RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 RGL3Q3MIN7 710 aa14.36□□□□□ -0.11
PUM1-201ENST00000257075 TMC1Q8TDI8 760 aa14.36□□□□□ -0.11
PUM1-201ENST00000257075 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
PUM1-201ENST00000257075 WDR43Q15061 677 aaKnown RBP eCLIP14.35□□□□□ -0.11
PUM1-201ENST00000257075 EEA1Q15075 1411 aa14.33□□□□□ -0.12
PUM1-201ENST00000257075 POGKQ9P215 609 aa14.31□□□□□ -0.12
PUM1-201ENST00000257075 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
PUM1-201ENST00000257075 ARXQ96QS3 562 aa14.29□□□□□ -0.12
PUM1-201ENST00000257075 CECR2Q9BXF3 1484 aa14.27□□□□□ -0.13
PUM1-201ENST00000257075 SALL2Q9Y467 1007 aaPredicted RBP14.26□□□□□ -0.13
PUM1-201ENST00000257075 CDCA8Q53HL2 280 aa14.25□□□□□ -0.13
PUM1-201ENST00000257075 CARMIL2Q6F5E8 1435 aa14.25□□□□□ -0.13
PUM1-201ENST00000257075 KANK1Q14678 1352 aa14.25□□□□□ -0.13
PUM1-201ENST00000257075 GOLGA3Q08378 1498 aa14.25□□□□□ -0.13
PUM1-201ENST00000257075 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
PUM1-201ENST00000257075 CCNB3Q8WWL7 1395 aa14.24□□□□□ -0.13
PUM1-201ENST00000257075 AEBP2Q6ZN18 517 aaPredicted RBP14.23□□□□□ -0.13
PUM1-201ENST00000257075 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
PUM1-201ENST00000257075 NPHP1O15259 732 aa14.23□□□□□ -0.13
PUM1-201ENST00000257075 PPM1GO15355 546 aaPredicted RBP14.22□□□□□ -0.13
PUM1-201ENST00000257075 GGT6Q6P531 493 aa14.22□□□□□ -0.13
PUM1-201ENST00000257075 CUX2O14529 1486 aa14.21□□□□□ -0.13
PUM1-201ENST00000257075 CFAP53Q96M91 514 aa14.21□□□□□ -0.13
PUM1-201ENST00000257075 CARMIL1Q5VZK9 1371 aa14.21□□□□□ -0.13
PUM1-201ENST00000257075 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.2□□□□□ -0.14
PUM1-201ENST00000257075 DDX10Q13206 875 aaKnown RBP14.2□□□□□ -0.14
PUM1-201ENST00000257075 EIF4G2P78344 907 aaKnown RBP eCLIP14.19□□□□□ -0.146e-9■■■■■ 29.6
PUM1-201ENST00000257075 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
PUM1-201ENST00000257075 CEP164Q9UPV0 1460 aa14.16□□□□□ -0.14
PUM1-201ENST00000257075 HSP90AA1P07900 732 aaKnown RBP14.15□□□□□ -0.14
PUM1-201ENST00000257075 HNRNPUQ00839 825 aaKnown RBP eCLIP14.15□□□□□ -0.14
PUM1-201ENST00000257075 EFCAB2Q5VUJ9 269 aa14.15□□□□□ -0.14
PUM1-201ENST00000257075 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
PUM1-201ENST00000257075 SOGA1O94964 1423 aa14.15□□□□□ -0.14
PUM1-201ENST00000257075 SMARCA2P51531 1590 aa14.14□□□□□ -0.15
PUM1-201ENST00000257075 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
PUM1-201ENST00000257075 KNSTRNQ9Y448 316 aa14.14□□□□□ -0.15
PUM1-201ENST00000257075 UPF2Q9HAU5 1272 aaKnown RBP14.14□□□□□ -0.15
PUM1-201ENST00000257075 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
PUM1-201ENST00000257075 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
PUM1-201ENST00000257075 MRS2Q9HD23 443 aa14.12□□□□□ -0.15
PUM1-201ENST00000257075 FHAD1B1AJZ9 1412 aa14.11□□□□□ -0.15
PUM1-201ENST00000257075 CARD11Q9BXL7 1154 aa14.11□□□□□ -0.15
PUM1-201ENST00000257075 NUDCQ9Y266 331 aa14.09□□□□□ -0.15
PUM1-201ENST00000257075 CEP162Q5TB80 1403 aa14.09□□□□□ -0.15
PUM1-201ENST00000257075 EID1Q9Y6B2 187 aa14.06□□□□□ -0.16
PUM1-201ENST00000257075 MAPK8IP3Q9UPT6 1336 aa14.06□□□□□ -0.16
PUM1-201ENST00000257075 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
PUM1-201ENST00000257075 SRPK2P78362 688 aaKnown RBP14.05□□□□□ -0.16
PUM1-201ENST00000257075 CCDC9Q9Y3X0 531 aaKnown RBP14.04□□□□□ -0.16
PUM1-201ENST00000257075 SOX12O15370 315 aa14.03□□□□□ -0.16
PUM1-201ENST00000257075 TNIKQ9UKE5 1360 aa14.03□□□□□ -0.16
PUM1-201ENST00000257075 HIRIP3Q9BW71 556 aaPredicted RBP14.02□□□□□ -0.16
PUM1-201ENST00000257075 ANP32AP39687 249 aaKnown RBP14.02□□□□□ -0.17
PUM1-201ENST00000257075 JPH4Q96JJ6 628 aa14.01□□□□□ -0.17
PUM1-201ENST00000257075 SAFB2Q14151 953 aaKnown RBP eCLIP14.01□□□□□ -0.17
PUM1-201ENST00000257075 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
PUM1-201ENST00000257075 STK26Q9P289 416 aa14□□□□□ -0.17
PUM1-201ENST00000257075 CSB-PGBD3P0DP91 1061 aa14□□□□□ -0.17
PUM1-201ENST00000257075 LAS1LQ9Y4W2 734 aaKnown RBP13.99□□□□□ -0.17
PUM1-201ENST00000257075 DCAF11Q8TEB1 546 aa13.98□□□□□ -0.17
PUM1-201ENST00000257075 KIF3BO15066 747 aa13.98□□□□□ -0.17
PUM1-201ENST00000257075 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
PUM1-201ENST00000257075 PNNQ9H307 717 aaKnown RBP13.97□□□□□ -0.17
PUM1-201ENST00000257075 U2SURPO15042 1029 aaKnown RBP13.96□□□□□ -0.17
PUM1-201ENST00000257075 NEUROD2Q15784 382 aa13.95□□□□□ -0.18
PUM1-201ENST00000257075 WASHC2CQ9Y4E1 1318 aa13.95□□□□□ -0.18
PUM1-201ENST00000257075 TMF1P82094 1093 aa13.95□□□□□ -0.18
PUM1-201ENST00000257075 SPAG9O60271 1321 aaKnown RBP13.94□□□□□ -0.18
PUM1-201ENST00000257075 GOLGA2Q08379 1002 aa13.94□□□□□ -0.18
PUM1-201ENST00000257075 HDGFL2Q7Z4V5 671 aaPredicted RBP13.93□□□□□ -0.18
PUM1-201ENST00000257075 CCDC136Q96JN2 1154 aa13.93□□□□□ -0.18
PUM1-201ENST00000257075 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
PUM1-201ENST00000257075 GTF3C3Q9Y5Q9 886 aa13.92□□□□□ -0.18
PUM1-201ENST00000257075 CDK11BP21127 795 aaKnown RBP13.92□□□□□ -0.18
PUM1-201ENST00000257075 ANP32BQ92688 251 aaKnown RBP13.92□□□□□ -0.18
PUM1-201ENST00000257075 RSPH4AQ5TD94 716 aa13.9□□□□□ -0.18
PUM1-201ENST00000257075 FMN1Q68DA7 1419 aa13.9□□□□□ -0.18
PUM1-201ENST00000257075 MROH2BQ7Z745 1585 aa13.89□□□□□ -0.19
PUM1-201ENST00000257075 FKBP8Q14318 412 aa13.88□□□□□ -0.19
PUM1-201ENST00000257075 TMX4Q9H1E5 349 aaPredicted RBP13.88□□□□□ -0.19
PUM1-201ENST00000257075 PKD2Q13563 968 aa13.88□□□□□ -0.19
PUM1-201ENST00000257075 FTSJ3Q8IY81 847 aaKnown RBP13.88□□□□□ -0.19
PUM1-201ENST00000257075 FAM69CQ0P6D2 419 aa13.88□□□□□ -0.19
PUM1-201ENST00000257075 RTF1Q92541 710 aaKnown RBP13.87□□□□□ -0.19
PUM1-201ENST00000257075 PTPRGP23470 1445 aa13.87□□□□□ -0.19
PUM1-201ENST00000257075 ANKRD30AQ9BXX3 1397 aa13.86□□□□□ -0.19
PUM1-201ENST00000257075 HNRNPMP52272 730 aaKnown RBP eCLIP13.86□□□□□ -0.192e-7■■■■□ 20.6
PUM1-201ENST00000257075 OS9Q13438 667 aaPredicted RBP13.86□□□□□ -0.19
PUM1-201ENST00000257075 MORC1Q86VD1 984 aa13.86□□□□□ -0.19
PUM1-201ENST00000257075 NGDNQ8NEJ9 315 aaKnown RBP13.85□□□□□ -0.19
PUM1-201ENST00000257075 CC2D1BQ5T0F9 858 aaKnown RBP13.84□□□□□ -0.19
PUM1-201ENST00000257075 NUP155O75694 1391 aa13.84□□□□□ -0.19
PUM1-201ENST00000257075 ARHGAP35Q9NRY4 1499 aa13.83□□□□□ -0.2
PUM1-201ENST00000257075 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
PUM1-201ENST00000257075 CHMP4BQ9H444 224 aaKnown RBP13.83□□□□□ -0.2
PUM1-201ENST00000257075 FANCD2Q9BXW9 1451 aa13.83□□□□□ -0.2
PUM1-201ENST00000257075 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.2
PUM1-201ENST00000257075 ZNF330Q9Y3S2 320 aaPredicted RBP13.82□□□□□ -0.2
PUM1-201ENST00000257075 SIN3AQ96ST3 1273 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms