RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMG9-201ENST00000270066 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
SMG9-201ENST00000270066 PPP1R15AO75807 674 aaPredicted RBP17.83■□□□□ 0.45
SMG9-201ENST00000270066 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.82■□□□□ 0.44
SMG9-201ENST00000270066 CFDP1Q9UEE9 299 aaPredicted RBP17.81■□□□□ 0.44
SMG9-201ENST00000270066 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
SMG9-201ENST00000270066 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMG9-201ENST00000270066 NBR1Q14596 966 aa17.76■□□□□ 0.43
SMG9-201ENST00000270066 UPF2Q9HAU5 1272 aaKnown RBP17.76■□□□□ 0.43
SMG9-201ENST00000270066 MRS2Q9HD23 443 aa17.75■□□□□ 0.43
SMG9-201ENST00000270066 SALL2Q9Y467 1007 aaPredicted RBP17.74■□□□□ 0.43
SMG9-201ENST00000270066 ARID4BQ4LE39 1312 aaPredicted RBP17.73■□□□□ 0.43
SMG9-201ENST00000270066 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
SMG9-201ENST00000270066 HSP90AA1P07900 732 aaKnown RBP17.69■□□□□ 0.42
SMG9-201ENST00000270066 CDCA8Q53HL2 280 aa17.69■□□□□ 0.42
SMG9-201ENST00000270066 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
SMG9-201ENST00000270066 C14orf37Q86TY3 774 aa17.68■□□□□ 0.42
SMG9-201ENST00000270066 MIER1Q8N108 512 aa17.68■□□□□ 0.42
SMG9-201ENST00000270066 RGL3Q3MIN7 710 aa17.66■□□□□ 0.42
SMG9-201ENST00000270066 CUX2O14529 1486 aa17.65■□□□□ 0.42
SMG9-201ENST00000270066 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
SMG9-201ENST00000270066 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
SMG9-201ENST00000270066 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.42
SMG9-201ENST00000270066 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
SMG9-201ENST00000270066 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
SMG9-201ENST00000270066 CCDC136Q96JN2 1154 aa17.63■□□□□ 0.41
SMG9-201ENST00000270066 ZBTB7CA1YPR0 619 aa17.61■□□□□ 0.41
SMG9-201ENST00000270066 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
SMG9-201ENST00000270066 CFAP53Q96M91 514 aa17.61■□□□□ 0.41
SMG9-201ENST00000270066 ANP32EQ9BTT0 268 aa17.6■□□□□ 0.41
SMG9-201ENST00000270066 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
SMG9-201ENST00000270066 SENP3Q9H4L4 574 aaPredicted RBP17.59■□□□□ 0.41
SMG9-201ENST00000270066 HIRIP3Q9BW71 556 aaPredicted RBP17.58■□□□□ 0.41
SMG9-201ENST00000270066 ANP32BQ92688 251 aaKnown RBP17.58■□□□□ 0.4
SMG9-201ENST00000270066 A0A0G2JS52 829 aa17.56■□□□□ 0.4
SMG9-201ENST00000270066 CARD11Q9BXL7 1154 aa17.56■□□□□ 0.4
SMG9-201ENST00000270066 KNSTRNQ9Y448 316 aa17.56■□□□□ 0.4
SMG9-201ENST00000270066 IRX6P78412 446 aaPredicted RBP17.55■□□□□ 0.4
SMG9-201ENST00000270066 KANK1Q14678 1352 aa17.54■□□□□ 0.4
SMG9-201ENST00000270066 GLIPR1L2Q4G1C9 344 aa17.54■□□□□ 0.4
SMG9-201ENST00000270066 HAP1P54257 671 aaPredicted RBP17.54■□□□□ 0.4
SMG9-201ENST00000270066 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.4
SMG9-201ENST00000270066 CARMIL2Q6F5E8 1435 aa17.51■□□□□ 0.39
SMG9-201ENST00000270066 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
SMG9-201ENST00000270066 PLEKHG5O94827 1062 aa17.5■□□□□ 0.39
SMG9-201ENST00000270066 POGKQ9P215 609 aa17.5■□□□□ 0.39
SMG9-201ENST00000270066 ARXQ96QS3 562 aa17.49■□□□□ 0.39
SMG9-201ENST00000270066 SOGA1O94964 1423 aa17.47■□□□□ 0.39
SMG9-201ENST00000270066 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
SMG9-201ENST00000270066 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
SMG9-201ENST00000270066 ARHGAP35Q9NRY4 1499 aa17.42■□□□□ 0.38
SMG9-201ENST00000270066 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
SMG9-201ENST00000270066 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
SMG9-201ENST00000270066 MAPK8IP3Q9UPT6 1336 aa17.41■□□□□ 0.38
SMG9-201ENST00000270066 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
SMG9-201ENST00000270066 VPS8Q8N3P4 1428 aa17.37■□□□□ 0.37
SMG9-201ENST00000270066 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
SMG9-201ENST00000270066 FMN1Q68DA7 1419 aa17.37■□□□□ 0.37
SMG9-201ENST00000270066 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
SMG9-201ENST00000270066 TMF1P82094 1093 aa17.36■□□□□ 0.37
SMG9-201ENST00000270066 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
SMG9-201ENST00000270066 LMOD2Q6P5Q4 547 aa17.34■□□□□ 0.37
SMG9-201ENST00000270066 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
SMG9-201ENST00000270066 TDRD9Q8NDG6 1382 aaKnown RBP17.34■□□□□ 0.37
SMG9-201ENST00000270066 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
SMG9-201ENST00000270066 RTN4Q9NQC3 1192 aaKnown RBP17.33■□□□□ 0.36
SMG9-201ENST00000270066 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
SMG9-201ENST00000270066 MLECQ14165 292 aa17.32■□□□□ 0.36
SMG9-201ENST00000270066 SETD5Q9C0A6 1442 aa17.32■□□□□ 0.36
SMG9-201ENST00000270066 FTSJ3Q8IY81 847 aaKnown RBP17.31■□□□□ 0.36
SMG9-201ENST00000270066 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
SMG9-201ENST00000270066 BECN1Q14457 450 aa17.29■□□□□ 0.36
SMG9-201ENST00000270066 WIZO95785 1651 aa17.28■□□□□ 0.36
SMG9-201ENST00000270066 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
SMG9-201ENST00000270066 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
SMG9-201ENST00000270066 CHMP4BQ9H444 224 aaKnown RBP17.27■□□□□ 0.36
SMG9-201ENST00000270066 GGT6Q6P531 493 aa17.27■□□□□ 0.35
SMG9-201ENST00000270066 CASC1Q6TDU7 716 aa17.27■□□□□ 0.35
SMG9-201ENST00000270066 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
SMG9-201ENST00000270066 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
SMG9-201ENST00000270066 CC2D1BQ5T0F9 858 aaKnown RBP17.26■□□□□ 0.35
SMG9-201ENST00000270066 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
SMG9-201ENST00000270066 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
SMG9-201ENST00000270066 ANKRD30AQ9BXX3 1397 aa17.24■□□□□ 0.35
SMG9-201ENST00000270066 MS4A1P11836 297 aa17.24■□□□□ 0.35
SMG9-201ENST00000270066 TNNT2P45379 298 aaPredicted RBP17.24■□□□□ 0.35
SMG9-201ENST00000270066 U2SURPO15042 1029 aaKnown RBP17.23■□□□□ 0.35
SMG9-201ENST00000270066 PKD2Q13563 968 aa17.23■□□□□ 0.35
SMG9-201ENST00000270066 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
SMG9-201ENST00000270066 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
SMG9-201ENST00000270066 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
SMG9-201ENST00000270066 MORC1Q86VD1 984 aa17.18■□□□□ 0.34
SMG9-201ENST00000270066 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
SMG9-201ENST00000270066 HDGFL2Q7Z4V5 671 aaPredicted RBP17.17■□□□□ 0.34
SMG9-201ENST00000270066 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
SMG9-201ENST00000270066 CCDC18Q5T9S5 1454 aa17.17■□□□□ 0.34
SMG9-201ENST00000270066 NUP155O75694 1391 aa17.16■□□□□ 0.34
SMG9-201ENST00000270066 GOLGA6L22H0YM25 854 aa17.16■□□□□ 0.34
SMG9-201ENST00000270066 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
SMG9-201ENST00000270066 NPHP1O15259 732 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms