RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 TULP1O00294 542 aaPredicted RBP18.39■□□□□ 0.53
COLGALT1-201ENST00000252599 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
COLGALT1-201ENST00000252599 NOP58Q9Y2X3 529 aaKnown RBP18.36■□□□□ 0.53
COLGALT1-201ENST00000252599 AAMPQ13685 434 aa18.36■□□□□ 0.53
COLGALT1-201ENST00000252599 POLR3GLQ9BT43 218 aa18.36■□□□□ 0.53
COLGALT1-201ENST00000252599 ZBTB47Q9UFB7 747 aaPredicted RBP18.32■□□□□ 0.52
COLGALT1-201ENST00000252599 ANP32AP39687 249 aaKnown RBP18.32■□□□□ 0.52
COLGALT1-201ENST00000252599 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
COLGALT1-201ENST00000252599 HSP90AA1P07900 732 aaKnown RBP18.27■□□□□ 0.52
COLGALT1-201ENST00000252599 USP35Q9P2H5 1018 aa18.26■□□□□ 0.51
COLGALT1-201ENST00000252599 ARID3CA6NKF2 412 aa18.25■□□□□ 0.51
COLGALT1-201ENST00000252599 ZNF326Q5BKZ1 582 aaKnown RBP18.25■□□□□ 0.51
COLGALT1-201ENST00000252599 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
COLGALT1-201ENST00000252599 BBXQ8WY36 941 aaPredicted RBP18.23■□□□□ 0.51
COLGALT1-201ENST00000252599 CHMP4BQ9H444 224 aaKnown RBP18.22■□□□□ 0.51
COLGALT1-201ENST00000252599 BRPF3Q9ULD4 1205 aa18.22■□□□□ 0.51
COLGALT1-201ENST00000252599 IRX6P78412 446 aaPredicted RBP18.22■□□□□ 0.51
COLGALT1-201ENST00000252599 SOGA1O94964 1423 aa18.21■□□□□ 0.51
COLGALT1-201ENST00000252599 ARXQ96QS3 562 aa18.2■□□□□ 0.5
COLGALT1-201ENST00000252599 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
COLGALT1-201ENST00000252599 CNGB1Q14028 1251 aaPredicted RBP18.2■□□□□ 0.5
COLGALT1-201ENST00000252599 C14orf37Q86TY3 774 aa18.2■□□□□ 0.5
COLGALT1-201ENST00000252599 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
COLGALT1-201ENST00000252599 CHMP4AQ9BY43 222 aa18.17■□□□□ 0.5
COLGALT1-201ENST00000252599 CEP162Q5TB80 1403 aa18.17■□□□□ 0.5
COLGALT1-201ENST00000252599 NAP1L2Q9ULW6 460 aaPredicted RBP18.16■□□□□ 0.5
COLGALT1-201ENST00000252599 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
COLGALT1-201ENST00000252599 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
COLGALT1-201ENST00000252599 FANCIQ9NVI1 1328 aa18.13■□□□□ 0.49
COLGALT1-201ENST00000252599 CCDC88BA6NC98 1476 aa18.13■□□□□ 0.49
COLGALT1-201ENST00000252599 WIZO95785 1651 aa18.13■□□□□ 0.49
COLGALT1-201ENST00000252599 CDK11BP21127 795 aaKnown RBP18.11■□□□□ 0.49
COLGALT1-201ENST00000252599 PLCD3Q8N3E9 789 aa18.07■□□□□ 0.48
COLGALT1-201ENST00000252599 NACADO15069 1562 aa18.05■□□□□ 0.48
COLGALT1-201ENST00000252599 ARID3AQ99856 593 aa18.05■□□□□ 0.48
COLGALT1-201ENST00000252599 HOMEZQ8IX15 550 aa18.03■□□□□ 0.48
COLGALT1-201ENST00000252599 BRD2P25440 801 aaKnown RBP18.02■□□□□ 0.48
COLGALT1-201ENST00000252599 RUSC2Q8N2Y8 1516 aa18.02■□□□□ 0.48
COLGALT1-201ENST00000252599 RGS3P49796 1198 aa17.99■□□□□ 0.47
COLGALT1-201ENST00000252599 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
COLGALT1-201ENST00000252599 HIRIP3Q9BW71 556 aaPredicted RBP17.97■□□□□ 0.47
COLGALT1-201ENST00000252599 PNNQ9H307 717 aaKnown RBP17.97■□□□□ 0.47
COLGALT1-201ENST00000252599 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
COLGALT1-201ENST00000252599 TNNT2P45379 298 aaPredicted RBP17.95■□□□□ 0.46
COLGALT1-201ENST00000252599 FBLN2P98095 1184 aa17.95■□□□□ 0.46
COLGALT1-201ENST00000252599 NCLP19338 710 aaKnown RBP17.94■□□□□ 0.46
COLGALT1-201ENST00000252599 CLIP1P30622 1438 aa17.94■□□□□ 0.46
COLGALT1-201ENST00000252599 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
COLGALT1-201ENST00000252599 TNIKQ9UKE5 1360 aa17.91■□□□□ 0.46
COLGALT1-201ENST00000252599 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.46
COLGALT1-201ENST00000252599 RRP9O43818 475 aaKnown RBP17.88■□□□□ 0.45
COLGALT1-201ENST00000252599 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
COLGALT1-201ENST00000252599 GOLGA3Q08378 1498 aa17.81■□□□□ 0.44
COLGALT1-201ENST00000252599 DDX10Q13206 875 aaKnown RBP17.81■□□□□ 0.44
COLGALT1-201ENST00000252599 KANK4Q5T7N3 995 aaPredicted RBP17.81■□□□□ 0.44
COLGALT1-201ENST00000252599 APPP05067 770 aa17.8■□□□□ 0.44
COLGALT1-201ENST00000252599 BAZ1BQ9UIG0 1483 aaKnown RBP17.79■□□□□ 0.44
COLGALT1-201ENST00000252599 PPM1GO15355 546 aaPredicted RBP17.78■□□□□ 0.44
COLGALT1-201ENST00000252599 ANP32BQ92688 251 aaKnown RBP17.78■□□□□ 0.44
COLGALT1-201ENST00000252599 PATL2C9JE40 543 aaKnown RBP17.77■□□□□ 0.44
COLGALT1-201ENST00000252599 GSE1Q14687 1217 aa17.77■□□□□ 0.44
COLGALT1-201ENST00000252599 VGLL3A8MV65 326 aa17.76■□□□□ 0.43
COLGALT1-201ENST00000252599 ZHX1Q9UKY1 873 aaPredicted RBP17.75■□□□□ 0.43
COLGALT1-201ENST00000252599 DNTTIP2Q5QJE6 756 aaKnown RBP17.74■□□□□ 0.43
COLGALT1-201ENST00000252599 ZFP91Q96JP5 570 aaPredicted RBP17.73■□□□□ 0.43
COLGALT1-201ENST00000252599 IPO9Q96P70 1041 aaKnown RBP17.73■□□□□ 0.43
COLGALT1-201ENST00000252599 CHIC2Q9UKJ5 165 aa17.71■□□□□ 0.43
COLGALT1-201ENST00000252599 B4GALNT3Q6L9W6 998 aa17.7■□□□□ 0.42
COLGALT1-201ENST00000252599 FAM43AQ8N2R8 423 aa17.7■□□□□ 0.42
COLGALT1-201ENST00000252599 SIN3AQ96ST3 1273 aa17.69■□□□□ 0.42
COLGALT1-201ENST00000252599 E9PSI1 815 aa17.68■□□□□ 0.42
COLGALT1-201ENST00000252599 C11orf95C9JLR9 678 aaPredicted RBP17.67■□□□□ 0.42
COLGALT1-201ENST00000252599 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
COLGALT1-201ENST00000252599 EEA1Q15075 1411 aa17.64■□□□□ 0.41
COLGALT1-201ENST00000252599 KCNH8Q96L42 1107 aa17.63■□□□□ 0.41
COLGALT1-201ENST00000252599 PRDM10Q9NQV6 1147 aa17.63■□□□□ 0.41
COLGALT1-201ENST00000252599 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
COLGALT1-201ENST00000252599 IPO4Q8TEX9 1081 aaKnown RBP17.63■□□□□ 0.41
COLGALT1-201ENST00000252599 ZNF777Q9ULD5 760 aaPredicted RBP17.63■□□□□ 0.41
COLGALT1-201ENST00000252599 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
COLGALT1-201ENST00000252599 AEBP1Q8IUX7 1158 aa17.62■□□□□ 0.41
COLGALT1-201ENST00000252599 RAPGEF2Q9Y4G8 1499 aa17.61■□□□□ 0.41
COLGALT1-201ENST00000252599 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
COLGALT1-201ENST00000252599 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
COLGALT1-201ENST00000252599 FRAT1Q92837 279 aaPredicted RBP17.59■□□□□ 0.41
COLGALT1-201ENST00000252599 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.41
COLGALT1-201ENST00000252599 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
COLGALT1-201ENST00000252599 CNPY4Q8N129 248 aa17.58■□□□□ 0.4
COLGALT1-201ENST00000252599 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
COLGALT1-201ENST00000252599 ANP32CO43423 234 aa17.54■□□□□ 0.4
COLGALT1-201ENST00000252599 TRIM44Q96DX7 344 aaPredicted RBP17.54■□□□□ 0.4
COLGALT1-201ENST00000252599 FAM13BQ9NYF5 915 aa17.54■□□□□ 0.4
COLGALT1-201ENST00000252599 HNRNPUQ00839 825 aaKnown RBP eCLIP17.53■□□□□ 0.4
COLGALT1-201ENST00000252599 SECISBP2LQ93073 1101 aaKnown RBP17.53■□□□□ 0.4
COLGALT1-201ENST00000252599 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
COLGALT1-201ENST00000252599 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
COLGALT1-201ENST00000252599 RSPH4AQ5TD94 716 aa17.52■□□□□ 0.39
COLGALT1-201ENST00000252599 PPP4R2Q9NY27 417 aa17.51■□□□□ 0.39
COLGALT1-201ENST00000252599 RRP7BPQ9NSQ0 103 aa17.49■□□□□ 0.39
COLGALT1-201ENST00000252599 ATAD2BQ9ULI0 1458 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms