RNA–Protein interactions for RNA: ENST00000253458.11

GSE1-201, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GSE1, Length 7,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-201ENST00000253458 NPHP1O15259 732 aa17.47■□□□□ 0.39
GSE1-201ENST00000253458 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.39
GSE1-201ENST00000253458 RGL3Q3MIN7 710 aa17.45■□□□□ 0.38
GSE1-201ENST00000253458 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
GSE1-201ENST00000253458 WDR43Q15061 677 aaKnown RBP eCLIP17.41■□□□□ 0.384e-6■■■□□ 15.6
GSE1-201ENST00000253458 TONSLQ96HA7 1378 aa17.41■□□□□ 0.38
GSE1-201ENST00000253458 SOX12O15370 315 aa17.4■□□□□ 0.38
GSE1-201ENST00000253458 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.38
GSE1-201ENST00000253458 MLECQ14165 292 aa17.37■□□□□ 0.37
GSE1-201ENST00000253458 UPF2Q9HAU5 1272 aaKnown RBP17.36■□□□□ 0.37
GSE1-201ENST00000253458 RRP7BPQ9NSQ0 103 aa17.36■□□□□ 0.37
GSE1-201ENST00000253458 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
GSE1-201ENST00000253458 CSRNP3Q8WYN3 585 aa17.34■□□□□ 0.37
GSE1-201ENST00000253458 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
GSE1-201ENST00000253458 TSPY4P0CV99 314 aa17.28■□□□□ 0.36
GSE1-201ENST00000253458 TSPY10P0CW01 314 aa17.28■□□□□ 0.36
GSE1-201ENST00000253458 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
GSE1-201ENST00000253458 SCRIBQ14160 1630 aa17.24■□□□□ 0.35
GSE1-201ENST00000253458 MYH16Q9H6N6 1097 aa17.23■□□□□ 0.35
GSE1-201ENST00000253458 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
GSE1-201ENST00000253458 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
GSE1-201ENST00000253458 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.21■□□□□ 0.35
GSE1-201ENST00000253458 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
GSE1-201ENST00000253458 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.342e-7■□□□□ 9.6
GSE1-201ENST00000253458 NAP1L2Q9ULW6 460 aaPredicted RBP17.18■□□□□ 0.34
GSE1-201ENST00000253458 CLSTN1O94985 981 aa17.17■□□□□ 0.34
GSE1-201ENST00000253458 PRM3Q9NNZ6 103 aa17.17■□□□□ 0.34
GSE1-201ENST00000253458 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
GSE1-201ENST00000253458 FBXO3Q9UK99 471 aa17.12■□□□□ 0.33
GSE1-201ENST00000253458 ZNF330Q9Y3S2 320 aaPredicted RBP17.11■□□□□ 0.33
GSE1-201ENST00000253458 ACIN1Q9UKV3 1341 aaKnown RBP17.11■□□□□ 0.33
GSE1-201ENST00000253458 MTUS2Q5JR59 1369 aa17.09■□□□□ 0.33
GSE1-201ENST00000253458 POGKQ9P215 609 aa17.08■□□□□ 0.32
GSE1-201ENST00000253458 ANO8Q9HCE9 1232 aaPredicted RBP17.08■□□□□ 0.32
GSE1-201ENST00000253458 PLCB2Q00722 1185 aa17.06■□□□□ 0.32
GSE1-201ENST00000253458 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
GSE1-201ENST00000253458 GOLGA2Q08379 1002 aa17.04■□□□□ 0.32
GSE1-201ENST00000253458 CC2D1BQ5T0F9 858 aaKnown RBP17.04■□□□□ 0.32
GSE1-201ENST00000253458 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
GSE1-201ENST00000253458 OS9Q13438 667 aaPredicted RBP17.04■□□□□ 0.32
GSE1-201ENST00000253458 FRAT1Q92837 279 aaPredicted RBP17.03■□□□□ 0.32
GSE1-201ENST00000253458 PAK3O75914 559 aaPredicted RBP17■□□□□ 0.31
GSE1-201ENST00000253458 FTSJ3Q8IY81 847 aaKnown RBP17■□□□□ 0.31
GSE1-201ENST00000253458 STK26Q9P289 416 aa17■□□□□ 0.31
GSE1-201ENST00000253458 PLEKHD1A6NEE1 506 aa16.98■□□□□ 0.31
GSE1-201ENST00000253458 APBB1O00213 710 aa16.96■□□□□ 0.31
GSE1-201ENST00000253458 ZRSR1Q15695 479 aaKnown RBP16.95■□□□□ 0.3
GSE1-201ENST00000253458 FGD1P98174 961 aa16.95■□□□□ 0.3
GSE1-201ENST00000253458 SPRYD3Q8NCJ5 442 aa16.95■□□□□ 0.3
GSE1-201ENST00000253458 MIER1Q8N108 512 aa16.94■□□□□ 0.3
GSE1-201ENST00000253458 RGS3P49796 1198 aa16.94■□□□□ 0.3
GSE1-201ENST00000253458 DNTTIP2Q5QJE6 756 aaKnown RBP16.93■□□□□ 0.3
GSE1-201ENST00000253458 PDE4CQ08493 712 aa16.92■□□□□ 0.3
GSE1-201ENST00000253458 KNSTRNQ9Y448 316 aa16.92■□□□□ 0.3
GSE1-201ENST00000253458 PTMAP06454 111 aaKnown RBP16.91■□□□□ 0.3
GSE1-201ENST00000253458 KCNJ4P48050 445 aa16.91■□□□□ 0.3
GSE1-201ENST00000253458 NUTM2DQ5VT03 806 aaPredicted RBP16.9■□□□□ 0.3
GSE1-201ENST00000253458 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.3
GSE1-201ENST00000253458 EIF4G2P78344 907 aaKnown RBP eCLIP16.89■□□□□ 0.291e-6■■■□□ 15
GSE1-201ENST00000253458 CARD11Q9BXL7 1154 aa16.89■□□□□ 0.29
GSE1-201ENST00000253458 CFAP53Q96M91 514 aa16.88■□□□□ 0.29
GSE1-201ENST00000253458 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
GSE1-201ENST00000253458 CFDP1Q9UEE9 299 aaPredicted RBP16.88■□□□□ 0.29
GSE1-201ENST00000253458 NUTM2FA1L443 756 aa16.88■□□□□ 0.29
GSE1-201ENST00000253458 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
GSE1-201ENST00000253458 SRPK2P78362 688 aaKnown RBP16.87■□□□□ 0.29
GSE1-201ENST00000253458 GGT6Q6P531 493 aa16.86■□□□□ 0.29
GSE1-201ENST00000253458 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
GSE1-201ENST00000253458 ERICH6BQ5W0A0 696 aa16.84■□□□□ 0.29
GSE1-201ENST00000253458 TRIM44Q96DX7 344 aaPredicted RBP16.84■□□□□ 0.29
GSE1-201ENST00000253458 ARID3AQ99856 593 aa16.82■□□□□ 0.28
GSE1-201ENST00000253458 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
GSE1-201ENST00000253458 CASC1Q6TDU7 716 aa16.82■□□□□ 0.28
GSE1-201ENST00000253458 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
GSE1-201ENST00000253458 ZCCHC6Q5VYS8 1495 aaKnown RBP16.78■□□□□ 0.28
GSE1-201ENST00000253458 CHMP3Q9Y3E7 222 aa16.76■□□□□ 0.27
GSE1-201ENST00000253458 FOXD1Q16676 465 aa16.75■□□□□ 0.27
GSE1-201ENST00000253458 BECN1Q14457 450 aa16.75■□□□□ 0.27
GSE1-201ENST00000253458 DCAF11Q8TEB1 546 aa16.74■□□□□ 0.27
GSE1-201ENST00000253458 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
GSE1-201ENST00000253458 LTV1Q96GA3 475 aaPredicted RBP16.73■□□□□ 0.27
GSE1-201ENST00000253458 MSH5O43196 834 aa16.73■□□□□ 0.27
GSE1-201ENST00000253458 GOLGA6L22H0YM25 854 aa16.72■□□□□ 0.27
GSE1-201ENST00000253458 NAP1L5Q96NT1 182 aaPredicted RBP16.72■□□□□ 0.27
GSE1-201ENST00000253458 HSP90AB1P08238 724 aaKnown RBP16.72■□□□□ 0.27
GSE1-201ENST00000253458 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
GSE1-201ENST00000253458 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.27
GSE1-201ENST00000253458 B4GALNT3Q6L9W6 998 aa16.7■□□□□ 0.26
GSE1-201ENST00000253458 G3V3G9 751 aa16.69■□□□□ 0.26
GSE1-201ENST00000253458 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
GSE1-201ENST00000253458 WWC1Q8IX03 1113 aa16.69■□□□□ 0.26
GSE1-201ENST00000253458 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
GSE1-201ENST00000253458 PHF23Q9BUL5 403 aaPredicted RBP16.67■□□□□ 0.26
GSE1-201ENST00000253458 KRI1Q8N9T8 703 aaKnown RBP16.66■□□□□ 0.26
GSE1-201ENST00000253458 RTF1Q92541 710 aaKnown RBP16.66■□□□□ 0.26
GSE1-201ENST00000253458 GNL2Q13823 731 aaKnown RBP16.65■□□□□ 0.26
GSE1-201ENST00000253458 CLIP1P30622 1438 aa16.63■□□□□ 0.25
GSE1-201ENST00000253458 CREBRFQ8IUR6 639 aa16.63■□□□□ 0.25
GSE1-201ENST00000253458 MORC1Q86VD1 984 aa16.61■□□□□ 0.25
GSE1-201ENST00000253458 TMX4Q9H1E5 349 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms