RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
EFR3A-201ENST00000254624 TMC1Q8TDI8 760 aa24.61■■□□□ 1.53
EFR3A-201ENST00000254624 HNRNPUQ00839 825 aaKnown RBP eCLIP24.59■■□□□ 1.53
EFR3A-201ENST00000254624 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
EFR3A-201ENST00000254624 EIF4G2P78344 907 aaKnown RBP eCLIP24.59■■□□□ 1.53
EFR3A-201ENST00000254624 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.53
EFR3A-201ENST00000254624 FAM9BQ8IZU0 186 aa24.58■■□□□ 1.53
EFR3A-201ENST00000254624 WDR43Q15061 677 aaKnown RBP eCLIP24.56■■□□□ 1.52
EFR3A-201ENST00000254624 PPP1R15AO75807 674 aaPredicted RBP24.54■■□□□ 1.52
EFR3A-201ENST00000254624 BCL11AQ9H165 835 aa24.54■■□□□ 1.52
EFR3A-201ENST00000254624 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
EFR3A-201ENST00000254624 CCNB3Q8WWL7 1395 aa24.47■■□□□ 1.51
EFR3A-201ENST00000254624 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.47■■□□□ 1.51
EFR3A-201ENST00000254624 MRS2Q9HD23 443 aa24.46■■□□□ 1.51
EFR3A-201ENST00000254624 ANP32AP39687 249 aaKnown RBP24.45■■□□□ 1.51
EFR3A-201ENST00000254624 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
EFR3A-201ENST00000254624 SOGA1O94964 1423 aa24.44■■□□□ 1.5
EFR3A-201ENST00000254624 CDCA8Q53HL2 280 aa24.43■■□□□ 1.5
EFR3A-201ENST00000254624 ARID4BQ4LE39 1312 aaPredicted RBP24.42■■□□□ 1.5
EFR3A-201ENST00000254624 FKBP8Q14318 412 aa24.39■■□□□ 1.5
EFR3A-201ENST00000254624 RGL3Q3MIN7 710 aa24.38■■□□□ 1.49
EFR3A-201ENST00000254624 CARMIL2Q6F5E8 1435 aa24.36■■□□□ 1.49
EFR3A-201ENST00000254624 SALL2Q9Y467 1007 aaPredicted RBP24.36■■□□□ 1.49
EFR3A-201ENST00000254624 UPF2Q9HAU5 1272 aaKnown RBP24.31■■□□□ 1.48
EFR3A-201ENST00000254624 ABCC8Q09428 1581 aa24.3■■□□□ 1.48
EFR3A-201ENST00000254624 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
EFR3A-201ENST00000254624 HIRIP3Q9BW71 556 aaPredicted RBP24.28■■□□□ 1.48
EFR3A-201ENST00000254624 SCAF1Q9H7N4 1312 aaKnown RBP24.28■■□□□ 1.48
EFR3A-201ENST00000254624 C14orf37Q86TY3 774 aa24.27■■□□□ 1.48
EFR3A-201ENST00000254624 CARD11Q9BXL7 1154 aa24.27■■□□□ 1.48
EFR3A-201ENST00000254624 KANK1Q14678 1352 aa24.27■■□□□ 1.48
EFR3A-201ENST00000254624 WIZO95785 1651 aa24.26■■□□□ 1.47
EFR3A-201ENST00000254624 VPS8Q8N3P4 1428 aa24.25■■□□□ 1.47
EFR3A-201ENST00000254624 CFAP53Q96M91 514 aa24.24■■□□□ 1.47
EFR3A-201ENST00000254624 NPM2Q86SE8 214 aaKnown RBP24.22■■□□□ 1.47
EFR3A-201ENST00000254624 ARHGAP35Q9NRY4 1499 aa24.22■■□□□ 1.47
EFR3A-201ENST00000254624 KNSTRNQ9Y448 316 aa24.21■■□□□ 1.47
EFR3A-201ENST00000254624 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
EFR3A-201ENST00000254624 FMN1Q68DA7 1419 aa24.21■■□□□ 1.47
EFR3A-201ENST00000254624 CCDC136Q96JN2 1154 aa24.21■■□□□ 1.47
EFR3A-201ENST00000254624 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.47
EFR3A-201ENST00000254624 MIER1Q8N108 512 aa24.19■■□□□ 1.46
EFR3A-201ENST00000254624 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
EFR3A-201ENST00000254624 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
EFR3A-201ENST00000254624 HSP90AA1P07900 732 aaKnown RBP24.15■■□□□ 1.46
EFR3A-201ENST00000254624 TIMELESSQ9UNS1 1208 aa24.14■■□□□ 1.46
EFR3A-201ENST00000254624 MYH16Q9H6N6 1097 aa24.13■■□□□ 1.45
EFR3A-201ENST00000254624 ZBTB7CA1YPR0 619 aa24.12■■□□□ 1.45
EFR3A-201ENST00000254624 POGKQ9P215 609 aa24.12■■□□□ 1.45
EFR3A-201ENST00000254624 HDGFP51858 240 aaKnown RBP24.11■■□□□ 1.45
EFR3A-201ENST00000254624 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
EFR3A-201ENST00000254624 SIN3AQ96ST3 1273 aa24.08■■□□□ 1.45
EFR3A-201ENST00000254624 SETD5Q9C0A6 1442 aa24.08■■□□□ 1.45
EFR3A-201ENST00000254624 HAP1P54257 671 aaPredicted RBP24.03■■□□□ 1.44
EFR3A-201ENST00000254624 EFCAB2Q5VUJ9 269 aa24.02■■□□□ 1.44
EFR3A-201ENST00000254624 TRHP20396 242 aaPredicted RBP24.01■■□□□ 1.43
EFR3A-201ENST00000254624 NUDCQ9Y266 331 aa24.01■■□□□ 1.43
EFR3A-201ENST00000254624 DCAF11Q8TEB1 546 aa23.99■■□□□ 1.43
EFR3A-201ENST00000254624 TMF1P82094 1093 aa23.99■■□□□ 1.43
EFR3A-201ENST00000254624 A0A0G2JS52 829 aa23.97■■□□□ 1.43
EFR3A-201ENST00000254624 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
EFR3A-201ENST00000254624 PLEKHG5O94827 1062 aa23.96■■□□□ 1.43
EFR3A-201ENST00000254624 KANK4Q5T7N3 995 aaPredicted RBP23.95■■□□□ 1.42
EFR3A-201ENST00000254624 ANP32BQ92688 251 aaKnown RBP23.95■■□□□ 1.42
EFR3A-201ENST00000254624 MAPK8IP3Q9UPT6 1336 aa23.95■■□□□ 1.42
EFR3A-201ENST00000254624 ANKRD30AQ9BXX3 1397 aa23.95■■□□□ 1.42
EFR3A-201ENST00000254624 PPM1GO15355 546 aaPredicted RBP23.94■■□□□ 1.42
EFR3A-201ENST00000254624 PKD2Q13563 968 aa23.9■■□□□ 1.42
EFR3A-201ENST00000254624 MLECQ14165 292 aa23.9■■□□□ 1.42
EFR3A-201ENST00000254624 RSPH4AQ5TD94 716 aa23.89■■□□□ 1.42
EFR3A-201ENST00000254624 PNNQ9H307 717 aaKnown RBP23.89■■□□□ 1.42
EFR3A-201ENST00000254624 GGT6Q6P531 493 aa23.89■■□□□ 1.41
EFR3A-201ENST00000254624 CCDC18Q5T9S5 1454 aa23.88■■□□□ 1.41
EFR3A-201ENST00000254624 FHOD3Q2V2M9 1422 aa23.85■■□□□ 1.41
EFR3A-201ENST00000254624 JPH4Q96JJ6 628 aa23.85■■□□□ 1.41
EFR3A-201ENST00000254624 IRX6P78412 446 aaPredicted RBP23.83■■□□□ 1.41
EFR3A-201ENST00000254624 NUP155O75694 1391 aa23.81■■□□□ 1.4
EFR3A-201ENST00000254624 LMOD2Q6P5Q4 547 aa23.81■■□□□ 1.4
EFR3A-201ENST00000254624 CC2D1BQ5T0F9 858 aaKnown RBP23.8■■□□□ 1.4
EFR3A-201ENST00000254624 MPHOSPH9Q99550 1183 aa23.79■■□□□ 1.4
EFR3A-201ENST00000254624 FTSJ3Q8IY81 847 aaKnown RBP23.78■■□□□ 1.4
EFR3A-201ENST00000254624 SRPK2P78362 688 aaKnown RBP23.78■■□□□ 1.4
EFR3A-201ENST00000254624 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
EFR3A-201ENST00000254624 EIF5BO60841 1220 aaKnown RBP23.77■■□□□ 1.4
EFR3A-201ENST00000254624 CHMP4BQ9H444 224 aaKnown RBP23.76■■□□□ 1.39
EFR3A-201ENST00000254624 NEUROD2Q15784 382 aa23.74■■□□□ 1.39
EFR3A-201ENST00000254624 MS4A1P11836 297 aa23.74■■□□□ 1.39
EFR3A-201ENST00000254624 TNNT2P45379 298 aaPredicted RBP23.73■■□□□ 1.39
EFR3A-201ENST00000254624 SPAG9O60271 1321 aaKnown RBP23.73■■□□□ 1.39
EFR3A-201ENST00000254624 LAS1LQ9Y4W2 734 aaKnown RBP23.72■■□□□ 1.39
EFR3A-201ENST00000254624 U2SURPO15042 1029 aaKnown RBP23.72■■□□□ 1.39
EFR3A-201ENST00000254624 HSPA5P11021 654 aaKnown RBP23.71■■□□□ 1.39
EFR3A-201ENST00000254624 NCAPD3P42695 1498 aa23.7■■□□□ 1.39
EFR3A-201ENST00000254624 MORC1Q86VD1 984 aa23.7■■□□□ 1.38
EFR3A-201ENST00000254624 DDRGK1Q96HY6 314 aa23.7■■□□□ 1.38
EFR3A-201ENST00000254624 HNRNPMP52272 730 aaKnown RBP eCLIP23.69■■□□□ 1.38
EFR3A-201ENST00000254624 BECN1Q14457 450 aa23.69■■□□□ 1.38
EFR3A-201ENST00000254624 KIF3BO15066 747 aa23.69■■□□□ 1.38
EFR3A-201ENST00000254624 HDGFL2Q7Z4V5 671 aaPredicted RBP23.69■■□□□ 1.38
EFR3A-201ENST00000254624 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms