RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
VSIG1-201ENST00000217957 BICRAQ9NZM4 1560 aa13.84□□□□□ -0.19
VSIG1-201ENST00000217957 LMOD2Q6P5Q4 547 aa13.83□□□□□ -0.19
VSIG1-201ENST00000217957 ZBTB7CA1YPR0 619 aa13.77□□□□□ -0.21
VSIG1-201ENST00000217957 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
VSIG1-201ENST00000217957 ZMYND15Q9H091 742 aa13.75□□□□□ -0.21
VSIG1-201ENST00000217957 SLC24A3Q9HC58 644 aa13.75□□□□□ -0.21
VSIG1-201ENST00000217957 CHMP4AQ9BY43 222 aa13.75□□□□□ -0.21
VSIG1-201ENST00000217957 RSPH6AQ9H0K4 717 aa13.73□□□□□ -0.21
VSIG1-201ENST00000217957 APBB1O00213 710 aa13.71□□□□□ -0.22
VSIG1-201ENST00000217957 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.22
VSIG1-201ENST00000217957 PDIA4P13667 645 aaKnown RBP13.7□□□□□ -0.22
VSIG1-201ENST00000217957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.69□□□□□ -0.22
VSIG1-201ENST00000217957 PROM2Q8N271 834 aa13.68□□□□□ -0.22
VSIG1-201ENST00000217957 CC2D2AQ9P2K1 1620 aa13.67□□□□□ -0.22
VSIG1-201ENST00000217957 KCTD17Q8N5Z5 321 aa13.65□□□□□ -0.22
VSIG1-201ENST00000217957 SPOCK2Q92563 424 aa13.65□□□□□ -0.22
VSIG1-201ENST00000217957 CDK11BP21127 795 aaKnown RBP13.64□□□□□ -0.23
VSIG1-201ENST00000217957 FOXD4L5Q5VV16 416 aaPredicted RBP13.64□□□□□ -0.23
VSIG1-201ENST00000217957 FOXD4L4Q8WXT5 416 aaPredicted RBP13.64□□□□□ -0.23
VSIG1-201ENST00000217957 CDK11AQ9UQ88 783 aaPredicted RBP13.64□□□□□ -0.23
VSIG1-201ENST00000217957 GPBP1L1Q9HC44 474 aaPredicted RBP13.64□□□□□ -0.23
VSIG1-201ENST00000217957 RAD21O60216 631 aa13.63□□□□□ -0.23
VSIG1-201ENST00000217957 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
VSIG1-201ENST00000217957 DHX37Q8IY37 1157 aaKnown RBP13.59□□□□□ -0.23
VSIG1-201ENST00000217957 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
VSIG1-201ENST00000217957 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
VSIG1-201ENST00000217957 MTMR7Q9Y216 660 aa13.57□□□□□ -0.24
VSIG1-201ENST00000217957 IL27Q8NEV9 243 aa13.56□□□□□ -0.24
VSIG1-201ENST00000217957 KCNV2Q8TDN2 545 aa13.56□□□□□ -0.24
VSIG1-201ENST00000217957 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
VSIG1-201ENST00000217957 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
VSIG1-201ENST00000217957 CIZ1Q9ULV3 898 aaPredicted RBP13.55□□□□□ -0.24
VSIG1-201ENST00000217957 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
VSIG1-201ENST00000217957 AEBP1Q8IUX7 1158 aa13.53□□□□□ -0.24
VSIG1-201ENST00000217957 RNF25Q96BH1 459 aaPredicted RBP13.51□□□□□ -0.25
VSIG1-201ENST00000217957 GTPBP6O43824 516 aaPredicted RBP13.5□□□□□ -0.25
VSIG1-201ENST00000217957 CCDC82Q8N4S0 544 aa13.5□□□□□ -0.25
VSIG1-201ENST00000217957 MKRN3Q13064 507 aaKnown RBP13.49□□□□□ -0.25
VSIG1-201ENST00000217957 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
VSIG1-201ENST00000217957 HS6ST3Q8IZP7 471 aa13.44□□□□□ -0.26
VSIG1-201ENST00000217957 RGS22Q8NE09 1264 aa13.39□□□□□ -0.27
VSIG1-201ENST00000217957 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
VSIG1-201ENST00000217957 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
VSIG1-201ENST00000217957 HSP90B1P14625 803 aaKnown RBP13.36□□□□□ -0.27
VSIG1-201ENST00000217957 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
VSIG1-201ENST00000217957 USP35Q9P2H5 1018 aa13.3□□□□□ -0.28
VSIG1-201ENST00000217957 CLUAP1Q96AJ1 413 aa13.3□□□□□ -0.28
VSIG1-201ENST00000217957 THOC2Q8NI27 1593 aaKnown RBP13.3□□□□□ -0.28
VSIG1-201ENST00000217957 SEMA3EO15041 775 aa13.29□□□□□ -0.28
VSIG1-201ENST00000217957 POLR3GLQ9BT43 218 aa13.29□□□□□ -0.28
VSIG1-201ENST00000217957 CADPS2Q86UW7 1296 aa13.27□□□□□ -0.29
VSIG1-201ENST00000217957 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
VSIG1-201ENST00000217957 WDR70Q9NW82 654 aa13.26□□□□□ -0.29
VSIG1-201ENST00000217957 MFAP1P55081 439 aaKnown RBP13.25□□□□□ -0.29
VSIG1-201ENST00000217957 GZF1Q9H116 711 aaPredicted RBP13.23□□□□□ -0.29
VSIG1-201ENST00000217957 TMCO4Q5TGY1 634 aa13.23□□□□□ -0.29
VSIG1-201ENST00000217957 STK25O00506 426 aa13.21□□□□□ -0.29
VSIG1-201ENST00000217957 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
VSIG1-201ENST00000217957 POLA2Q14181 598 aa13.17□□□□□ -0.3
VSIG1-201ENST00000217957 KDM4CQ9H3R0 1056 aa13.16□□□□□ -0.3
VSIG1-201ENST00000217957 PUS7Q96PZ0 661 aaKnown RBP13.16□□□□□ -0.3
VSIG1-201ENST00000217957 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
VSIG1-201ENST00000217957 MIER1Q8N108 512 aa13.13□□□□□ -0.31
VSIG1-201ENST00000217957 ZMYND10O75800 440 aa13.11□□□□□ -0.31
VSIG1-201ENST00000217957 HMGB1P09429 215 aaKnown RBP13.1□□□□□ -0.31
VSIG1-201ENST00000217957 RETREG2Q8NC44 543 aa13.1□□□□□ -0.31
VSIG1-201ENST00000217957 HMGXB3Q12766 1538 aa13.1□□□□□ -0.31
VSIG1-201ENST00000217957 ZNF777Q9ULD5 760 aaPredicted RBP13.09□□□□□ -0.31
VSIG1-201ENST00000217957 FAM117AQ9C073 453 aa13.09□□□□□ -0.31
VSIG1-201ENST00000217957 IRF5Q13568 498 aa13.08□□□□□ -0.32
VSIG1-201ENST00000217957 SMARCA2P51531 1590 aa13.08□□□□□ -0.32
VSIG1-201ENST00000217957 LAMC3Q9Y6N6 1575 aa13.08□□□□□ -0.32
VSIG1-201ENST00000217957 FAM177A1Q8N128 213 aaPredicted RBP13.05□□□□□ -0.32
VSIG1-201ENST00000217957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.32
VSIG1-201ENST00000217957 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
VSIG1-201ENST00000217957 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.32
VSIG1-201ENST00000217957 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
VSIG1-201ENST00000217957 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
VSIG1-201ENST00000217957 E9PSI1 815 aa12.99□□□□□ -0.33
VSIG1-201ENST00000217957 UBE2Q2Q8WVN8 375 aa12.99□□□□□ -0.33
VSIG1-201ENST00000217957 BRD2P25440 801 aaKnown RBP12.98□□□□□ -0.33
VSIG1-201ENST00000217957 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
VSIG1-201ENST00000217957 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
VSIG1-201ENST00000217957 TRAK2O60296 914 aa12.96□□□□□ -0.33
VSIG1-201ENST00000217957 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.34
VSIG1-201ENST00000217957 STK24Q9Y6E0 443 aa12.96□□□□□ -0.34
VSIG1-201ENST00000217957 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
VSIG1-201ENST00000217957 BAZ1AQ9NRL2 1556 aaPredicted RBP12.95□□□□□ -0.34
VSIG1-201ENST00000217957 CWC22Q9HCG8 908 aaKnown RBP12.95□□□□□ -0.34
VSIG1-201ENST00000217957 NCAPD3P42695 1498 aa12.93□□□□□ -0.34
VSIG1-201ENST00000217957 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
VSIG1-201ENST00000217957 IRX6P78412 446 aaPredicted RBP12.92□□□□□ -0.34
VSIG1-201ENST00000217957 ERCC6L2Q5T890 1561 aa12.92□□□□□ -0.34
VSIG1-201ENST00000217957 CARNS1A5YM72 827 aa12.91□□□□□ -0.34
VSIG1-201ENST00000217957 WDR62O43379 1518 aa12.91□□□□□ -0.34
VSIG1-201ENST00000217957 WDR97A6NE52 1622 aa12.9□□□□□ -0.34
VSIG1-201ENST00000217957 POM121Q96HA1 1249 aa12.9□□□□□ -0.34
VSIG1-201ENST00000217957 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.35
VSIG1-201ENST00000217957 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms