RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 BAZ1AQ9NRL2 1556 aaPredicted RBP6.01□□□□□ -1.45
CFTR-201ENST00000003084 ESF1Q9H501 851 aaKnown RBP5.99□□□□□ -1.45
CFTR-201ENST00000003084 CHMP7Q8WUX9 453 aaPredicted RBP5.99□□□□□ -1.45
CFTR-201ENST00000003084 P3H3Q8IVL6 736 aa5.98□□□□□ -1.45
CFTR-201ENST00000003084 EEA1Q15075 1411 aa5.98□□□□□ -1.45
CFTR-201ENST00000003084 MYO15BQ96JP2 1530 aa5.98□□□□□ -1.45
CFTR-201ENST00000003084 ERCC6Q03468 1493 aa5.98□□□□□ -1.45
CFTR-201ENST00000003084 ZNF316A6NFI3 1004 aaPredicted RBP5.98□□□□□ -1.45
CFTR-201ENST00000003084 RSF1Q96T23 1441 aaPredicted RBP5.97□□□□□ -1.45
CFTR-201ENST00000003084 YTHDC1Q96MU7 727 aaKnown RBP5.97□□□□□ -1.45
CFTR-201ENST00000003084 HRCP23327 699 aa5.96□□□□□ -1.46
CFTR-201ENST00000003084 ZNF777Q9ULD5 760 aaPredicted RBP5.96□□□□□ -1.46
CFTR-201ENST00000003084 PRR29P0C7W0 189 aa5.96□□□□□ -1.46
CFTR-201ENST00000003084 SMARCA2P51531 1590 aa5.95□□□□□ -1.46
CFTR-201ENST00000003084 BCANQ96GW7 911 aa5.95□□□□□ -1.46
CFTR-201ENST00000003084 ACIN1Q9UKV3 1341 aaKnown RBP5.95□□□□□ -1.46
CFTR-201ENST00000003084 NEUROD1Q13562 356 aa5.94□□□□□ -1.46
CFTR-201ENST00000003084 CHGAP10645 457 aaKnown RBP5.94□□□□□ -1.46
CFTR-201ENST00000003084 PAXIP1Q6ZW49 1069 aaPredicted RBP5.94□□□□□ -1.46
CFTR-201ENST00000003084 DMRT2Q9Y5R5 561 aa5.93□□□□□ -1.46
CFTR-201ENST00000003084 ARID3CA6NKF2 412 aa5.93□□□□□ -1.46
CFTR-201ENST00000003084 WRNQ14191 1432 aaPredicted RBP eCLIP5.92□□□□□ -1.46
CFTR-201ENST00000003084 KIF27Q86VH2 1401 aa5.92□□□□□ -1.46
CFTR-201ENST00000003084 TSPYL2Q9H2G4 693 aaPredicted RBP5.92□□□□□ -1.46
CFTR-201ENST00000003084 STAG3Q9UJ98 1225 aa5.92□□□□□ -1.46
CFTR-201ENST00000003084 GOLGA3Q08378 1498 aa5.91□□□□□ -1.46
CFTR-201ENST00000003084 DAXXQ9UER7 740 aaPredicted RBP5.91□□□□□ -1.46
CFTR-201ENST00000003084 ZNF326Q5BKZ1 582 aaKnown RBP5.91□□□□□ -1.46
CFTR-201ENST00000003084 NEFMP07197 916 aa5.9□□□□□ -1.47
CFTR-201ENST00000003084 PDS5BQ9NTI5 1447 aa5.89□□□□□ -1.47
CFTR-201ENST00000003084 ANP32CO43423 234 aa5.89□□□□□ -1.47
CFTR-201ENST00000003084 MTUS2Q5JR59 1369 aa5.88□□□□□ -1.47
CFTR-201ENST00000003084 TSPY4P0CV99 314 aa5.88□□□□□ -1.47
CFTR-201ENST00000003084 TSPY10P0CW01 314 aa5.88□□□□□ -1.47
CFTR-201ENST00000003084 CLIP1P30622 1438 aa5.87□□□□□ -1.47
CFTR-201ENST00000003084 CEP164Q9UPV0 1460 aa5.87□□□□□ -1.47
CFTR-201ENST00000003084 PLEKHD1A6NEE1 506 aa5.87□□□□□ -1.47
CFTR-201ENST00000003084 KCNH8Q96L42 1107 aa5.87□□□□□ -1.47
CFTR-201ENST00000003084 CNGB1Q14028 1251 aaPredicted RBP5.87□□□□□ -1.47
CFTR-201ENST00000003084 FAM212AQ96EL1 285 aa5.87□□□□□ -1.47
CFTR-201ENST00000003084 DIEXFQ68CQ4 756 aaKnown RBP5.86□□□□□ -1.47
CFTR-201ENST00000003084 TONSLQ96HA7 1378 aa5.84□□□□□ -1.47
CFTR-201ENST00000003084 RBM42Q9BTD8 480 aaKnown RBP5.84□□□□□ -1.47
CFTR-201ENST00000003084 CECR2Q9BXF3 1484 aa5.84□□□□□ -1.47
CFTR-201ENST00000003084 TOP2AP11388 1531 aaKnown RBP5.84□□□□□ -1.47
CFTR-201ENST00000003084 STK24Q9Y6E0 443 aa5.83□□□□□ -1.48
CFTR-201ENST00000003084 STK25O00506 426 aa5.82□□□□□ -1.48
CFTR-201ENST00000003084 TNIKQ9UKE5 1360 aa5.82□□□□□ -1.48
CFTR-201ENST00000003084 CCDC88BA6NC98 1476 aa5.81□□□□□ -1.48
CFTR-201ENST00000003084 CLSPNQ9HAW4 1339 aa5.81□□□□□ -1.48
CFTR-201ENST00000003084 RNF40O75150 1001 aa5.81□□□□□ -1.48
CFTR-201ENST00000003084 FHAD1B1AJZ9 1412 aa5.81□□□□□ -1.48
CFTR-201ENST00000003084 MROH2BQ7Z745 1585 aa5.81□□□□□ -1.48
CFTR-201ENST00000003084 CUX2O14529 1486 aa5.8□□□□□ -1.48
CFTR-201ENST00000003084 EIF4G1Q04637 1599 aaKnown RBP5.8□□□□□ -1.48
CFTR-201ENST00000003084 CEP162Q5TB80 1403 aa5.8□□□□□ -1.48
CFTR-201ENST00000003084 CARMIL2Q6F5E8 1435 aa5.8□□□□□ -1.48
CFTR-201ENST00000003084 CARMIL1Q5VZK9 1371 aa5.79□□□□□ -1.48
CFTR-201ENST00000003084 CANXP27824 592 aaKnown RBP5.79□□□□□ -1.48
CFTR-201ENST00000003084 CHIC2Q9UKJ5 165 aa5.79□□□□□ -1.48
CFTR-201ENST00000003084 SPOCK2Q92563 424 aa5.79□□□□□ -1.48
CFTR-201ENST00000003084 ABCC8Q09428 1581 aa5.79□□□□□ -1.48
CFTR-201ENST00000003084 SPDYE1Q8NFV5 336 aaPredicted RBP5.78□□□□□ -1.48
CFTR-201ENST00000003084 SMARCA4P51532 1647 aa5.78□□□□□ -1.48
CFTR-201ENST00000003084 SOGA1O94964 1423 aa5.78□□□□□ -1.48
CFTR-201ENST00000003084 CADPSQ9ULU8 1353 aa5.78□□□□□ -1.48
CFTR-201ENST00000003084 RTN4Q9NQC3 1192 aaKnown RBP5.78□□□□□ -1.48
CFTR-201ENST00000003084 CFDP1Q9UEE9 299 aaPredicted RBP5.77□□□□□ -1.49
CFTR-201ENST00000003084 SEC24BO95487 1268 aa5.77□□□□□ -1.49
CFTR-201ENST00000003084 SLC4A3P48751 1232 aa5.77□□□□□ -1.49
CFTR-201ENST00000003084 PPP1R15AO75807 674 aaPredicted RBP5.77□□□□□ -1.49
CFTR-201ENST00000003084 ATAD2BQ9ULI0 1458 aa5.76□□□□□ -1.49
CFTR-201ENST00000003084 ARID4BQ4LE39 1312 aaPredicted RBP5.76□□□□□ -1.49
CFTR-201ENST00000003084 CCNB3Q8WWL7 1395 aa5.76□□□□□ -1.49
CFTR-201ENST00000003084 MKRN3Q13064 507 aaKnown RBP5.75□□□□□ -1.49
CFTR-201ENST00000003084 KANK1Q14678 1352 aa5.75□□□□□ -1.49
CFTR-201ENST00000003084 GOLGA8CPA6NN73 597 aa5.75□□□□□ -1.49
CFTR-201ENST00000003084 OSCARQ8IYS5 282 aa5.75□□□□□ -1.49
CFTR-201ENST00000003084 TSC1Q92574 1164 aa5.74□□□□□ -1.49
CFTR-201ENST00000003084 MYT1Q01538 1121 aa5.74□□□□□ -1.49
CFTR-201ENST00000003084 WIZO95785 1651 aa5.74□□□□□ -1.49
CFTR-201ENST00000003084 HDGFP51858 240 aaKnown RBP5.73□□□□□ -1.49
CFTR-201ENST00000003084 MAP10Q9P2G4 905 aa5.73□□□□□ -1.49
CFTR-201ENST00000003084 CDCA8Q53HL2 280 aa5.73□□□□□ -1.49
CFTR-201ENST00000003084 SPRYD3Q8NCJ5 442 aa5.73□□□□□ -1.49
CFTR-201ENST00000003084 RRP7BPQ9NSQ0 103 aa5.72□□□□□ -1.49
CFTR-201ENST00000003084 SPINK5Q9NQ38 1064 aaPredicted RBP5.72□□□□□ -1.49
CFTR-201ENST00000003084 HAX1O00165 279 aa5.72□□□□□ -1.49
CFTR-201ENST00000003084 FMN1Q68DA7 1419 aa5.72□□□□□ -1.49
CFTR-201ENST00000003084 ARID3AQ99856 593 aa5.71□□□□□ -1.49
CFTR-201ENST00000003084 ATF5Q9Y2D1 282 aaPredicted RBP5.71□□□□□ -1.5
CFTR-201ENST00000003084 ATXN8OSP0DMR3 200 aa5.71□□□□□ -1.5
CFTR-201ENST00000003084 FANCD2Q9BXW9 1451 aa5.71□□□□□ -1.5
CFTR-201ENST00000003084 KDM2AQ9Y2K7 1162 aa5.7□□□□□ -1.5
CFTR-201ENST00000003084 RAPGEF2Q9Y4G8 1499 aa5.7□□□□□ -1.5
CFTR-201ENST00000003084 WDR43Q15061 677 aaKnown RBP eCLIP5.7□□□□□ -1.5
CFTR-201ENST00000003084 ARHGAP35Q9NRY4 1499 aa5.7□□□□□ -1.5
CFTR-201ENST00000003084 VASPP50552 380 aaPredicted RBP5.7□□□□□ -1.5
CFTR-201ENST00000003084 C14orf37Q86TY3 774 aa5.69□□□□□ -1.5
CFTR-201ENST00000003084 RYDENQ9NUL5 291 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms