RNA–Protein interactions for RNA: ENST00000218004.5

NXT2-201, Transcript of nuclear transport factor 2 like export factor 2, humanhuman

TSL 1 (best) BASIC

Gene NXT2, Length 2,692 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT2-201ENST00000218004 RBM10P98175 930 aaKnown RBP7.43□□□□□ -1.22
NXT2-201ENST00000218004 TMEM132AQ24JP5 1023 aa7.43□□□□□ -1.22
NXT2-201ENST00000218004 BCCIPQ9P287 314 aaKnown RBP eCLIP7.43□□□□□ -1.22
NXT2-201ENST00000218004 ZMYND15Q9H091 742 aa7.41□□□□□ -1.22
NXT2-201ENST00000218004 RNF216Q9NWF9 866 aaPredicted RBP7.4□□□□□ -1.22
NXT2-201ENST00000218004 NAP1L5Q96NT1 182 aaPredicted RBP7.4□□□□□ -1.23
NXT2-201ENST00000218004 DEKP35659 375 aaKnown RBP7.39□□□□□ -1.23
NXT2-201ENST00000218004 PCGF6Q9BYE7 350 aa7.38□□□□□ -1.23
NXT2-201ENST00000218004 ZCCHC6Q5VYS8 1495 aaKnown RBP7.38□□□□□ -1.23
NXT2-201ENST00000218004 EIF4G1Q04637 1599 aaKnown RBP7.38□□□□□ -1.23
NXT2-201ENST00000218004 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
NXT2-201ENST00000218004 PAXIP1Q6ZW49 1069 aaPredicted RBP7.36□□□□□ -1.23
NXT2-201ENST00000218004 HMGB1P09429 215 aaKnown RBP7.36□□□□□ -1.23
NXT2-201ENST00000218004 SHROOM4Q9ULL8 1493 aa7.36□□□□□ -1.23
NXT2-201ENST00000218004 PLCB2Q00722 1185 aa7.34□□□□□ -1.24
NXT2-201ENST00000218004 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.33□□□□□ -1.24
NXT2-201ENST00000218004 DCAF1Q9Y4B6 1507 aa7.32□□□□□ -1.24
NXT2-201ENST00000218004 DNAJC5Q9H3Z4 198 aa7.32□□□□□ -1.24
NXT2-201ENST00000218004 DCAF8L1A6NGE4 600 aa7.3□□□□□ -1.24
NXT2-201ENST00000218004 VSIG10Q8N0Z9 540 aa7.29□□□□□ -1.24
NXT2-201ENST00000218004 NPM3O75607 178 aaKnown RBP7.25□□□□□ -1.25
NXT2-201ENST00000218004 NAP1L2Q9ULW6 460 aaPredicted RBP7.25□□□□□ -1.25
NXT2-201ENST00000218004 SUPT5HO00267 1087 aaKnown RBP7.24□□□□□ -1.25
NXT2-201ENST00000218004 UBTFP17480 764 aaKnown RBP7.24□□□□□ -1.25
NXT2-201ENST00000218004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.24□□□□□ -1.25
NXT2-201ENST00000218004 POLR3GLQ9BT43 218 aa7.24□□□□□ -1.25
NXT2-201ENST00000218004 CCDC9Q9Y3X0 531 aaKnown RBP7.24□□□□□ -1.25
NXT2-201ENST00000218004 IPO4Q8TEX9 1081 aaKnown RBP7.23□□□□□ -1.25
NXT2-201ENST00000218004 TEX2Q8IWB9 1127 aa7.22□□□□□ -1.25
NXT2-201ENST00000218004 RNF39Q9H2S5 420 aa7.22□□□□□ -1.25
NXT2-201ENST00000218004 IGSF3O75054 1194 aa7.21□□□□□ -1.25
NXT2-201ENST00000218004 CHRM1P11229 460 aaPredicted RBP7.21□□□□□ -1.26
NXT2-201ENST00000218004 ERCC6Q03468 1493 aa7.2□□□□□ -1.26
NXT2-201ENST00000218004 TICAM2Q86XR7 235 aa7.19□□□□□ -1.26
NXT2-201ENST00000218004 PUS7Q96PZ0 661 aaKnown RBP7.19□□□□□ -1.26
NXT2-201ENST00000218004 NCLP19338 710 aaKnown RBP7.19□□□□□ -1.26
NXT2-201ENST00000218004 ARID3AQ99856 593 aa7.18□□□□□ -1.26
NXT2-201ENST00000218004 ZFP91Q96JP5 570 aaPredicted RBP7.18□□□□□ -1.26
NXT2-201ENST00000218004 IRX6P78412 446 aaPredicted RBP7.17□□□□□ -1.26
NXT2-201ENST00000218004 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.17□□□□□ -1.26
NXT2-201ENST00000218004 CACNB1Q02641 598 aaPredicted RBP7.16□□□□□ -1.26
NXT2-201ENST00000218004 CLSTN1O94985 981 aa7.15□□□□□ -1.26
NXT2-201ENST00000218004 YTHDC1Q96MU7 727 aaKnown RBP7.15□□□□□ -1.26
NXT2-201ENST00000218004 FANCIQ9NVI1 1328 aa7.15□□□□□ -1.27
NXT2-201ENST00000218004 SUPT16HQ9Y5B9 1047 aaKnown RBP7.14□□□□□ -1.27
NXT2-201ENST00000218004 FTSJ3Q8IY81 847 aaKnown RBP7.14□□□□□ -1.27
NXT2-201ENST00000218004 CUX2O14529 1486 aa7.13□□□□□ -1.27
NXT2-201ENST00000218004 IL27Q8NEV9 243 aa7.13□□□□□ -1.27
NXT2-201ENST00000218004 CHMP4BQ9H444 224 aaKnown RBP7.13□□□□□ -1.27
NXT2-201ENST00000218004 BBXQ8WY36 941 aaPredicted RBP7.13□□□□□ -1.27
NXT2-201ENST00000218004 CNPY4Q8N129 248 aa7.12□□□□□ -1.27
NXT2-201ENST00000218004 SECISBP2LQ93073 1101 aaKnown RBP7.11□□□□□ -1.27
NXT2-201ENST00000218004 ARID4BQ4LE39 1312 aaPredicted RBP7.11□□□□□ -1.27
NXT2-201ENST00000218004 POTEHQ6S545 545 aa7.11□□□□□ -1.27
NXT2-201ENST00000218004 RBM19Q9Y4C8 960 aaKnown RBP7.11□□□□□ -1.27
NXT2-201ENST00000218004 C11orf95C9JLR9 678 aaPredicted RBP7.1□□□□□ -1.27
NXT2-201ENST00000218004 BRPF3Q9ULD4 1205 aa7.1□□□□□ -1.27
NXT2-201ENST00000218004 RRP9O43818 475 aaKnown RBP7.09□□□□□ -1.27
NXT2-201ENST00000218004 CANXP27824 592 aaKnown RBP7.09□□□□□ -1.27
NXT2-201ENST00000218004 GTF2E1P29083 439 aaPredicted RBP7.09□□□□□ -1.27
NXT2-201ENST00000218004 DIEXFQ68CQ4 756 aaKnown RBP7.09□□□□□ -1.27
NXT2-201ENST00000218004 C1QBPQ07021 282 aaKnown RBP7.09□□□□□ -1.27
NXT2-201ENST00000218004 NESP48681 1621 aa7.08□□□□□ -1.28
NXT2-201ENST00000218004 CNGB1Q14028 1251 aaPredicted RBP7.08□□□□□ -1.28
NXT2-201ENST00000218004 CFAP44Q96MT7 982 aa7.08□□□□□ -1.28
NXT2-201ENST00000218004 ZNF592Q92610 1267 aa7.08□□□□□ -1.28
NXT2-201ENST00000218004 NCAPD3P42695 1498 aa7.07□□□□□ -1.28
NXT2-201ENST00000218004 TRIM41Q8WV44 630 aa7.07□□□□□ -1.28
NXT2-201ENST00000218004 ATAD2BQ9ULI0 1458 aa7.07□□□□□ -1.28
NXT2-201ENST00000218004 GRIPAP1Q4V328 841 aa7.06□□□□□ -1.28
NXT2-201ENST00000218004 RTL5Q5HYW3 569 aaPredicted RBP7.06□□□□□ -1.28
NXT2-201ENST00000218004 NPM1P06748 294 aaKnown RBP eCLIP7.05□□□□□ -1.28
NXT2-201ENST00000218004 PSMD1Q99460 953 aa7.05□□□□□ -1.28
NXT2-201ENST00000218004 CCER1Q8TC90 406 aaPredicted RBP7.04□□□□□ -1.28
NXT2-201ENST00000218004 PLCD4Q9BRC7 762 aa7.04□□□□□ -1.28
NXT2-201ENST00000218004 PTMAP06454 111 aaKnown RBP7.04□□□□□ -1.28
NXT2-201ENST00000218004 STAC3Q96MF2 364 aa7.04□□□□□ -1.28
NXT2-201ENST00000218004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.04□□□□□ -1.28
NXT2-201ENST00000218004 PRDM10Q9NQV6 1147 aa7.04□□□□□ -1.28
NXT2-201ENST00000218004 SMARCA2P51531 1590 aa7.04□□□□□ -1.28
NXT2-201ENST00000218004 VGFO15240 615 aaPredicted RBP7.04□□□□□ -1.28
NXT2-201ENST00000218004 CALD1Q05682 793 aaKnown RBP7.04□□□□□ -1.28
NXT2-201ENST00000218004 WWC1Q8IX03 1113 aa7.04□□□□□ -1.28
NXT2-201ENST00000218004 NEFMP07197 916 aa7.03□□□□□ -1.28
NXT2-201ENST00000218004 MCCP23508 829 aa7.03□□□□□ -1.28
NXT2-201ENST00000218004 PTMSP20962 102 aa7.03□□□□□ -1.28
NXT2-201ENST00000218004 BAZ1BQ9UIG0 1483 aaKnown RBP7.02□□□□□ -1.28
NXT2-201ENST00000218004 SMARCA4P51532 1647 aa7.02□□□□□ -1.29
NXT2-201ENST00000218004 HSP90AA2PQ14568 343 aaPredicted RBP7.02□□□□□ -1.29
NXT2-201ENST00000218004 SETQ01105 290 aaPredicted RBP7.01□□□□□ -1.29
NXT2-201ENST00000218004 TMED8Q6PL24 325 aaPredicted RBP7.01□□□□□ -1.29
NXT2-201ENST00000218004 PRDM4Q9UKN5 801 aa7.01□□□□□ -1.29
NXT2-201ENST00000218004 HMGXB3Q12766 1538 aa7.01□□□□□ -1.29
NXT2-201ENST00000218004 CENPJQ9HC77 1338 aaPredicted RBP6.99□□□□□ -1.29
NXT2-201ENST00000218004 KCNG1Q9UIX4 513 aa6.99□□□□□ -1.29
NXT2-201ENST00000218004 PPM1GO15355 546 aaPredicted RBP6.98□□□□□ -1.29
NXT2-201ENST00000218004 CC2D2BQ6DHV5 1058 aa6.98□□□□□ -1.29
NXT2-201ENST00000218004 CLGNO14967 610 aa6.97□□□□□ -1.29
NXT2-201ENST00000218004 KDM2AQ9Y2K7 1162 aa6.97□□□□□ -1.29
NXT2-201ENST00000218004 BAZ1AQ9NRL2 1556 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms