RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 DNTTIP2Q5QJE6 756 aaKnown RBP20■□□□□ 0.79
NID1-201ENST00000264187 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
NID1-201ENST00000264187 RTN4Q9NQC3 1192 aaKnown RBP19.99■□□□□ 0.79
NID1-201ENST00000264187 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
NID1-201ENST00000264187 TNNT2P45379 298 aaPredicted RBP19.96■□□□□ 0.79
NID1-201ENST00000264187 BECN1Q14457 450 aa19.96■□□□□ 0.79
NID1-201ENST00000264187 GOLGA6L22H0YM25 854 aa19.93■□□□□ 0.78
NID1-201ENST00000264187 ZRSR1Q15695 479 aaKnown RBP19.93■□□□□ 0.78
NID1-201ENST00000264187 MIER1Q8N108 512 aa19.9■□□□□ 0.78
NID1-201ENST00000264187 PLCB2Q00722 1185 aa19.89■□□□□ 0.78
NID1-201ENST00000264187 DDRGK1Q96HY6 314 aa19.89■□□□□ 0.77
NID1-201ENST00000264187 NAP1L5Q96NT1 182 aaPredicted RBP19.88■□□□□ 0.77
NID1-201ENST00000264187 NPM1P06748 294 aaKnown RBP eCLIP19.85■□□□□ 0.77
NID1-201ENST00000264187 AMER1Q5JTC6 1135 aaPredicted RBP19.84■□□□□ 0.77
NID1-201ENST00000264187 LAS1LQ9Y4W2 734 aaKnown RBP19.84■□□□□ 0.77
NID1-201ENST00000264187 ABCC9O60706 1549 aa19.82■□□□□ 0.76
NID1-201ENST00000264187 NCBP3Q53F19 620 aaKnown RBP19.81■□□□□ 0.76
NID1-201ENST00000264187 ANP32EQ9BTT0 268 aa19.79■□□□□ 0.76
NID1-201ENST00000264187 PPM1GO15355 546 aaPredicted RBP19.79■□□□□ 0.76
NID1-201ENST00000264187 NEUROD2Q15784 382 aa19.75■□□□□ 0.75
NID1-201ENST00000264187 TSPY4P0CV99 314 aa19.72■□□□□ 0.75
NID1-201ENST00000264187 TSPY10P0CW01 314 aa19.72■□□□□ 0.75
NID1-201ENST00000264187 CASC1Q6TDU7 716 aa19.72■□□□□ 0.75
NID1-201ENST00000264187 PPP1R15AO75807 674 aaPredicted RBP19.72■□□□□ 0.75
NID1-201ENST00000264187 RGS3P49796 1198 aa19.72■□□□□ 0.75
NID1-201ENST00000264187 HAP1P54257 671 aaPredicted RBP19.72■□□□□ 0.75
NID1-201ENST00000264187 ERICH6BQ5W0A0 696 aa19.71■□□□□ 0.75
NID1-201ENST00000264187 FTSJ3Q8IY81 847 aaKnown RBP19.71■□□□□ 0.75
NID1-201ENST00000264187 SUPT16HQ9Y5B9 1047 aaKnown RBP19.69■□□□□ 0.74
NID1-201ENST00000264187 RGL3Q3MIN7 710 aa19.69■□□□□ 0.74
NID1-201ENST00000264187 EIF4G2P78344 907 aaKnown RBP eCLIP19.68■□□□□ 0.74
NID1-201ENST00000264187 NAP1L2Q9ULW6 460 aaPredicted RBP19.68■□□□□ 0.74
NID1-201ENST00000264187 ARID4BQ4LE39 1312 aaPredicted RBP19.67■□□□□ 0.74
NID1-201ENST00000264187 RRP7BPQ9NSQ0 103 aa19.66■□□□□ 0.74
NID1-201ENST00000264187 FRAT1Q92837 279 aaPredicted RBP19.63■□□□□ 0.73
NID1-201ENST00000264187 FGD1P98174 961 aa19.63■□□□□ 0.73
NID1-201ENST00000264187 NPHP1O15259 732 aa19.61■□□□□ 0.73
NID1-201ENST00000264187 HSP90AB1P08238 724 aaKnown RBP19.6■□□□□ 0.73
NID1-201ENST00000264187 CFAP53Q96M91 514 aa19.59■□□□□ 0.73
NID1-201ENST00000264187 CLSTN1O94985 981 aa19.59■□□□□ 0.73
NID1-201ENST00000264187 LMOD2Q6P5Q4 547 aa19.59■□□□□ 0.73
NID1-201ENST00000264187 OS9Q13438 667 aaPredicted RBP19.57■□□□□ 0.72
NID1-201ENST00000264187 SPRYD3Q8NCJ5 442 aa19.57■□□□□ 0.72
NID1-201ENST00000264187 GOLGA6L6A8MZA4 724 aa19.56■□□□□ 0.72
NID1-201ENST00000264187 KCNJ4P48050 445 aa19.56■□□□□ 0.72
NID1-201ENST00000264187 KCNH8Q96L42 1107 aa19.55■□□□□ 0.72
NID1-201ENST00000264187 KNSTRNQ9Y448 316 aa19.55■□□□□ 0.72
NID1-201ENST00000264187 MTUS2Q5JR59 1369 aa19.53■□□□□ 0.72
NID1-201ENST00000264187 ARID3AQ99856 593 aa19.53■□□□□ 0.72
NID1-201ENST00000264187 NOP58Q9Y2X3 529 aaKnown RBP19.53■□□□□ 0.72
NID1-201ENST00000264187 MAPK8IP3Q9UPT6 1336 aa19.52■□□□□ 0.71
NID1-201ENST00000264187 GOLGA6L4A6NEF3 574 aa19.5■□□□□ 0.71
NID1-201ENST00000264187 NRDCO43847 1150 aa19.48■□□□□ 0.71
NID1-201ENST00000264187 DRC7Q8IY82 874 aa19.48■□□□□ 0.71
NID1-201ENST00000264187 B4GALNT3Q6L9W6 998 aa19.47■□□□□ 0.71
NID1-201ENST00000264187 CHAF1AQ13111 956 aaPredicted RBP19.46■□□□□ 0.71
NID1-201ENST00000264187 GOLGA2Q08379 1002 aa19.45■□□□□ 0.7
NID1-201ENST00000264187 ISY1Q9ULR0 285 aaKnown RBP19.45■□□□□ 0.7
NID1-201ENST00000264187 MSNP26038 577 aaKnown RBP19.44■□□□□ 0.7
NID1-201ENST00000264187 U2SURPO15042 1029 aaKnown RBP19.43■□□□□ 0.7
NID1-201ENST00000264187 CC2D1BQ5T0F9 858 aaKnown RBP19.43■□□□□ 0.7
NID1-201ENST00000264187 CARD11Q9BXL7 1154 aa19.42■□□□□ 0.7
NID1-201ENST00000264187 PPP4R2Q9NY27 417 aa19.41■□□□□ 0.7
NID1-201ENST00000264187 HSCBQ8IWL3 235 aa19.39■□□□□ 0.7
NID1-201ENST00000264187 SOX12O15370 315 aa19.39■□□□□ 0.69
NID1-201ENST00000264187 NUDCQ9Y266 331 aa19.38■□□□□ 0.69
NID1-201ENST00000264187 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
NID1-201ENST00000264187 DEKP35659 375 aaKnown RBP19.36■□□□□ 0.69
NID1-201ENST00000264187 POGKQ9P215 609 aa19.36■□□□□ 0.69
NID1-201ENST00000264187 APBB1O00213 710 aa19.35■□□□□ 0.69
NID1-201ENST00000264187 PNNQ9H307 717 aaKnown RBP19.35■□□□□ 0.69
NID1-201ENST00000264187 CDCA8Q53HL2 280 aa19.35■□□□□ 0.69
NID1-201ENST00000264187 PDE4CQ08493 712 aa19.33■□□□□ 0.68
NID1-201ENST00000264187 GZF1Q9H116 711 aaPredicted RBP19.31■□□□□ 0.68
NID1-201ENST00000264187 GNL2Q13823 731 aaKnown RBP19.3■□□□□ 0.68
NID1-201ENST00000264187 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
NID1-201ENST00000264187 DCAF1Q9Y4B6 1507 aa19.28■□□□□ 0.68
NID1-201ENST00000264187 L1TD1Q5T7N2 865 aaKnown RBP19.27■□□□□ 0.68
NID1-201ENST00000264187 NOC3LQ8WTT2 800 aaKnown RBP19.27■□□□□ 0.68
NID1-201ENST00000264187 PRM3Q9NNZ6 103 aa19.25■□□□□ 0.67
NID1-201ENST00000264187 MCCP23508 829 aa19.25■□□□□ 0.67
NID1-201ENST00000264187 SIN3AQ96ST3 1273 aa19.25■□□□□ 0.67
NID1-201ENST00000264187 CHMP4BQ9H444 224 aaKnown RBP19.25■□□□□ 0.67
NID1-201ENST00000264187 PLEKHD1A6NEE1 506 aa19.24■□□□□ 0.67
NID1-201ENST00000264187 MS4A1P11836 297 aa19.22■□□□□ 0.67
NID1-201ENST00000264187 KIAA2012Q0VF49 1180 aa19.2■□□□□ 0.66
NID1-201ENST00000264187 SLKQ9H2G2 1235 aaPredicted RBP19.2■□□□□ 0.66
NID1-201ENST00000264187 TNNT3P45378 269 aaPredicted RBP19.19■□□□□ 0.66
NID1-201ENST00000264187 SAFB2Q14151 953 aaKnown RBP eCLIP19.19■□□□□ 0.66
NID1-201ENST00000264187 CLIP1P30622 1438 aa19.19■□□□□ 0.66
NID1-201ENST00000264187 CFDP1Q9UEE9 299 aaPredicted RBP19.18■□□□□ 0.66
NID1-201ENST00000264187 ZNF330Q9Y3S2 320 aaPredicted RBP19.18■□□□□ 0.66
NID1-201ENST00000264187 ANO8Q9HCE9 1232 aaPredicted RBP19.17■□□□□ 0.66
NID1-201ENST00000264187 KIAA1211Q6ZU35 1233 aa19.14■□□□□ 0.65
NID1-201ENST00000264187 A0A0U1RQG5 324 aaPredicted RBP19.13■□□□□ 0.65
NID1-201ENST00000264187 RBM19Q9Y4C8 960 aaKnown RBP19.13■□□□□ 0.65
NID1-201ENST00000264187 CREBRFQ8IUR6 639 aa19.12■□□□□ 0.65
NID1-201ENST00000264187 HSP90B1P14625 803 aaKnown RBP19.12■□□□□ 0.65
NID1-201ENST00000264187 SRPK2P78362 688 aaKnown RBP19.12■□□□□ 0.65
NID1-201ENST00000264187 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms