RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 TONSLQ96HA7 1378 aa27.22■■□□□ 1.95
CACNA1B-201ENST00000277549 TMC1Q8TDI8 760 aa27.21■■□□□ 1.95
CACNA1B-201ENST00000277549 HIRIP3Q9BW71 556 aaPredicted RBP27.21■■□□□ 1.95
CACNA1B-201ENST00000277549 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.17■■□□□ 1.94
CACNA1B-201ENST00000277549 TRHP20396 242 aaPredicted RBP27.12■■□□□ 1.93
CACNA1B-201ENST00000277549 CCDC136Q96JN2 1154 aa27.11■■□□□ 1.93
CACNA1B-201ENST00000277549 LAS1LQ9Y4W2 734 aaKnown RBP27.1■■□□□ 1.93
CACNA1B-201ENST00000277549 CLSTN1O94985 981 aa27.1■■□□□ 1.93
CACNA1B-201ENST00000277549 NCLP19338 710 aaKnown RBP27.09■■□□□ 1.93
CACNA1B-201ENST00000277549 AMER1Q5JTC6 1135 aaPredicted RBP27.02■■□□□ 1.92
CACNA1B-201ENST00000277549 RGL3Q3MIN7 710 aa26.98■■□□□ 1.91
CACNA1B-201ENST00000277549 CHMP7Q8WUX9 453 aaPredicted RBP26.96■■□□□ 1.91
CACNA1B-201ENST00000277549 NAP1L2Q9ULW6 460 aaPredicted RBP26.94■■□□□ 1.9
CACNA1B-201ENST00000277549 MRS2Q9HD23 443 aa26.93■■□□□ 1.9
CACNA1B-201ENST00000277549 ISY1Q9ULR0 285 aaKnown RBP26.93■■□□□ 1.9
CACNA1B-201ENST00000277549 SOX12O15370 315 aa26.91■■□□□ 1.9
CACNA1B-201ENST00000277549 TSPY4P0CV99 314 aa26.91■■□□□ 1.9
CACNA1B-201ENST00000277549 TSPY10P0CW01 314 aa26.91■■□□□ 1.9
CACNA1B-201ENST00000277549 NEUROD2Q15784 382 aa26.91■■□□□ 1.9
CACNA1B-201ENST00000277549 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.9■■□□□ 1.9
CACNA1B-201ENST00000277549 ZRSR1Q15695 479 aaKnown RBP26.89■■□□□ 1.89
CACNA1B-201ENST00000277549 TNNT2P45379 298 aaPredicted RBP26.88■■□□□ 1.89
CACNA1B-201ENST00000277549 CSRNP3Q8WYN3 585 aa26.88■■□□□ 1.89
CACNA1B-201ENST00000277549 RRP7BPQ9NSQ0 103 aa26.85■■□□□ 1.89
CACNA1B-201ENST00000277549 ACIN1Q9UKV3 1341 aaKnown RBP26.84■■□□□ 1.89
CACNA1B-201ENST00000277549 GOLGA2Q08379 1002 aa26.81■■□□□ 1.88
CACNA1B-201ENST00000277549 PLCB2Q00722 1185 aa26.8■■□□□ 1.88
CACNA1B-201ENST00000277549 MLECQ14165 292 aa26.79■■□□□ 1.88
CACNA1B-201ENST00000277549 PTMAP06454 111 aaKnown RBP26.77■■□□□ 1.88
CACNA1B-201ENST00000277549 OS9Q13438 667 aaPredicted RBP26.76■■□□□ 1.87
CACNA1B-201ENST00000277549 GLIPR1L2Q4G1C9 344 aa26.73■■□□□ 1.87
CACNA1B-201ENST00000277549 DNTTIP2Q5QJE6 756 aaKnown RBP26.71■■□□□ 1.87
CACNA1B-201ENST00000277549 TRIM44Q96DX7 344 aaPredicted RBP26.69■■□□□ 1.86
CACNA1B-201ENST00000277549 FTSJ3Q8IY81 847 aaKnown RBP26.68■■□□□ 1.86
CACNA1B-201ENST00000277549 FGD1P98174 961 aa26.66■■□□□ 1.86
CACNA1B-201ENST00000277549 CASC1Q6TDU7 716 aa26.65■■□□□ 1.86
CACNA1B-201ENST00000277549 POGKQ9P215 609 aa26.64■■□□□ 1.86
CACNA1B-201ENST00000277549 PRM3Q9NNZ6 103 aa26.64■■□□□ 1.86
CACNA1B-201ENST00000277549 ZNF330Q9Y3S2 320 aaPredicted RBP26.62■■□□□ 1.85
CACNA1B-201ENST00000277549 ANO8Q9HCE9 1232 aaPredicted RBP26.62■■□□□ 1.85
CACNA1B-201ENST00000277549 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.85
CACNA1B-201ENST00000277549 FRAT1Q92837 279 aaPredicted RBP26.58■■□□□ 1.85
CACNA1B-201ENST00000277549 PDE4CQ08493 712 aa26.56■■□□□ 1.84
CACNA1B-201ENST00000277549 KCNJ4P48050 445 aa26.56■■□□□ 1.84
CACNA1B-201ENST00000277549 CFAP53Q96M91 514 aa26.56■■□□□ 1.84
CACNA1B-201ENST00000277549 BECN1Q14457 450 aa26.55■■□□□ 1.84
CACNA1B-201ENST00000277549 SAFB2Q14151 953 aaKnown RBP eCLIP26.54■■□□□ 1.84
CACNA1B-201ENST00000277549 CCDC9Q9Y3X0 531 aaKnown RBP26.54■■□□□ 1.84
CACNA1B-201ENST00000277549 GOLGA6L22H0YM25 854 aa26.54■■□□□ 1.84
CACNA1B-201ENST00000277549 U2SURPO15042 1029 aaKnown RBP26.54■■□□□ 1.84
CACNA1B-201ENST00000277549 MAPK8IP3Q9UPT6 1336 aa26.53■■□□□ 1.84
CACNA1B-201ENST00000277549 CC2D1BQ5T0F9 858 aaKnown RBP26.49■■□□□ 1.83
CACNA1B-201ENST00000277549 KNSTRNQ9Y448 316 aa26.48■■□□□ 1.83
CACNA1B-201ENST00000277549 RGS3P49796 1198 aa26.45■■□□□ 1.83
CACNA1B-201ENST00000277549 SCRIBQ14160 1630 aa26.45■■□□□ 1.82
CACNA1B-201ENST00000277549 SPRYD3Q8NCJ5 442 aa26.44■■□□□ 1.82
CACNA1B-201ENST00000277549 ERICH6BQ5W0A0 696 aa26.43■■□□□ 1.82
CACNA1B-201ENST00000277549 RTN4Q9NQC3 1192 aaKnown RBP26.41■■□□□ 1.82
CACNA1B-201ENST00000277549 PAK3O75914 559 aaPredicted RBP26.41■■□□□ 1.82
CACNA1B-201ENST00000277549 PLEKHD1A6NEE1 506 aa26.4■■□□□ 1.82
CACNA1B-201ENST00000277549 APBB1O00213 710 aa26.4■■□□□ 1.82
CACNA1B-201ENST00000277549 EIF4G2P78344 907 aaKnown RBP eCLIP26.39■■□□□ 1.82
CACNA1B-201ENST00000277549 HSP90AB1P08238 724 aaKnown RBP26.34■■□□□ 1.81
CACNA1B-201ENST00000277549 DDRGK1Q96HY6 314 aa26.34■■□□□ 1.81
CACNA1B-201ENST00000277549 CARD11Q9BXL7 1154 aa26.32■■□□□ 1.8
CACNA1B-201ENST00000277549 CSB-PGBD3P0DP91 1061 aa26.32■■□□□ 1.8
CACNA1B-201ENST00000277549 STK26Q9P289 416 aa26.3■■□□□ 1.8
CACNA1B-201ENST00000277549 MIER1Q8N108 512 aa26.29■■□□□ 1.8
CACNA1B-201ENST00000277549 NAP1L5Q96NT1 182 aaPredicted RBP26.29■■□□□ 1.8
CACNA1B-201ENST00000277549 GNL2Q13823 731 aaKnown RBP26.28■■□□□ 1.8
CACNA1B-201ENST00000277549 NUDCQ9Y266 331 aa26.26■■□□□ 1.79
CACNA1B-201ENST00000277549 SRPK2P78362 688 aaKnown RBP26.25■■□□□ 1.79
CACNA1B-201ENST00000277549 GOLGA6L6A8MZA4 724 aa26.25■■□□□ 1.79
CACNA1B-201ENST00000277549 FBXO3Q9UK99 471 aa26.23■■□□□ 1.79
CACNA1B-201ENST00000277549 DRC7Q8IY82 874 aa26.22■■□□□ 1.79
CACNA1B-201ENST00000277549 GOLGA6L4A6NEF3 574 aa26.22■■□□□ 1.79
CACNA1B-201ENST00000277549 G3V3G9 751 aa26.21■■□□□ 1.79
CACNA1B-201ENST00000277549 DCAF8Q5TAQ9 597 aa26.21■■□□□ 1.79
CACNA1B-201ENST00000277549 CFDP1Q9UEE9 299 aaPredicted RBP26.21■■□□□ 1.79
CACNA1B-201ENST00000277549 TMX4Q9H1E5 349 aaPredicted RBP26.2■■□□□ 1.79
CACNA1B-201ENST00000277549 CHMP3Q9Y3E7 222 aa26.18■■□□□ 1.78
CACNA1B-201ENST00000277549 AEBP2Q6ZN18 517 aaPredicted RBP26.18■■□□□ 1.78
CACNA1B-201ENST00000277549 SUPT16HQ9Y5B9 1047 aaKnown RBP26.18■■□□□ 1.78
CACNA1B-201ENST00000277549 KLHL34Q8N239 644 aa26.14■■□□□ 1.77
CACNA1B-201ENST00000277549 ARID3AQ99856 593 aa26.13■■□□□ 1.77
CACNA1B-201ENST00000277549 WWC1Q8IX03 1113 aa26.11■■□□□ 1.77
CACNA1B-201ENST00000277549 RTF1Q92541 710 aaKnown RBP26.11■■□□□ 1.77
CACNA1B-201ENST00000277549 PHF23Q9BUL5 403 aaPredicted RBP26.1■■□□□ 1.77
CACNA1B-201ENST00000277549 NOC3LQ8WTT2 800 aaKnown RBP26.1■■□□□ 1.77
CACNA1B-201ENST00000277549 CDCA8Q53HL2 280 aa26.09■■□□□ 1.77
CACNA1B-201ENST00000277549 ERCC6Q03468 1493 aa26.09■■□□□ 1.77
CACNA1B-201ENST00000277549 VPS53Q5VIR6 699 aa26.08■■□□□ 1.77
CACNA1B-201ENST00000277549 CREBRFQ8IUR6 639 aa26.08■■□□□ 1.77
CACNA1B-201ENST00000277549 MSH5O43196 834 aa26.08■■□□□ 1.77
CACNA1B-201ENST00000277549 PNNQ9H307 717 aaKnown RBP26.07■■□□□ 1.76
CACNA1B-201ENST00000277549 GGT6Q6P531 493 aa26.06■■□□□ 1.76
CACNA1B-201ENST00000277549 HSP90B1P14625 803 aaKnown RBP26.05■■□□□ 1.76
CACNA1B-201ENST00000277549 KRI1Q8N9T8 703 aaKnown RBP26.04■■□□□ 1.76
CACNA1B-201ENST00000277549 NUTM2DQ5VT03 806 aaPredicted RBP26.02■■□□□ 1.76
CACNA1B-201ENST00000277549 ZCCHC6Q5VYS8 1495 aaKnown RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms