RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 CCDC9Q9Y3X0 531 aaKnown RBP6.58□□□□□ -1.36
CDH9-201ENST00000231021 BBXQ8WY36 941 aaPredicted RBP6.58□□□□□ -1.36
CDH9-201ENST00000231021 POLR3GLQ9BT43 218 aa6.57□□□□□ -1.36
CDH9-201ENST00000231021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.56□□□□□ -1.36
CDH9-201ENST00000231021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDH9-201ENST00000231021 RGL2O15211 777 aa6.55□□□□□ -1.36
CDH9-201ENST00000231021 SPRYD3Q8NCJ5 442 aa6.55□□□□□ -1.36
CDH9-201ENST00000231021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.54□□□□□ -1.36
CDH9-201ENST00000231021 HNRNPUL2Q1KMD3 747 aaKnown RBP6.54□□□□□ -1.36
CDH9-201ENST00000231021 SHROOM4Q9ULL8 1493 aa6.54□□□□□ -1.36
CDH9-201ENST00000231021 CACNB1Q02641 598 aaPredicted RBP6.53□□□□□ -1.36
CDH9-201ENST00000231021 BCL11BQ9C0K0 894 aaPredicted RBP6.53□□□□□ -1.36
CDH9-201ENST00000231021 MTMR7Q9Y216 660 aa6.53□□□□□ -1.36
CDH9-201ENST00000231021 NEUROD2Q15784 382 aa6.52□□□□□ -1.37
CDH9-201ENST00000231021 RBM25P49756 843 aaKnown RBP6.51□□□□□ -1.37
CDH9-201ENST00000231021 RAD21O60216 631 aa6.51□□□□□ -1.37
CDH9-201ENST00000231021 VASPP50552 380 aaPredicted RBP6.5□□□□□ -1.37
CDH9-201ENST00000231021 ATF5Q9Y2D1 282 aaPredicted RBP6.5□□□□□ -1.37
CDH9-201ENST00000231021 BRD2P25440 801 aaKnown RBP6.5□□□□□ -1.37
CDH9-201ENST00000231021 KCTD17Q8N5Z5 321 aa6.5□□□□□ -1.37
CDH9-201ENST00000231021 CCDC136Q96JN2 1154 aa6.49□□□□□ -1.37
CDH9-201ENST00000231021 ZBTB7CA1YPR0 619 aa6.48□□□□□ -1.37
CDH9-201ENST00000231021 SLC4A2P04920 1241 aa6.48□□□□□ -1.37
CDH9-201ENST00000231021 TRIM41Q8WV44 630 aa6.48□□□□□ -1.37
CDH9-201ENST00000231021 U3KPZ7 1027 aaPredicted RBP6.48□□□□□ -1.37
CDH9-201ENST00000231021 APBB1O00213 710 aa6.48□□□□□ -1.37
CDH9-201ENST00000231021 HSP90B1P14625 803 aaKnown RBP6.46□□□□□ -1.37
CDH9-201ENST00000231021 BRPF3Q9ULD4 1205 aa6.46□□□□□ -1.38
CDH9-201ENST00000231021 ZMYND15Q9H091 742 aa6.46□□□□□ -1.38
CDH9-201ENST00000231021 CHGAP10645 457 aaKnown RBP6.45□□□□□ -1.38
CDH9-201ENST00000231021 ECM2O94769 699 aaPredicted RBP6.44□□□□□ -1.38
CDH9-201ENST00000231021 ZNF692Q9BU19 519 aaPredicted RBP6.44□□□□□ -1.38
CDH9-201ENST00000231021 AEBP1Q8IUX7 1158 aa6.44□□□□□ -1.38
CDH9-201ENST00000231021 A0A0U1RQG5 324 aaPredicted RBP6.44□□□□□ -1.38
CDH9-201ENST00000231021 MYCNP04198 464 aaPredicted RBP6.43□□□□□ -1.38
CDH9-201ENST00000231021 SLC24A3Q9HC58 644 aa6.43□□□□□ -1.38
CDH9-201ENST00000231021 RGS22Q8NE09 1264 aa6.42□□□□□ -1.38
CDH9-201ENST00000231021 USP35Q9P2H5 1018 aa6.42□□□□□ -1.38
CDH9-201ENST00000231021 RSPH6AQ9H0K4 717 aa6.41□□□□□ -1.38
CDH9-201ENST00000231021 GPBP1L1Q9HC44 474 aaPredicted RBP6.41□□□□□ -1.38
CDH9-201ENST00000231021 TMED8Q6PL24 325 aaPredicted RBP6.4□□□□□ -1.38
CDH9-201ENST00000231021 LMOD2Q6P5Q4 547 aa6.4□□□□□ -1.39
CDH9-201ENST00000231021 ZFP91Q96JP5 570 aaPredicted RBP6.39□□□□□ -1.39
CDH9-201ENST00000231021 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
CDH9-201ENST00000231021 ATXN8OSP0DMR3 200 aa6.39□□□□□ -1.39
CDH9-201ENST00000231021 TAF7LQ5H9L4 462 aa6.39□□□□□ -1.39
CDH9-201ENST00000231021 PUS7Q96PZ0 661 aaKnown RBP6.38□□□□□ -1.39
CDH9-201ENST00000231021 CCDC82Q8N4S0 544 aa6.38□□□□□ -1.39
CDH9-201ENST00000231021 CUX2O14529 1486 aa6.37□□□□□ -1.39
CDH9-201ENST00000231021 IL27Q8NEV9 243 aa6.36□□□□□ -1.39
CDH9-201ENST00000231021 ZNF219Q9P2Y4 722 aaPredicted RBP6.36□□□□□ -1.39
CDH9-201ENST00000231021 MKRN3Q13064 507 aaKnown RBP6.36□□□□□ -1.39
CDH9-201ENST00000231021 FAM177A1Q8N128 213 aaPredicted RBP6.35□□□□□ -1.39
CDH9-201ENST00000231021 ZNF526Q8TF50 670 aaPredicted RBP6.34□□□□□ -1.4
CDH9-201ENST00000231021 ZNF592Q92610 1267 aa6.33□□□□□ -1.4
CDH9-201ENST00000231021 NKX1-1Q15270 411 aaPredicted RBP6.32□□□□□ -1.4
CDH9-201ENST00000231021 MFAP1P55081 439 aaKnown RBP6.31□□□□□ -1.4
CDH9-201ENST00000231021 GZF1Q9H116 711 aaPredicted RBP6.3□□□□□ -1.4
CDH9-201ENST00000231021 PKNOX2Q96KN3 472 aa6.3□□□□□ -1.4
CDH9-201ENST00000231021 PPM1GO15355 546 aaPredicted RBP6.29□□□□□ -1.4
CDH9-201ENST00000231021 DSG3P32926 999 aa6.29□□□□□ -1.4
CDH9-201ENST00000231021 CLUAP1Q96AJ1 413 aa6.28□□□□□ -1.4
CDH9-201ENST00000231021 CERS3Q8IU89 383 aa6.27□□□□□ -1.41
CDH9-201ENST00000231021 ZC3H15Q8WU90 426 aaKnown RBP6.27□□□□□ -1.41
CDH9-201ENST00000231021 NEFLP07196 543 aa6.26□□□□□ -1.41
CDH9-201ENST00000231021 KDM4AO75164 1064 aa6.26□□□□□ -1.41
CDH9-201ENST00000231021 KCNV2Q8TDN2 545 aa6.26□□□□□ -1.41
CDH9-201ENST00000231021 ZEB1P37275 1124 aaPredicted RBP6.25□□□□□ -1.41
CDH9-201ENST00000231021 PRDM10Q9NQV6 1147 aa6.25□□□□□ -1.41
CDH9-201ENST00000231021 ZNF316A6NFI3 1004 aaPredicted RBP6.25□□□□□ -1.41
CDH9-201ENST00000231021 TMCO4Q5TGY1 634 aa6.24□□□□□ -1.41
CDH9-201ENST00000231021 HMGB1P09429 215 aaKnown RBP6.24□□□□□ -1.41
CDH9-201ENST00000231021 IRF5Q13568 498 aa6.24□□□□□ -1.41
CDH9-201ENST00000231021 SPDYE4A6NLX3 237 aa6.23□□□□□ -1.41
CDH9-201ENST00000231021 FGD1P98174 961 aa6.23□□□□□ -1.41
CDH9-201ENST00000231021 ZBTB12Q9Y330 459 aaPredicted RBP6.23□□□□□ -1.41
CDH9-201ENST00000231021 CAPN15O75808 1086 aa6.22□□□□□ -1.41
CDH9-201ENST00000231021 CARNS1A5YM72 827 aa6.22□□□□□ -1.41
CDH9-201ENST00000231021 SPINK5Q9NQ38 1064 aaPredicted RBP6.21□□□□□ -1.42
CDH9-201ENST00000231021 DCAF1Q9Y4B6 1507 aa6.21□□□□□ -1.42
CDH9-201ENST00000231021 HS6ST3Q8IZP7 471 aa6.2□□□□□ -1.42
CDH9-201ENST00000231021 RETREG2Q8NC44 543 aa6.2□□□□□ -1.42
CDH9-201ENST00000231021 PRDM16Q9HAZ2 1276 aa6.2□□□□□ -1.42
CDH9-201ENST00000231021 FAM117AQ9C073 453 aa6.19□□□□□ -1.42
CDH9-201ENST00000231021 WDR70Q9NW82 654 aa6.19□□□□□ -1.42
CDH9-201ENST00000231021 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.19□□□□□ -1.42
CDH9-201ENST00000231021 GTPBP6O43824 516 aaPredicted RBP6.18□□□□□ -1.42
CDH9-201ENST00000231021 RNF25Q96BH1 459 aaPredicted RBP6.18□□□□□ -1.42
CDH9-201ENST00000231021 ARID4BQ4LE39 1312 aaPredicted RBP6.18□□□□□ -1.42
CDH9-201ENST00000231021 ZNF777Q9ULD5 760 aaPredicted RBP6.17□□□□□ -1.42
CDH9-201ENST00000231021 E9PSI1 815 aa6.16□□□□□ -1.42
CDH9-201ENST00000231021 SMARCA5O60264 1052 aaPredicted RBP6.16□□□□□ -1.42
CDH9-201ENST00000231021 UNCXA6NJT0 531 aa6.15□□□□□ -1.43
CDH9-201ENST00000231021 SEMA3EO15041 775 aa6.14□□□□□ -1.43
CDH9-201ENST00000231021 CCDC180Q9P1Z9 1646 aa6.14□□□□□ -1.43
CDH9-201ENST00000231021 CADPS2Q86UW7 1296 aa6.13□□□□□ -1.43
CDH9-201ENST00000231021 FBXW7Q969H0 707 aa6.13□□□□□ -1.43
CDH9-201ENST00000231021 MKRN4PQ13434 485 aaPredicted RBP6.12□□□□□ -1.43
CDH9-201ENST00000231021 RBM42Q9BTD8 480 aaKnown RBP6.12□□□□□ -1.43
CDH9-201ENST00000231021 ANO8Q9HCE9 1232 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms