NRDCO43847 1150 aa29■■■□□ 2.23
CRIM1-201ENST00000280527 DRC7Q8IY82 874 aa28.99■■■□□ 2.23
CRIM1-201ENST00000280527 NAP1L2Q9ULW6 460 aaPredicted RBP28.97■■■□□ 2.23
CRIM1-201ENST00000280527 GZF1Q9H116 711 aaPredicted RBP28.96■■■□□ 2.23
CRIM1-201ENST00000280527 FGD1P98174 961 aa28.95■■■□□ 2.22
CRIM1-201ENST00000280527 GOLGA6L4A6NEF3 574 aa28.95■■■□□ 2.22
CRIM1-201ENST00000280527 CLIP1P30622 1438 aa28.94■■■□□ 2.22
CRIM1-201ENST00000280527 LMOD2Q6P5Q4 547 aa28.93■■■□□ 2.22
CRIM1-201ENST00000280527 CARD11Q9BXL7 1154 aa28.92■■■□□ 2.22
CRIM1-201ENST00000280527 MYO15BQ96JP2 1530 aa28.91■■■□□ 2.22
CRIM1-201ENST00000280527 MAPK8IP3Q9UPT6 1336 aa28.91■■■□□ 2.22
CRIM1-201ENST00000280527 CC2D1BQ5T0F9 858 aaKnown RBP28.91■■■□□ 2.22
CRIM1-201ENST00000280527 PNNQ9H307 717 aaKnown RBP28.9■■■□□ 2.22
CRIM1-201ENST00000280527 KCNJ4P48050 445 aa28.89■■■□□ 2.22
CRIM1-201ENST00000280527 SIN3AQ96ST3 1273 aa28.89■■■□□ 2.22
CRIM1-201ENST00000280527 OS9Q13438 667 aaPredicted RBP28.85■■■□□ 2.21
CRIM1-201ENST00000280527 PLEKHD1A6NEE1 506 aa28.83■■■□□ 2.21
CRIM1-201ENST00000280527 NPHP1O15259 732 aa28.83■■■□□ 2.21
CRIM1-201ENST00000280527 CCDC180Q9P1Z9 1646 aa28.82■■■□□ 2.2
CRIM1-201ENST00000280527 SLKQ9H2G2 1235 aaPredicted RBP28.81■■■□□ 2.2
CRIM1-201ENST00000280527 CDCA8Q53HL2 280 aa28.79■■■□□ 2.2
CRIM1-201ENST00000280527 TNNT3P45378 269 aaPredicted RBP28.79■■■□□ 2.2
CRIM1-201ENST00000280527 TSHZ2Q9NRE2 1034 aa28.77■■■□□ 2.2
CRIM1-201ENST00000280527 KIAA2012Q0VF49 1180 aa28.74■■■□□ 2.19
CRIM1-201ENST00000280527 NUDCQ9Y266 331 aa28.73■■■□□ 2.19
CRIM1-201ENST00000280527 U2SURPO15042 1029 aaKnown RBP28.72■■■□□ 2.19
CRIM1-201ENST00000280527 POGKQ9P215 609 aa28.72■■■□□ 2.19
CRIM1-201ENST00000280527 MS4A1P11836 297 aa28.72■■■□□ 2.19
CRIM1-201ENST00000280527 CHMP4BQ9H444 224 aaKnown RBP28.71■■■□□ 2.19
CRIM1-201ENST00000280527 CEP162Q5TB80 1403 aa28.71■■■□□ 2.19
CRIM1-201ENST00000280527 CFDP1Q9UEE9 299 aaPredicted RBP28.68■■■□□ 2.18
CRIM1-201ENST00000280527 GBP4Q96PP9 640 aa28.68■■■□□ 2.18
CRIM1-201ENST00000280527 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
CRIM1-201ENST00000280527 MCCP23508 829 aa28.67■■■□□ 2.18
CRIM1-201ENST00000280527 GOLGA6L3A6NEY3 463 aa28.66■■■□□ 2.18
CRIM1-201ENST00000280527 RSF1Q96T23 1441 aaPredicted RBP28.63■■■□□ 2.17
CRIM1-201ENST00000280527 APBB1O00213 710 aa28.61■■■□□ 2.17
CRIM1-201ENST00000280527 SOX12O15370 315 aa28.61■■■□□ 2.17
CRIM1-201ENST00000280527 NCBP3Q53F19 620 aaKnown RBP28.6■■■□□ 2.17
CRIM1-201ENST00000280527 IPO9Q96P70 1041 aaKnown RBP28.57■■■□□ 2.16
CRIM1-201ENST00000280527 HSP90AA2PQ14568 343 aaPredicted RBP28.56■■■□□ 2.16
CRIM1-201ENST00000280527 GOLGA2Q08379 1002 aa28.56■■■□□ 2.16
CRIM1-201ENST00000280527 CLSTN1O94985 981 aa28.56■■■□□ 2.16
CRIM1-201ENST00000280527 CCER2I3L3R5 266 aa28.56■■■□□ 2.16
CRIM1-201ENST00000280527 PTMSP20962 102 aa28.54■■■□□ 2.16
CRIM1-201ENST00000280527 VSIG10Q8N0Z9 540 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms