RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 EEA1Q15075 1411 aa22.48■■□□□ 1.19
CROCCP3-201ENST00000263511 A0A0G2JS52 829 aa22.44■■□□□ 1.18
CROCCP3-201ENST00000263511 C14orf37Q86TY3 774 aa22.42■■□□□ 1.18
CROCCP3-201ENST00000263511 GOLGA3Q08378 1498 aa22.41■■□□□ 1.18
CROCCP3-201ENST00000263511 MYH16Q9H6N6 1097 aa22.41■■□□□ 1.18
CROCCP3-201ENST00000263511 ZBTB7CA1YPR0 619 aa22.4■■□□□ 1.18
CROCCP3-201ENST00000263511 CFDP1Q9UEE9 299 aaPredicted RBP22.39■■□□□ 1.17
CROCCP3-201ENST00000263511 BAZ1BQ9UIG0 1483 aaKnown RBP22.38■■□□□ 1.17
CROCCP3-201ENST00000263511 SENP3Q9H4L4 574 aaPredicted RBP22.38■■□□□ 1.17
CROCCP3-201ENST00000263511 ARID4BQ4LE39 1312 aaPredicted RBP22.37■■□□□ 1.17
CROCCP3-201ENST00000263511 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.17
CROCCP3-201ENST00000263511 RGL3Q3MIN7 710 aa22.36■■□□□ 1.17
CROCCP3-201ENST00000263511 HIRIP3Q9BW71 556 aaPredicted RBP22.35■■□□□ 1.17
CROCCP3-201ENST00000263511 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
CROCCP3-201ENST00000263511 PLEKHG5O94827 1062 aa22.34■■□□□ 1.17
CROCCP3-201ENST00000263511 CDCA8Q53HL2 280 aa22.32■■□□□ 1.16
CROCCP3-201ENST00000263511 CEP162Q5TB80 1403 aa22.31■■□□□ 1.16
CROCCP3-201ENST00000263511 CFAP53Q96M91 514 aa22.29■■□□□ 1.16
CROCCP3-201ENST00000263511 NACADO15069 1562 aa22.29■■□□□ 1.16
CROCCP3-201ENST00000263511 HAP1P54257 671 aaPredicted RBP22.27■■□□□ 1.16
CROCCP3-201ENST00000263511 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
CROCCP3-201ENST00000263511 KNSTRNQ9Y448 316 aa22.23■■□□□ 1.15
CROCCP3-201ENST00000263511 EIF5BO60841 1220 aaKnown RBP22.21■■□□□ 1.15
CROCCP3-201ENST00000263511 MIER1Q8N108 512 aa22.2■■□□□ 1.14
CROCCP3-201ENST00000263511 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
CROCCP3-201ENST00000263511 CARD11Q9BXL7 1154 aa22.19■■□□□ 1.14
CROCCP3-201ENST00000263511 TNIKQ9UKE5 1360 aa22.15■■□□□ 1.14
CROCCP3-201ENST00000263511 IRX6P78412 446 aaPredicted RBP22.15■■□□□ 1.14
CROCCP3-201ENST00000263511 PPM1GO15355 546 aaPredicted RBP22.15■■□□□ 1.14
CROCCP3-201ENST00000263511 POGKQ9P215 609 aa22.12■■□□□ 1.13
CROCCP3-201ENST00000263511 NUDCQ9Y266 331 aa22.08■■□□□ 1.13
CROCCP3-201ENST00000263511 MAPK8IP3Q9UPT6 1336 aa22.07■■□□□ 1.12
CROCCP3-201ENST00000263511 ARXQ96QS3 562 aa22.07■■□□□ 1.12
CROCCP3-201ENST00000263511 CCNB3Q8WWL7 1395 aa22.07■■□□□ 1.12
CROCCP3-201ENST00000263511 BECN1Q14457 450 aa22.05■■□□□ 1.12
CROCCP3-201ENST00000263511 NBR1Q14596 966 aa22.05■■□□□ 1.12
CROCCP3-201ENST00000263511 LMOD2Q6P5Q4 547 aa22.05■■□□□ 1.12
CROCCP3-201ENST00000263511 CDK11BP21127 795 aaKnown RBP22.04■■□□□ 1.12
CROCCP3-201ENST00000263511 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
CROCCP3-201ENST00000263511 FTSJ3Q8IY81 847 aaKnown RBP22.02■■□□□ 1.11
CROCCP3-201ENST00000263511 FHAD1B1AJZ9 1412 aa22.01■■□□□ 1.11
CROCCP3-201ENST00000263511 NCLP19338 710 aaKnown RBP22■■□□□ 1.11
CROCCP3-201ENST00000263511 DDRGK1Q96HY6 314 aa22■■□□□ 1.11
CROCCP3-201ENST00000263511 NEUROD2Q15784 382 aa21.99■■□□□ 1.11
CROCCP3-201ENST00000263511 KANK1Q14678 1352 aa21.98■■□□□ 1.11
CROCCP3-201ENST00000263511 LAS1LQ9Y4W2 734 aaKnown RBP21.97■■□□□ 1.11
CROCCP3-201ENST00000263511 CASC1Q6TDU7 716 aa21.96■■□□□ 1.11
CROCCP3-201ENST00000263511 HDGFP51858 240 aaKnown RBP21.96■■□□□ 1.11
CROCCP3-201ENST00000263511 CARMIL1Q5VZK9 1371 aa21.96■■□□□ 1.11
CROCCP3-201ENST00000263511 GLIPR1L2Q4G1C9 344 aa21.95■■□□□ 1.1
CROCCP3-201ENST00000263511 GOLGA6L22H0YM25 854 aa21.94■■□□□ 1.1
CROCCP3-201ENST00000263511 SIN3AQ96ST3 1273 aa21.93■■□□□ 1.1
CROCCP3-201ENST00000263511 TRHP20396 242 aaPredicted RBP21.92■■□□□ 1.1
CROCCP3-201ENST00000263511 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
CROCCP3-201ENST00000263511 SENP3-EIF4A1A0A087X0R7 540 aa21.92■■□□□ 1.1
CROCCP3-201ENST00000263511 CUX2O14529 1486 aa21.92■■□□□ 1.1
CROCCP3-201ENST00000263511 ANP32EQ9BTT0 268 aa21.92■■□□□ 1.1
CROCCP3-201ENST00000263511 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
CROCCP3-201ENST00000263511 TNNT2P45379 298 aaPredicted RBP21.9■■□□□ 1.1
CROCCP3-201ENST00000263511 PNNQ9H307 717 aaKnown RBP21.9■■□□□ 1.1
CROCCP3-201ENST00000263511 CHMP4BQ9H444 224 aaKnown RBP21.89■■□□□ 1.1
CROCCP3-201ENST00000263511 TMF1P82094 1093 aa21.89■■□□□ 1.09
CROCCP3-201ENST00000263511 DCAF11Q8TEB1 546 aa21.88■■□□□ 1.09
CROCCP3-201ENST00000263511 U2SURPO15042 1029 aaKnown RBP21.87■■□□□ 1.09
CROCCP3-201ENST00000263511 MLECQ14165 292 aa21.87■■□□□ 1.09
CROCCP3-201ENST00000263511 CC2D1BQ5T0F9 858 aaKnown RBP21.86■■□□□ 1.09
CROCCP3-201ENST00000263511 NPHP1O15259 732 aa21.85■■□□□ 1.09
CROCCP3-201ENST00000263511 MS4A1P11836 297 aa21.84■■□□□ 1.09
CROCCP3-201ENST00000263511 ZRSR1Q15695 479 aaKnown RBP21.83■■□□□ 1.09
CROCCP3-201ENST00000263511 SUPT16HQ9Y5B9 1047 aaKnown RBP21.83■■□□□ 1.09
CROCCP3-201ENST00000263511 FRAT1Q92837 279 aaPredicted RBP21.83■■□□□ 1.08
CROCCP3-201ENST00000263511 SRPK2P78362 688 aaKnown RBP21.8■■□□□ 1.08
CROCCP3-201ENST00000263511 CECR2Q9BXF3 1484 aa21.8■■□□□ 1.08
CROCCP3-201ENST00000263511 CARMIL2Q6F5E8 1435 aa21.78■■□□□ 1.08
CROCCP3-201ENST00000263511 OS9Q13438 667 aaPredicted RBP21.78■■□□□ 1.08
CROCCP3-201ENST00000263511 TIMELESSQ9UNS1 1208 aa21.78■■□□□ 1.08
CROCCP3-201ENST00000263511 GGT6Q6P531 493 aa21.77■■□□□ 1.08
CROCCP3-201ENST00000263511 TRIM44Q96DX7 344 aaPredicted RBP21.76■■□□□ 1.07
CROCCP3-201ENST00000263511 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
CROCCP3-201ENST00000263511 MORC1Q86VD1 984 aa21.72■■□□□ 1.07
CROCCP3-201ENST00000263511 RGS3P49796 1198 aa21.71■■□□□ 1.07
CROCCP3-201ENST00000263511 SOGA1O94964 1423 aa21.71■■□□□ 1.07
CROCCP3-201ENST00000263511 SOX12O15370 315 aa21.71■■□□□ 1.07
CROCCP3-201ENST00000263511 PPP4R2Q9NY27 417 aa21.71■■□□□ 1.07
CROCCP3-201ENST00000263511 SAFB2Q14151 953 aaKnown RBP eCLIP21.7■■□□□ 1.062e-6■■■□□ 18.7
CROCCP3-201ENST00000263511 ARHGAP35Q9NRY4 1499 aa21.69■■□□□ 1.06
CROCCP3-201ENST00000263511 PKD2Q13563 968 aa21.68■■□□□ 1.06
CROCCP3-201ENST00000263511 FGD1P98174 961 aa21.67■■□□□ 1.06
CROCCP3-201ENST00000263511 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
CROCCP3-201ENST00000263511 EFCAB2Q5VUJ9 269 aa21.67■■□□□ 1.06
CROCCP3-201ENST00000263511 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
CROCCP3-201ENST00000263511 HDGFL2Q7Z4V5 671 aaPredicted RBP21.66■■□□□ 1.06
CROCCP3-201ENST00000263511 KCNJ4P48050 445 aa21.65■■□□□ 1.06
CROCCP3-201ENST00000263511 PTMAP06454 111 aaKnown RBP21.65■■□□□ 1.06
CROCCP3-201ENST00000263511 STK26Q9P289 416 aa21.65■■□□□ 1.06
CROCCP3-201ENST00000263511 RTF1Q92541 710 aaKnown RBP21.63■■□□□ 1.05
CROCCP3-201ENST00000263511 TPRNQ4KMQ1 711 aa21.62■■□□□ 1.05
CROCCP3-201ENST00000263511 VPS8Q8N3P4 1428 aa21.62■■□□□ 1.05
CROCCP3-201ENST00000263511 SMARCA2P51531 1590 aa21.6■■□□□ 1.05
CROCCP3-201ENST00000263511 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms