RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
SORT1-201ENST00000256637 WDR43Q15061 677 aaKnown RBP eCLIP22.88■■□□□ 1.25
SORT1-201ENST00000256637 PLEKHD1A6NEE1 506 aa22.86■■□□□ 1.25
SORT1-201ENST00000256637 LAS1LQ9Y4W2 734 aaKnown RBP22.86■■□□□ 1.25
SORT1-201ENST00000256637 RB1CC1Q8TDY2 1594 aa22.86■■□□□ 1.25
SORT1-201ENST00000256637 DDX10Q13206 875 aaKnown RBP22.85■■□□□ 1.25
SORT1-201ENST00000256637 EIF4G1Q04637 1599 aaKnown RBP22.84■■□□□ 1.25
SORT1-201ENST00000256637 TNNT2P45379 298 aaPredicted RBP22.84■■□□□ 1.25
SORT1-201ENST00000256637 TPRNQ4KMQ1 711 aa22.83■■□□□ 1.25
SORT1-201ENST00000256637 CCDC9Q9Y3X0 531 aaKnown RBP22.79■■□□□ 1.24
SORT1-201ENST00000256637 SAFB2Q14151 953 aaKnown RBP eCLIP22.78■■□□□ 1.24
SORT1-201ENST00000256637 NCBP3Q53F19 620 aaKnown RBP22.78■■□□□ 1.24
SORT1-201ENST00000256637 POGKQ9P215 609 aa22.74■■□□□ 1.23
SORT1-201ENST00000256637 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
SORT1-201ENST00000256637 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.72■■□□□ 1.23
SORT1-201ENST00000256637 GTF3C3Q9Y5Q9 886 aa22.69■■□□□ 1.22
SORT1-201ENST00000256637 IRX6P78412 446 aaPredicted RBP22.67■■□□□ 1.22
SORT1-201ENST00000256637 NEUROD2Q15784 382 aa22.66■■□□□ 1.22
SORT1-201ENST00000256637 PAK3O75914 559 aaPredicted RBP22.65■■□□□ 1.22
SORT1-201ENST00000256637 CFDP1Q9UEE9 299 aaPredicted RBP22.63■■□□□ 1.21
SORT1-201ENST00000256637 STK26Q9P289 416 aa22.62■■□□□ 1.21
SORT1-201ENST00000256637 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
SORT1-201ENST00000256637 GGT6Q6P531 493 aa22.6■■□□□ 1.21
SORT1-201ENST00000256637 ZNF330Q9Y3S2 320 aaPredicted RBP22.58■■□□□ 1.2
SORT1-201ENST00000256637 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.2
SORT1-201ENST00000256637 MYH16Q9H6N6 1097 aa22.57■■□□□ 1.2
SORT1-201ENST00000256637 FKBP8Q14318 412 aa22.55■■□□□ 1.2
SORT1-201ENST00000256637 CDK11BP21127 795 aaKnown RBP22.54■■□□□ 1.2
SORT1-201ENST00000256637 NUTM2DQ5VT03 806 aaPredicted RBP22.54■■□□□ 1.2
SORT1-201ENST00000256637 ANP32AP39687 249 aaKnown RBP22.52■■□□□ 1.2
SORT1-201ENST00000256637 PHF23Q9BUL5 403 aaPredicted RBP22.5■■□□□ 1.19
SORT1-201ENST00000256637 AMER1Q5JTC6 1135 aaPredicted RBP22.5■■□□□ 1.19
SORT1-201ENST00000256637 ISY1Q9ULR0 285 aaKnown RBP22.5■■□□□ 1.19
SORT1-201ENST00000256637 UPF2Q9HAU5 1272 aaKnown RBP22.49■■□□□ 1.19
SORT1-201ENST00000256637 MRS2Q9HD23 443 aa22.48■■□□□ 1.19
SORT1-201ENST00000256637 GOLGA2Q08379 1002 aa22.45■■□□□ 1.19
SORT1-201ENST00000256637 CC2D1BQ5T0F9 858 aaKnown RBP22.45■■□□□ 1.18
SORT1-201ENST00000256637 U2SURPO15042 1029 aaKnown RBP22.45■■□□□ 1.18
SORT1-201ENST00000256637 CSB-PGBD3P0DP91 1061 aa22.44■■□□□ 1.18
SORT1-201ENST00000256637 SRPK2P78362 688 aaKnown RBP22.42■■□□□ 1.18
SORT1-201ENST00000256637 NUTM2FA1L443 756 aa22.42■■□□□ 1.18
SORT1-201ENST00000256637 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.42■■□□□ 1.18
SORT1-201ENST00000256637 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.18
SORT1-201ENST00000256637 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
SORT1-201ENST00000256637 NAP1L2Q9ULW6 460 aaPredicted RBP22.38■■□□□ 1.17
SORT1-201ENST00000256637 CLSTN1O94985 981 aa22.38■■□□□ 1.17
SORT1-201ENST00000256637 OS9Q13438 667 aaPredicted RBP22.36■■□□□ 1.17
SORT1-201ENST00000256637 MEX3CQ5U5Q3 659 aaKnown RBP22.35■■□□□ 1.17
SORT1-201ENST00000256637 CARD11Q9BXL7 1154 aa22.34■■□□□ 1.17
SORT1-201ENST00000256637 KNSTRNQ9Y448 316 aa22.34■■□□□ 1.17
SORT1-201ENST00000256637 KLHL34Q8N239 644 aa22.33■■□□□ 1.17
SORT1-201ENST00000256637 ANP32BQ92688 251 aaKnown RBP22.33■■□□□ 1.16
SORT1-201ENST00000256637 CCDC136Q96JN2 1154 aa22.32■■□□□ 1.16
SORT1-201ENST00000256637 CFAP53Q96M91 514 aa22.31■■□□□ 1.16
SORT1-201ENST00000256637 CLIP1P30622 1438 aa22.31■■□□□ 1.16
SORT1-201ENST00000256637 MSH5O43196 834 aa22.3■■□□□ 1.16
SORT1-201ENST00000256637 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
SORT1-201ENST00000256637 MAPK8IP3Q9UPT6 1336 aa22.29■■□□□ 1.16
SORT1-201ENST00000256637 RSF1Q96T23 1441 aaPredicted RBP22.28■■□□□ 1.16
SORT1-201ENST00000256637 NBR1Q14596 966 aa22.28■■□□□ 1.16
SORT1-201ENST00000256637 FTSJ3Q8IY81 847 aaKnown RBP22.26■■□□□ 1.15
SORT1-201ENST00000256637 EIF4G2P78344 907 aaKnown RBP eCLIP22.25■■□□□ 1.15
SORT1-201ENST00000256637 KANK1Q14678 1352 aa22.23■■□□□ 1.15
SORT1-201ENST00000256637 FRAT1Q92837 279 aaPredicted RBP22.22■■□□□ 1.15
SORT1-201ENST00000256637 DCAF11Q8TEB1 546 aa22.22■■□□□ 1.15
SORT1-201ENST00000256637 FOXD1Q16676 465 aa22.21■■□□□ 1.15
SORT1-201ENST00000256637 HDGFP51858 240 aaKnown RBP22.19■■□□□ 1.14
SORT1-201ENST00000256637 LTV1Q96GA3 475 aaPredicted RBP22.18■■□□□ 1.14
SORT1-201ENST00000256637 CCNB3Q8WWL7 1395 aa22.17■■□□□ 1.14
SORT1-201ENST00000256637 G3V3G9 751 aa22.15■■□□□ 1.14
SORT1-201ENST00000256637 DCAF8Q5TAQ9 597 aa22.15■■□□□ 1.14
SORT1-201ENST00000256637 NCLP19338 710 aaKnown RBP22.15■■□□□ 1.14
SORT1-201ENST00000256637 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
SORT1-201ENST00000256637 SIN3AQ96ST3 1273 aa22.13■■□□□ 1.13
SORT1-201ENST00000256637 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
SORT1-201ENST00000256637 APBB1O00213 710 aa22.11■■□□□ 1.13
SORT1-201ENST00000256637 TMX4Q9H1E5 349 aaPredicted RBP22.11■■□□□ 1.13
SORT1-201ENST00000256637 CUX2O14529 1486 aa22.11■■□□□ 1.13
SORT1-201ENST00000256637 NACADO15069 1562 aa22.1■■□□□ 1.13
SORT1-201ENST00000256637 NUDCQ9Y266 331 aa22.09■■□□□ 1.13
SORT1-201ENST00000256637 CHMP3Q9Y3E7 222 aa22.09■■□□□ 1.13
SORT1-201ENST00000256637 FGD1P98174 961 aa22.08■■□□□ 1.13
SORT1-201ENST00000256637 RTF1Q92541 710 aaKnown RBP22.06■■□□□ 1.12
SORT1-201ENST00000256637 KCNJ4P48050 445 aa22.05■■□□□ 1.12
SORT1-201ENST00000256637 ANO8Q9HCE9 1232 aaPredicted RBP22.05■■□□□ 1.12
SORT1-201ENST00000256637 EVA1CP58658 441 aa22.05■■□□□ 1.12
SORT1-201ENST00000256637 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.127e-9■■■■□ 23.5
SORT1-201ENST00000256637 TDRD9Q8NDG6 1382 aaKnown RBP22.04■■□□□ 1.12
SORT1-201ENST00000256637 EID1Q9Y6B2 187 aa22.03■■□□□ 1.12
SORT1-201ENST00000256637 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
SORT1-201ENST00000256637 SMARCA2P51531 1590 aa22.03■■□□□ 1.12
SORT1-201ENST00000256637 CDCA8Q53HL2 280 aa22.02■■□□□ 1.12
SORT1-201ENST00000256637 CASC1Q6TDU7 716 aa22.01■■□□□ 1.11
SORT1-201ENST00000256637 KIF3BO15066 747 aa22■■□□□ 1.11
SORT1-201ENST00000256637 NGDNQ8NEJ9 315 aaKnown RBP21.99■■□□□ 1.11
SORT1-201ENST00000256637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.98■■□□□ 1.113e-7■■□□□ 13.4
SORT1-201ENST00000256637 EIF5BO60841 1220 aaKnown RBP21.98■■□□□ 1.11
SORT1-201ENST00000256637 MORC1Q86VD1 984 aa21.98■■□□□ 1.11
SORT1-201ENST00000256637 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
SORT1-201ENST00000256637 SYTL4Q96C24 671 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms