RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 CCDC9Q9Y3X0 531 aaKnown RBP6.58□□□□□ -1.36
CDH9-201ENST00000231021 BBXQ8WY36 941 aaPredicted RBP6.58□□□□□ -1.36
CDH9-201ENST00000231021 POLR3GLQ9BT43 218 aa6.57□□□□□ -1.36
CDH9-201ENST00000231021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.56□□□□□ -1.36
CDH9-201ENST00000231021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDH9-201ENST00000231021 RGL2O15211 777 aa6.55□□□□□ -1.36
CDH9-201ENST00000231021 SPRYD3Q8NCJ5 442 aa6.55□□□□□ -1.36
CDH9-201ENST00000231021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.54□□□□□ -1.36
CDH9-201ENST00000231021 HNRNPUL2Q1KMD3 747 aaKnown RBP6.54□□□□□ -1.36
CDH9-201ENST00000231021 SHROOM4Q9ULL8 1493 aa6.54□□□□□ -1.36
CDH9-201ENST00000231021 CACNB1Q02641 598 aaPredicted RBP6.53□□□□□ -1.36
CDH9-201ENST00000231021 BCL11BQ9C0K0 894 aaPredicted RBP6.53□□□□□ -1.36
CDH9-201ENST00000231021 MTMR7Q9Y216 660 aa6.53□□□□□ -1.36
CDH9-201ENST00000231021 NEUROD2Q15784 382 aa6.52□□□□□ -1.37
CDH9-201ENST00000231021 RBM25P49756 843 aaKnown RBP6.51□□□□□ -1.37
CDH9-201ENST00000231021 RAD21O60216 631 aa6.51□□□□□ -1.37
CDH9-201ENST00000231021 VASPP50552 380 aaPredicted RBP6.5□□□□□ -1.37
CDH9-201ENST00000231021 ATF5Q9Y2D1 282 aaPredicted RBP6.5□□□□□ -1.37
CDH9-201ENST00000231021 BRD2P25440 801 aaKnown RBP6.5□□□□□ -1.37
CDH9-201ENST00000231021 KCTD17Q8N5Z5 321 aa6.5□□□□□ -1.37
CDH9-201ENST00000231021 CCDC136Q96JN2 1154 aa6.49□□□□□ -1.37
CDH9-201ENST00000231021 ZBTB7CA1YPR0 619 aa6.48□□□□□ -1.37
CDH9-201ENST00000231021 SLC4A2P04920 1241 aa6.48□□□□□ -1.37
CDH9-201ENST00000231021 TRIM41Q8WV44 630 aa6.48□□□□□ -1.37
CDH9-201ENST00000231021 U3KPZ7 1027 aaPredicted RBP6.48□□□□□ -1.37
CDH9-201ENST00000231021 APBB1O00213 710 aa6.48□□□□□ -1.37
CDH9-201ENST00000231021 HSP90B1P14625 803 aaKnown RBP6.46□□□□□ -1.37
CDH9-201ENST00000231021 BRPF3Q9ULD4 1205 aa6.46□□□□□ -1.38
CDH9-201ENST00000231021 ZMYND15Q9H091 742 aa6.46□□□□□ -1.38
CDH9-201ENST00000231021 CHGAP10645 457 aaKnown RBP6.45□□□□□ -1.38
CDH9-201ENST00000231021 ECM2O94769 699 aaPredicted RBP6.44□□□□□ -1.38
CDH9-201ENST00000231021 ZNF692Q9BU19 519 aaPredicted RBP6.44□□□□□ -1.38
CDH9-201ENST00000231021 AEBP1Q8IUX7 1158 aa6.44□□□□□ -1.38
CDH9-201ENST00000231021 A0A0U1RQG5 324 aaPredicted RBP6.44□□□□□ -1.38
CDH9-201ENST00000231021 MYCNP04198 464 aaPredicted RBP6.43□□□□□ -1.38
CDH9-201ENST00000231021 SLC24A3Q9HC58 644 aa6.43□□□□□ -1.38
CDH9-201ENST00000231021 RGS22Q8NE09 1264 aa6.42□□□□□ -1.38
CDH9-201ENST00000231021 USP35Q9P2H5 1018 aa6.42□□□□□ -1.38
CDH9-201ENST00000231021 RSPH6AQ9H0K4 717 aa6.41□□□□□ -1.38
CDH9-201ENST00000231021 GPBP1L1Q9HC44 474 aaPredicted RBP6.41□□□□□ -1.38
CDH9-201ENST00000231021 TMED8Q6PL24 325 aaPredicted RBP6.4□□□□□ -1.38
CDH9-201ENST00000231021 LMOD2Q6P5Q4 547 aa6.4□□□□□ -1.39
CDH9-201ENST00000231021 ZFP91Q96JP5 570 aaPredicted RBP6.39□□□□□ -1.39
CDH9-201ENST00000231021 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
CDH9-201ENST00000231021 ATXN8OSP0DMR3 200 aa6.39□□□□□ -1.39
CDH9-201ENST00000231021 TAF7LQ5H9L4 462 aa6.39□□□□□ -1.39
CDH9-201ENST00000231021 PUS7Q96PZ0 661 aaKnown RBP6.38□□□□□ -1.39
CDH9-201ENST00000231021 CCDC82Q8N4S0 544 aa6.38□□□□□ -1.39
CDH9-201ENST00000231021 CUX2O14529 1486 aa6.37□□□□□ -1.39
CDH9-201ENST00000231021 IL27Q8NEV9 243 aa6.36□□□□□ -1.39
CDH9-201ENST00000231021 ZNF219Q9P2Y4 722 aaPredicted RBP6.36□□□□□ -1.39
CDH9-201ENST00000231021 MKRN3Q13064 507 aaKnown RBP6.36□□□□□ -1.39
CDH9-201ENST00000231021 FAM177A1Q8N128 213 aaPredicted RBP6.35□□□□□ -1.39
CDH9-201ENST00000231021 ZNF526Q8TF50 670 aaPredicted RBP6.34□□□□□ -1.4
CDH9-201ENST00000231021 ZNF592Q92610 1267 aa6.33□□□□□ -1.4
CDH9-201ENST00000231021 NKX1-1Q15270 411 aaPredicted RBP6.32□□□□□ -1.4
CDH9-201ENST00000231021 MFAP1P55081 439 aaKnown RBP6.31□□□□□ -1.4
CDH9-201ENST00000231021 GZF1Q9H116 711 aaPredicted RBP6.3□□□□□ -1.4
CDH9-201ENST00000231021 PKNOX2Q96KN3 472 aa6.3□□□□□ -1.4
CDH9-201ENST00000231021 PPM1GO15355 546 aaPredicted RBP6.29□□□□□ -1.4
CDH9-201ENST00000231021 DSG3P32926 999 aa6.29□□□□□ -1.4
CDH9-201ENST00000231021 CLUAP1Q96AJ1 413 aa6.28□□□□□ -1.4
CDH9-201ENST00000231021 CERS3Q8IU89 383 aa6.27□□□□□ -1.41
CDH9-201ENST00000231021 ZC3H15Q8WU90 426 aaKnown RBP6.27□□□□□ -1.41
CDH9-201ENST00000231021 NEFLP07196 543 aa6.26□□□□□ -1.41
CDH9-201ENST00000231021 KDM4AO75164 1064 aa6.26□□□□□ -1.41
CDH9-201ENST00000231021 KCNV2Q8TDN2 545 aa6.26□□□□□ -1.41
CDH9-201ENST00000231021 ZEB1P37275 1124 aaPredicted RBP6.25□□□□□ -1.41
CDH9-201ENST00000231021 PRDM10Q9NQV6 1147 aa6.25□□□□□ -1.41
CDH9-201ENST00000231021 ZNF316A6NFI3 1004 aaPredicted RBP6.25□□□□□ -1.41
CDH9-201ENST00000231021 TMCO4Q5TGY1 634 aa6.24□□□□□ -1.41
CDH9-201ENST00000231021 HMGB1P09429 215 aaKnown RBP6.24□□□□□ -1.41
CDH9-201ENST00000231021 IRF5Q13568 498 aa6.24□□□□□ -1.41
CDH9-201ENST00000231021 SPDYE4A6NLX3 237 aa6.23□□□□□ -1.41
CDH9-201ENST00000231021 FGD1P98174 961 aa6.23□□□□□ -1.41
CDH9-201ENST00000231021 ZBTB12Q9Y330 459 aaPredicted RBP6.23□□□□□ -1.41
CDH9-201ENST00000231021 CAPN15O75808 1086 aa6.22□□□□□ -1.41
CDH9-201ENST00000231021 CARNS1A5YM72 827 aa6.22□□□□□ -1.41
CDH9-201ENST00000231021 SPINK5Q9NQ38 1064 aaPredicted RBP6.21□□□□□ -1.42
CDH9-201ENST00000231021 DCAF1Q9Y4B6 1507 aa6.21□□□□□ -1.42
CDH9-201ENST00000231021 HS6ST3Q8IZP7 471 aa6.2□□□□□ -1.42
CDH9-201ENST00000231021 RETREG2Q8NC44 543 aa6.2□□□□□ -1.42
CDH9-201ENST00000231021 PRDM16Q9HAZ2 1276 aa6.2□□□□□ -1.42
CDH9-201ENST00000231021 FAM117AQ9C073 453 aa6.19□□□□□ -1.42
CDH9-201ENST00000231021 WDR70Q9NW82 654 aa6.19□□□□□ -1.42
CDH9-201ENST00000231021 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.19□□□□□ -1.42
CDH9-201ENST00000231021 GTPBP6O43824 516 aaPredicted RBP6.18□□□□□ -1.42
CDH9-201ENST00000231021 RNF25Q96BH1 459 aaPredicted RBP6.18□□□□□ -1.42
CDH9-201ENST00000231021 ARID4BQ4LE39 1312 aaPredicted RBP6.18□□□□□ -1.42
CDH9-201ENST00000231021 ZNF777Q9ULD5 760 aaPredicted RBP6.17□□□□□ -1.42
CDH9-201ENST00000231021 E9PSI1 815 aa6.16□□□□□ -1.42
CDH9-201ENST00000231021 SMARCA5O60264 1052 aaPredicted RBP6.16□□□□□ -1.42
CDH9-201ENST00000231021 UNCXA6NJT0 531 aa6.15□□□□□ -1.43
CDH9-201ENST00000231021 SEMA3EO15041 775 aa6.14□□□□□ -1.43
CDH9-201ENST00000231021 CCDC180Q9P1Z9 1646 aa6.14□□□□□ -1.43
CDH9-201ENST00000231021 CADPS2Q86UW7 1296 aa6.13□□□□□ -1.43
CDH9-201ENST00000231021 FBXW7Q969H0 707 aa6.13□□□□□ -1.43
CDH9-201ENST00000231021 MKRN4PQ13434 485 aaPredicted RBP6.12□□□□□ -1.43
CDH9-201ENST00000231021 RBM42Q9BTD8 480 aaKnown RBP6.12□□□□□ -1.43
CDH9-201ENST00000231021 ANO8Q9HCE9 1232 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms