RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 FAM163AQ96GL9 167 aaPredicted RBP6.34□□□□□ -1.39
ATF1-201ENST00000262053 CREBZFQ9NS37 354 aa6.33□□□□□ -1.4
ATF1-201ENST00000262053 PHF12Q96QT6 1004 aa6.3□□□□□ -1.4
ATF1-201ENST00000262053 ATMINO43313 823 aaPredicted RBP6.29□□□□□ -1.4
ATF1-201ENST00000262053 PELP1Q8IZL8 1130 aaKnown RBP6.28□□□□□ -1.4
ATF1-201ENST00000262053 LCE2DQ5TA82 110 aaPredicted RBP6.27□□□□□ -1.41
ATF1-201ENST00000262053 CDAN1Q8IWY9 1227 aa6.27□□□□□ -1.41
ATF1-201ENST00000262053 POTEJP0CG39 1038 aa6.23□□□□□ -1.41
ATF1-201ENST00000262053 MS4A3Q96HJ5 214 aa6.23□□□□□ -1.41
ATF1-201ENST00000262053 TIE1P35590 1138 aa6.16□□□□□ -1.42
ATF1-201ENST00000262053 ATN1P54259 1190 aaPredicted RBP6.16□□□□□ -1.42
ATF1-201ENST00000262053 SEC24BO95487 1268 aa6.16□□□□□ -1.42
ATF1-201ENST00000262053 TMEM121BQ9BXQ6 578 aaPredicted RBP6.16□□□□□ -1.42
ATF1-201ENST00000262053 MMRN1Q13201 1228 aa6.15□□□□□ -1.43
ATF1-201ENST00000262053 IER5LQ5T953 404 aa6.15□□□□□ -1.43
ATF1-201ENST00000262053 SNPHO15079 494 aa6.13□□□□□ -1.43
ATF1-201ENST00000262053 MNX1P50219 401 aaPredicted RBP6.13□□□□□ -1.43
ATF1-201ENST00000262053 SPNS2Q8IVW8 549 aa6.11□□□□□ -1.43
ATF1-201ENST00000262053 BMP2KQ9NSY1 1161 aaPredicted RBP6.1□□□□□ -1.43
ATF1-201ENST00000262053 FKBP8Q14318 412 aa6.1□□□□□ -1.43
ATF1-201ENST00000262053 KIF12Q96FN5 646 aa6.09□□□□□ -1.43
ATF1-201ENST00000262053 ST18O60284 1047 aa6.08□□□□□ -1.44
ATF1-201ENST00000262053 SLAIN1Q8ND83 568 aa6.08□□□□□ -1.44
ATF1-201ENST00000262053 CCDC61Q9Y6R9 512 aa6.08□□□□□ -1.44
ATF1-201ENST00000262053 POTEFA5A3E0 1075 aa6.07□□□□□ -1.44
ATF1-201ENST00000262053 SGIP1Q9BQI5 828 aa6.07□□□□□ -1.44
ATF1-201ENST00000262053 TSPYL2Q9H2G4 693 aaPredicted RBP6.07□□□□□ -1.44
ATF1-201ENST00000262053 SPDYE4A6NLX3 237 aa6.06□□□□□ -1.44
ATF1-201ENST00000262053 PLEKHG5O94827 1062 aa6.06□□□□□ -1.44
ATF1-201ENST00000262053 TTLL13PA6NNM8 815 aa6.02□□□□□ -1.45
ATF1-201ENST00000262053 PLCG2P16885 1265 aa6.01□□□□□ -1.45
ATF1-201ENST00000262053 COLQQ9Y215 455 aaPredicted RBP6.01□□□□□ -1.45
ATF1-201ENST00000262053 MAP3K13O43283 966 aa5.99□□□□□ -1.45
ATF1-201ENST00000262053 TRIM35Q9UPQ4 493 aa5.99□□□□□ -1.45
ATF1-201ENST00000262053 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.97□□□□□ -1.45
ATF1-201ENST00000262053 TRPC6Q9Y210 931 aa5.94□□□□□ -1.46
ATF1-201ENST00000262053 EMP3P54852 163 aa5.92□□□□□ -1.46
ATF1-201ENST00000262053 PCDHB13Q9Y5F0 798 aa5.92□□□□□ -1.46
ATF1-201ENST00000262053 OCEL1Q9H607 264 aa5.91□□□□□ -1.46
ATF1-201ENST00000262053 ZBTB47Q9UFB7 747 aaPredicted RBP5.91□□□□□ -1.46
ATF1-201ENST00000262053 IRX5P78411 483 aaPredicted RBP5.89□□□□□ -1.47
ATF1-201ENST00000262053 TMEM106CQ9BVX2 250 aa5.89□□□□□ -1.47
ATF1-201ENST00000262053 MARVELD3Q96A59 401 aa5.88□□□□□ -1.47
ATF1-201ENST00000262053 RASEFQ8IZ41 740 aa5.86□□□□□ -1.47
ATF1-201ENST00000262053 PROM2Q8N271 834 aa5.86□□□□□ -1.47
ATF1-201ENST00000262053 L3MBTL3Q96JM7 780 aaPredicted RBP5.86□□□□□ -1.47
ATF1-201ENST00000262053 C3orf67Q6ZVT6 689 aa5.86□□□□□ -1.47
ATF1-201ENST00000262053 MIER1Q8N108 512 aa5.85□□□□□ -1.47
ATF1-201ENST00000262053 HS3ST6Q96QI5 342 aa5.85□□□□□ -1.47
ATF1-201ENST00000262053 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.47
ATF1-201ENST00000262053 KRTAP3-2Q9BYR7 98 aa5.84□□□□□ -1.47
ATF1-201ENST00000262053 PTGER2P43116 358 aa5.84□□□□□ -1.47
ATF1-201ENST00000262053 RNF166Q96A37 237 aaPredicted RBP5.83□□□□□ -1.48
ATF1-201ENST00000262053 FAM205CA6NFA0 338 aa5.82□□□□□ -1.48
ATF1-201ENST00000262053 IFNL1Q8IU54 200 aa5.82□□□□□ -1.48
ATF1-201ENST00000262053 FAM212AQ96EL1 285 aa5.82□□□□□ -1.48
ATF1-201ENST00000262053 PLCD3Q8N3E9 789 aa5.77□□□□□ -1.49
ATF1-201ENST00000262053 MYT1LQ9UL68 1186 aa5.76□□□□□ -1.49
ATF1-201ENST00000262053 GOLGA2Q08379 1002 aa5.76□□□□□ -1.49
ATF1-201ENST00000262053 VASPP50552 380 aaPredicted RBP5.74□□□□□ -1.49
ATF1-201ENST00000262053 NUBP1P53384 320 aa5.74□□□□□ -1.49
ATF1-201ENST00000262053 MKRN3Q13064 507 aaKnown RBP5.74□□□□□ -1.49
ATF1-201ENST00000262053 FBXO3Q9UK99 471 aa5.74□□□□□ -1.49
ATF1-201ENST00000262053 POTEB3A0JP26 581 aa5.73□□□□□ -1.49
ATF1-201ENST00000262053 G3V3G9 751 aa5.73□□□□□ -1.49
ATF1-201ENST00000262053 RIMBP2O15034 1052 aa5.73□□□□□ -1.49
ATF1-201ENST00000262053 DOK7Q18PE1 504 aa5.73□□□□□ -1.49
ATF1-201ENST00000262053 DCAF8Q5TAQ9 597 aa5.73□□□□□ -1.49
ATF1-201ENST00000262053 POTEBQ6S5H4 581 aa5.73□□□□□ -1.49
ATF1-201ENST00000262053 ZNF710Q8N1W2 664 aa5.73□□□□□ -1.49
ATF1-201ENST00000262053 HOXB1P14653 301 aaPredicted RBP5.72□□□□□ -1.49
ATF1-201ENST00000262053 ERBB3P21860 1342 aa5.72□□□□□ -1.49
ATF1-201ENST00000262053 IFNLR1Q8IU57 520 aaPredicted RBP5.72□□□□□ -1.49
ATF1-201ENST00000262053 PDCD7Q8N8D1 485 aaKnown RBP5.7□□□□□ -1.5
ATF1-201ENST00000262053 RTN4Q9NQC3 1192 aaKnown RBP5.69□□□□□ -1.5
ATF1-201ENST00000262053 ZNF467Q7Z7K2 595 aaPredicted RBP5.69□□□□□ -1.5
ATF1-201ENST00000262053 ZSWIM6Q9HCJ5 1215 aa5.67□□□□□ -1.5
ATF1-201ENST00000262053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATF1-201ENST00000262053 ZNF687Q8N1G0 1237 aa5.65□□□□□ -1.5
ATF1-201ENST00000262053 HOXB3P14651 431 aaPredicted RBP5.64□□□□□ -1.51
ATF1-201ENST00000262053 AMER1Q5JTC6 1135 aaPredicted RBP5.64□□□□□ -1.51
ATF1-201ENST00000262053 KLHL34Q8N239 644 aa5.63□□□□□ -1.51
ATF1-201ENST00000262053 VARS2Q5ST30 1063 aaKnown RBP5.62□□□□□ -1.51
ATF1-201ENST00000262053 BOLA1Q9Y3E2 137 aa5.61□□□□□ -1.51
ATF1-201ENST00000262053 PYGBP11216 843 aa5.6□□□□□ -1.51
ATF1-201ENST00000262053 GSE1Q14687 1217 aa5.6□□□□□ -1.51
ATF1-201ENST00000262053 ILDR1Q86SU0 546 aaPredicted RBP5.6□□□□□ -1.51
ATF1-201ENST00000262053 PCDHB8Q9UN66 801 aa5.6□□□□□ -1.51
ATF1-201ENST00000262053 PLA2G2EQ9NZK7 142 aa5.59□□□□□ -1.51
ATF1-201ENST00000262053 RGS20O76081 388 aa5.59□□□□□ -1.52
ATF1-201ENST00000262053 HCSTQ9UBK5 93 aa5.59□□□□□ -1.52
ATF1-201ENST00000262053 CHRM1P11229 460 aaPredicted RBP5.58□□□□□ -1.52
ATF1-201ENST00000262053 PSEN1P49768 467 aa5.56□□□□□ -1.52
ATF1-201ENST00000262053 PBX2P40425 430 aa5.55□□□□□ -1.52
ATF1-201ENST00000262053 SPOCK2Q92563 424 aa5.55□□□□□ -1.52
ATF1-201ENST00000262053 PDAP1Q13442 181 aaKnown RBP5.54□□□□□ -1.52
ATF1-201ENST00000262053 PKD2Q13563 968 aa5.54□□□□□ -1.52
ATF1-201ENST00000262053 ANKRD13DQ6ZTN6 518 aa5.53□□□□□ -1.52
ATF1-201ENST00000262053 LSM11P83369 360 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATF1-201ENST00000262053 CIZ1Q9ULV3 898 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms