RNA–Protein interactions for RNA: ENST00000264414.8

CUL3-201, Transcript of cullin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL3, Length 6,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-201ENST00000264414 NPHP1O15259 732 aa19.73■□□□□ 0.75
CUL3-201ENST00000264414 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
CUL3-201ENST00000264414 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
CUL3-201ENST00000264414 PLCB2Q00722 1185 aa19.72■□□□□ 0.75
CUL3-201ENST00000264414 ZRSR1Q15695 479 aaKnown RBP19.71■□□□□ 0.75
CUL3-201ENST00000264414 RTN4Q9NQC3 1192 aaKnown RBP19.66■□□□□ 0.74
CUL3-201ENST00000264414 CHIC2Q9UKJ5 165 aa19.66■□□□□ 0.74
CUL3-201ENST00000264414 HIRIP3Q9BW71 556 aaPredicted RBP19.65■□□□□ 0.74
CUL3-201ENST00000264414 NAP1L2Q9ULW6 460 aaPredicted RBP19.62■□□□□ 0.73
CUL3-201ENST00000264414 PPM1GO15355 546 aaPredicted RBP19.61■□□□□ 0.73
CUL3-201ENST00000264414 TNNT2P45379 298 aaPredicted RBP19.6■□□□□ 0.73
CUL3-201ENST00000264414 NPM1P06748 294 aaKnown RBP eCLIP19.59■□□□□ 0.73
CUL3-201ENST00000264414 TONSLQ96HA7 1378 aa19.59■□□□□ 0.73
CUL3-201ENST00000264414 LAS1LQ9Y4W2 734 aaKnown RBP19.58■□□□□ 0.72
CUL3-201ENST00000264414 LMOD2Q6P5Q4 547 aa19.57■□□□□ 0.72
CUL3-201ENST00000264414 PRM3Q9NNZ6 103 aa19.57■□□□□ 0.72
CUL3-201ENST00000264414 NAP1L5Q96NT1 182 aaPredicted RBP19.54■□□□□ 0.72
CUL3-201ENST00000264414 ISY1Q9ULR0 285 aaKnown RBP19.53■□□□□ 0.72
CUL3-201ENST00000264414 MRS2Q9HD23 443 aa19.51■□□□□ 0.71
CUL3-201ENST00000264414 PPP1R15AO75807 674 aaPredicted RBP19.51■□□□□ 0.71
CUL3-201ENST00000264414 PDE4CQ08493 712 aa19.5■□□□□ 0.71
CUL3-201ENST00000264414 ANO8Q9HCE9 1232 aaPredicted RBP19.5■□□□□ 0.71
CUL3-201ENST00000264414 GOLGA6L22H0YM25 854 aa19.49■□□□□ 0.71
CUL3-201ENST00000264414 ARID4BQ4LE39 1312 aaPredicted RBP19.48■□□□□ 0.71
CUL3-201ENST00000264414 BECN1Q14457 450 aa19.46■□□□□ 0.71
CUL3-201ENST00000264414 ERICH6BQ5W0A0 696 aa19.45■□□□□ 0.7
CUL3-201ENST00000264414 NEUROD2Q15784 382 aa19.44■□□□□ 0.7
CUL3-201ENST00000264414 FGD1P98174 961 aa19.42■□□□□ 0.7
CUL3-201ENST00000264414 ARID3AQ99856 593 aa19.41■□□□□ 0.7
CUL3-201ENST00000264414 GOLGA2Q08379 1002 aa19.4■□□□□ 0.7
CUL3-201ENST00000264414 CASC1Q6TDU7 716 aa19.39■□□□□ 0.69
CUL3-201ENST00000264414 ABCC9O60706 1549 aa19.39■□□□□ 0.69
CUL3-201ENST00000264414 OS9Q13438 667 aaPredicted RBP19.38■□□□□ 0.69
CUL3-201ENST00000264414 FTSJ3Q8IY81 847 aaKnown RBP19.35■□□□□ 0.69
CUL3-201ENST00000264414 FBXO3Q9UK99 471 aa19.34■□□□□ 0.69
CUL3-201ENST00000264414 SPRYD3Q8NCJ5 442 aa19.34■□□□□ 0.69
CUL3-201ENST00000264414 KCNJ4P48050 445 aa19.33■□□□□ 0.68
CUL3-201ENST00000264414 DDRGK1Q96HY6 314 aa19.33■□□□□ 0.68
CUL3-201ENST00000264414 RGL3Q3MIN7 710 aa19.32■□□□□ 0.68
CUL3-201ENST00000264414 SOX12O15370 315 aa19.3■□□□□ 0.68
CUL3-201ENST00000264414 RGS3P49796 1198 aa19.29■□□□□ 0.68
CUL3-201ENST00000264414 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
CUL3-201ENST00000264414 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
CUL3-201ENST00000264414 GOLGA6L6A8MZA4 724 aa19.27■□□□□ 0.68
CUL3-201ENST00000264414 DRC7Q8IY82 874 aa19.27■□□□□ 0.68
CUL3-201ENST00000264414 HSP90AB1P08238 724 aaKnown RBP19.26■□□□□ 0.67
CUL3-201ENST00000264414 FRAT1Q92837 279 aaPredicted RBP19.26■□□□□ 0.67
CUL3-201ENST00000264414 NOC3LQ8WTT2 800 aaKnown RBP19.22■□□□□ 0.67
CUL3-201ENST00000264414 GOLGA6L4A6NEF3 574 aa19.18■□□□□ 0.66
CUL3-201ENST00000264414 PNNQ9H307 717 aaKnown RBP19.18■□□□□ 0.66
CUL3-201ENST00000264414 TSPY4P0CV99 314 aa19.17■□□□□ 0.66
CUL3-201ENST00000264414 TSPY10P0CW01 314 aa19.17■□□□□ 0.66
CUL3-201ENST00000264414 RRP7BPQ9NSQ0 103 aa19.16■□□□□ 0.66
CUL3-201ENST00000264414 ANP32EQ9BTT0 268 aa19.15■□□□□ 0.66
CUL3-201ENST00000264414 ZNF330Q9Y3S2 320 aaPredicted RBP19.15■□□□□ 0.66
CUL3-201ENST00000264414 GNL2Q13823 731 aaKnown RBP19.14■□□□□ 0.66
CUL3-201ENST00000264414 APBB1O00213 710 aa19.14■□□□□ 0.65
CUL3-201ENST00000264414 CFAP53Q96M91 514 aa19.13■□□□□ 0.65
CUL3-201ENST00000264414 MIER1Q8N108 512 aa19.12■□□□□ 0.65
CUL3-201ENST00000264414 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
CUL3-201ENST00000264414 WWC1Q8IX03 1113 aa19.11■□□□□ 0.65
CUL3-201ENST00000264414 MAPK8IP3Q9UPT6 1336 aa19.11■□□□□ 0.65
CUL3-201ENST00000264414 CSRNP3Q8WYN3 585 aa19.11■□□□□ 0.65
CUL3-201ENST00000264414 SUPT16HQ9Y5B9 1047 aaKnown RBP19.09■□□□□ 0.65
CUL3-201ENST00000264414 NRDCO43847 1150 aa19.09■□□□□ 0.65
CUL3-201ENST00000264414 CHAF1AQ13111 956 aaPredicted RBP19.08■□□□□ 0.65
CUL3-201ENST00000264414 CREBRFQ8IUR6 639 aa19.08■□□□□ 0.64
CUL3-201ENST00000264414 KIAA2012Q0VF49 1180 aa19.07■□□□□ 0.64
CUL3-201ENST00000264414 CC2D1BQ5T0F9 858 aaKnown RBP19.07■□□□□ 0.64
CUL3-201ENST00000264414 A0A0U1RQG5 324 aaPredicted RBP19.06■□□□□ 0.64
CUL3-201ENST00000264414 KNSTRNQ9Y448 316 aa19.05■□□□□ 0.64
CUL3-201ENST00000264414 POGKQ9P215 609 aa19.05■□□□□ 0.64
CUL3-201ENST00000264414 MSNP26038 577 aaKnown RBP19.04■□□□□ 0.64
CUL3-201ENST00000264414 EIF4G2P78344 907 aaKnown RBP eCLIP19■□□□□ 0.63
CUL3-201ENST00000264414 KRI1Q8N9T8 703 aaKnown RBP18.99■□□□□ 0.63
CUL3-201ENST00000264414 HSP90B1P14625 803 aaKnown RBP18.98■□□□□ 0.63
CUL3-201ENST00000264414 SAFB2Q14151 953 aaKnown RBP eCLIP18.97■□□□□ 0.632e-7■■■■□ 22.6
CUL3-201ENST00000264414 MLECQ14165 292 aa18.97■□□□□ 0.63
CUL3-201ENST00000264414 PATL2C9JE40 543 aaKnown RBP18.96■□□□□ 0.62
CUL3-201ENST00000264414 GZF1Q9H116 711 aaPredicted RBP18.96■□□□□ 0.62
CUL3-201ENST00000264414 HSCBQ8IWL3 235 aa18.95■□□□□ 0.62
CUL3-201ENST00000264414 CHMP7Q8WUX9 453 aaPredicted RBP18.95■□□□□ 0.62
CUL3-201ENST00000264414 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
CUL3-201ENST00000264414 CCDC9Q9Y3X0 531 aaKnown RBP18.94■□□□□ 0.62
CUL3-201ENST00000264414 DCAF1Q9Y4B6 1507 aa18.93■□□□□ 0.62
CUL3-201ENST00000264414 VPS53Q5VIR6 699 aa18.93■□□□□ 0.62
CUL3-201ENST00000264414 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
CUL3-201ENST00000264414 TNNT3P45378 269 aaPredicted RBP18.91■□□□□ 0.62
CUL3-201ENST00000264414 NUDCQ9Y266 331 aa18.91■□□□□ 0.62
CUL3-201ENST00000264414 B4GALNT3Q6L9W6 998 aa18.9■□□□□ 0.62
CUL3-201ENST00000264414 CHMP3Q9Y3E7 222 aa18.9■□□□□ 0.62
CUL3-201ENST00000264414 L1TD1Q5T7N2 865 aaKnown RBP18.89■□□□□ 0.61
CUL3-201ENST00000264414 NOP58Q9Y2X3 529 aaKnown RBP18.89■□□□□ 0.61
CUL3-201ENST00000264414 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.61
CUL3-201ENST00000264414 G3V3G9 751 aa18.88■□□□□ 0.61
CUL3-201ENST00000264414 DCAF8Q5TAQ9 597 aa18.88■□□□□ 0.61
CUL3-201ENST00000264414 PAK3O75914 559 aaPredicted RBP18.88■□□□□ 0.61
CUL3-201ENST00000264414 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
CUL3-201ENST00000264414 MCCP23508 829 aa18.86■□□□□ 0.61
CUL3-201ENST00000264414 NOL8Q76FK4 1167 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms