RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 C14orf37Q86TY3 774 aa16.58■□□□□ 0.25
ARFGEF1-201ENST00000262215 ANP32EQ9BTT0 268 aa16.58■□□□□ 0.24
ARFGEF1-201ENST00000262215 MYH16Q9H6N6 1097 aa16.58■□□□□ 0.24
ARFGEF1-201ENST00000262215 TNNT2P45379 298 aaPredicted RBP16.57■□□□□ 0.24
ARFGEF1-201ENST00000262215 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
ARFGEF1-201ENST00000262215 TONSLQ96HA7 1378 aa16.54■□□□□ 0.24
ARFGEF1-201ENST00000262215 NAP1L5Q96NT1 182 aaPredicted RBP16.53■□□□□ 0.24
ARFGEF1-201ENST00000262215 CHIC2Q9UKJ5 165 aa16.52■□□□□ 0.24
ARFGEF1-201ENST00000262215 MRS2Q9HD23 443 aa16.52■□□□□ 0.24
ARFGEF1-201ENST00000262215 ZRSR1Q15695 479 aaKnown RBP16.52■□□□□ 0.23
ARFGEF1-201ENST00000262215 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
ARFGEF1-201ENST00000262215 MIER1Q8N108 512 aa16.46■□□□□ 0.23
ARFGEF1-201ENST00000262215 LAS1LQ9Y4W2 734 aaKnown RBP16.45■□□□□ 0.22
ARFGEF1-201ENST00000262215 GOLGA6L22H0YM25 854 aa16.44■□□□□ 0.22
ARFGEF1-201ENST00000262215 BECN1Q14457 450 aa16.44■□□□□ 0.22
ARFGEF1-201ENST00000262215 PPM1GO15355 546 aaPredicted RBP16.39■□□□□ 0.21
ARFGEF1-201ENST00000262215 CLSTN1O94985 981 aa16.37■□□□□ 0.21
ARFGEF1-201ENST00000262215 NAP1L2Q9ULW6 460 aaPredicted RBP16.37■□□□□ 0.21
ARFGEF1-201ENST00000262215 DDRGK1Q96HY6 314 aa16.36■□□□□ 0.21
ARFGEF1-201ENST00000262215 ARID3AQ99856 593 aa16.36■□□□□ 0.21
ARFGEF1-201ENST00000262215 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
ARFGEF1-201ENST00000262215 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
ARFGEF1-201ENST00000262215 NPHP1O15259 732 aa16.3■□□□□ 0.2
ARFGEF1-201ENST00000262215 RGS3P49796 1198 aa16.3■□□□□ 0.2
ARFGEF1-201ENST00000262215 ERICH6BQ5W0A0 696 aa16.28■□□□□ 0.2
ARFGEF1-201ENST00000262215 SPRYD3Q8NCJ5 442 aa16.28■□□□□ 0.2
ARFGEF1-201ENST00000262215 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.19
ARFGEF1-201ENST00000262215 FGD1P98174 961 aa16.26■□□□□ 0.19
ARFGEF1-201ENST00000262215 CASC1Q6TDU7 716 aa16.26■□□□□ 0.19
ARFGEF1-201ENST00000262215 FTSJ3Q8IY81 847 aaKnown RBP16.26■□□□□ 0.19
ARFGEF1-201ENST00000262215 LMOD2Q6P5Q4 547 aa16.24■□□□□ 0.19
ARFGEF1-201ENST00000262215 PPP1R15AO75807 674 aaPredicted RBP16.23■□□□□ 0.19
ARFGEF1-201ENST00000262215 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
ARFGEF1-201ENST00000262215 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
ARFGEF1-201ENST00000262215 FRAT1Q92837 279 aaPredicted RBP16.22■□□□□ 0.19
ARFGEF1-201ENST00000262215 HSP90AB1P08238 724 aaKnown RBP16.21■□□□□ 0.19
ARFGEF1-201ENST00000262215 PDE4CQ08493 712 aa16.21■□□□□ 0.19
ARFGEF1-201ENST00000262215 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
ARFGEF1-201ENST00000262215 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
ARFGEF1-201ENST00000262215 OS9Q13438 667 aaPredicted RBP16.19■□□□□ 0.18
ARFGEF1-201ENST00000262215 KCNJ4P48050 445 aa16.19■□□□□ 0.18
ARFGEF1-201ENST00000262215 DRC7Q8IY82 874 aa16.18■□□□□ 0.18
ARFGEF1-201ENST00000262215 GOLGA6L6A8MZA4 724 aa16.17■□□□□ 0.18
ARFGEF1-201ENST00000262215 PRM3Q9NNZ6 103 aa16.16■□□□□ 0.18
ARFGEF1-201ENST00000262215 ANO8Q9HCE9 1232 aaPredicted RBP16.15■□□□□ 0.18
ARFGEF1-201ENST00000262215 GOLGA6L4A6NEF3 574 aa16.13■□□□□ 0.17
ARFGEF1-201ENST00000262215 RRP7BPQ9NSQ0 103 aa16.13■□□□□ 0.17
ARFGEF1-201ENST00000262215 DEKP35659 375 aaKnown RBP16.13■□□□□ 0.17
ARFGEF1-201ENST00000262215 GOLGA2Q08379 1002 aa16.13■□□□□ 0.17
ARFGEF1-201ENST00000262215 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
ARFGEF1-201ENST00000262215 TSPY4P0CV99 314 aa16.11■□□□□ 0.17
ARFGEF1-201ENST00000262215 TSPY10P0CW01 314 aa16.11■□□□□ 0.17
ARFGEF1-201ENST00000262215 DCAF1Q9Y4B6 1507 aa16.11■□□□□ 0.17
ARFGEF1-201ENST00000262215 CHAF1AQ13111 956 aaPredicted RBP16.1■□□□□ 0.17
ARFGEF1-201ENST00000262215 EIF4G2P78344 907 aaKnown RBP eCLIP16.09■□□□□ 0.17
ARFGEF1-201ENST00000262215 MSNP26038 577 aaKnown RBP16.09■□□□□ 0.17
ARFGEF1-201ENST00000262215 NOP58Q9Y2X3 529 aaKnown RBP16.09■□□□□ 0.17
ARFGEF1-201ENST00000262215 SOX12O15370 315 aa16.08■□□□□ 0.16
ARFGEF1-201ENST00000262215 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
ARFGEF1-201ENST00000262215 NRDCO43847 1150 aa16.08■□□□□ 0.16
ARFGEF1-201ENST00000262215 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
ARFGEF1-201ENST00000262215 PNNQ9H307 717 aaKnown RBP16.07■□□□□ 0.16
ARFGEF1-201ENST00000262215 B4GALNT3Q6L9W6 998 aa16.06■□□□□ 0.16
ARFGEF1-201ENST00000262215 APBB1O00213 710 aa16.05■□□□□ 0.16
ARFGEF1-201ENST00000262215 NOC3LQ8WTT2 800 aaKnown RBP16.05■□□□□ 0.16
ARFGEF1-201ENST00000262215 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
ARFGEF1-201ENST00000262215 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
ARFGEF1-201ENST00000262215 GZF1Q9H116 711 aaPredicted RBP16.03■□□□□ 0.16
ARFGEF1-201ENST00000262215 U2SURPO15042 1029 aaKnown RBP16.03■□□□□ 0.16
ARFGEF1-201ENST00000262215 CC2D1BQ5T0F9 858 aaKnown RBP16.03■□□□□ 0.16
ARFGEF1-201ENST00000262215 ABCC9O60706 1549 aa16.02■□□□□ 0.16
ARFGEF1-201ENST00000262215 FBXO3Q9UK99 471 aa16.01■□□□□ 0.15
ARFGEF1-201ENST00000262215 GNL2Q13823 731 aaKnown RBP16■□□□□ 0.15
ARFGEF1-201ENST00000262215 HSCBQ8IWL3 235 aa15.99■□□□□ 0.15
ARFGEF1-201ENST00000262215 TNNT3P45378 269 aaPredicted RBP15.98■□□□□ 0.15
ARFGEF1-201ENST00000262215 RBM19Q9Y4C8 960 aaKnown RBP15.96■□□□□ 0.15
ARFGEF1-201ENST00000262215 CREBRFQ8IUR6 639 aa15.94■□□□□ 0.14
ARFGEF1-201ENST00000262215 A0A0U1RQG5 324 aaPredicted RBP15.93■□□□□ 0.14
ARFGEF1-201ENST00000262215 KIAA2012Q0VF49 1180 aa15.93■□□□□ 0.14
ARFGEF1-201ENST00000262215 ZNF330Q9Y3S2 320 aaPredicted RBP15.92■□□□□ 0.14
ARFGEF1-201ENST00000262215 POGKQ9P215 609 aa15.92■□□□□ 0.14
ARFGEF1-201ENST00000262215 CARD11Q9BXL7 1154 aa15.92■□□□□ 0.14
ARFGEF1-201ENST00000262215 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
ARFGEF1-201ENST00000262215 PPP4R2Q9NY27 417 aa15.91■□□□□ 0.14
ARFGEF1-201ENST00000262215 NUDCQ9Y266 331 aa15.9■□□□□ 0.14
ARFGEF1-201ENST00000262215 WWC1Q8IX03 1113 aa15.89■□□□□ 0.13
ARFGEF1-201ENST00000262215 SLKQ9H2G2 1235 aaPredicted RBP15.88■□□□□ 0.13
ARFGEF1-201ENST00000262215 HSP90B1P14625 803 aaKnown RBP15.87■□□□□ 0.13
ARFGEF1-201ENST00000262215 L1TD1Q5T7N2 865 aaKnown RBP15.86■□□□□ 0.13
ARFGEF1-201ENST00000262215 SAFB2Q14151 953 aaKnown RBP eCLIP15.86■□□□□ 0.13
ARFGEF1-201ENST00000262215 PATL2C9JE40 543 aaKnown RBP15.85■□□□□ 0.13
ARFGEF1-201ENST00000262215 MCCP23508 829 aa15.85■□□□□ 0.13
ARFGEF1-201ENST00000262215 TSHZ2Q9NRE2 1034 aa15.84■□□□□ 0.13
ARFGEF1-201ENST00000262215 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
ARFGEF1-201ENST00000262215 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
ARFGEF1-201ENST00000262215 NOL8Q76FK4 1167 aaKnown RBP15.84■□□□□ 0.13
ARFGEF1-201ENST00000262215 CHMP7Q8WUX9 453 aaPredicted RBP15.81■□□□□ 0.12
ARFGEF1-201ENST00000262215 FOXD4L5Q5VV16 416 aaPredicted RBP15.79■□□□□ 0.12
ARFGEF1-201ENST00000262215 FOXD4L4Q8WXT5 416 aaPredicted RBP15.79■□□□□ 0.12
ARFGEF1-201ENST00000262215 KIAA1211Q6ZU35 1233 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms