RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523		M0R3E3	92 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	OR7C2	O60412	319 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	PRM2	P04554	102 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	GPX1	P07203	203 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	PYY	P10082	97 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	CXCL6	P80162	114 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	IFITM3	Q01628	133 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	KHDC3L	Q587J8	217 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	FAM74A1	Q5RGS3	127 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	ZNRF2	Q8NHG8	242 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	SCGB1C1	Q8TD33	95 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	KCNS1	Q96KK3	526 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	UPK3B	Q9BT76	320 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	PAXX	Q9BUH6	204 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	SLC25A2	Q9BXI2	301 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	WDR61	Q9GZS3	305 aa	Known RBP	4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	PSG8	Q9UQ74	426 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	NACA	E9PAV3	2078 aa		4.24	□□□□□ -1.73
CASC19-238	ENST00000641523	TRGV1	A0A0A0MS02	117 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	MAP1LC3B2	A6NCE7	125 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	FGF6	P10767	208 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	RNASE4	P34096	147 aa	Known RBP	4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	UBE2L3	P68036	154 aa	Known RBP	4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	PPP1R1C	Q8WVI7	109 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	SAMD10	Q9BYL1	202 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	MAP1LC3B	Q9GZQ8	125 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	AGPAT4-IT1	Q9H0P7	198 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	ZNF492	Q9P255	531 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	LINC00588	Q9Y4M8	146 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	LENEP	Q9Y5L5	61 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523		A0A1B0GV90	55 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	ZNF324	O75467	553 aa	Predicted RBP	4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	AKR1C3	P42330	323 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	ERCC8	Q13216	396 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	BATF	Q16520	125 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523		Q6ZTI0	123 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	MIR17HG	Q75NE6	70 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	FAM19A3	Q7Z5A8	133 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	EXOC3-AS1	Q8N2X6	119 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	CMTM2	Q8TAZ6	248 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	FAM167A-AS1	Q96KT0	104 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	OR5AC2	Q9NZP5	309 aa		4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	MRPS16	Q9Y3D3	137 aa	Known RBP	4.23	□□□□□ -1.73
CASC19-238	ENST00000641523	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.22	□□□□□ -1.73
CASC19-238	ENST00000641523		A0A0J9YY99	117 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523		A0A1W2PRE2	83 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523		K7EP13	123 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	SPINK4	O60575	86 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	SIX6	O95475	246 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	MPC2	O95563	127 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	IGKV2D-40	P01614	121 aa	Predicted RBP	4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	C1QB	P02746	253 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	RPL23	P62829	140 aa	Known RBP	4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	BTN1A1	Q13410	526 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	COA6	Q5JTJ3	125 aa	Known RBP	4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	C2orf66	Q6UXQ4	117 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523		Q6ZRU5	148 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	ZFAND2A	Q8N6M9	145 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	PRO0255	Q9UI72	69 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	ICOS	Q9Y6W8	199 aa		4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	DYNC1H1	Q14204	4646 aa	Known RBP	4.22	□□□□□ -1.73
CASC19-238	ENST00000641523	C16orf90	A8MZG2	172 aa		4.21	□□□□□ -1.74
CASC19-238	ENST00000641523	PRB4	P10163	310 aa	Predicted RBP	4.21	□□□□□ -1.74
CASC19-238	ENST00000641523	DDT	P30046	118 aa		4.21	□□□□□ -1.74
CASC19-238	ENST00000641523	GNG5	P63218	68 aa		4.21	□□□□□ -1.74
CASC19-238	ENST00000641523	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.21	□□□□□ -1.74
CASC19-238	ENST00000641523	ATP5L2	Q7Z4Y8	100 aa		4.21	□□□□□ -1.74
CASC19-238	ENST00000641523	PHYHIPL	Q96FC7	376 aa		4.21	□□□□□ -1.74
CASC19-238	ENST00000641523	VSIG2	Q96IQ7	327 aa		4.21	□□□□□ -1.74
CASC19-238	ENST00000641523	OTOR	Q9NRC9	128 aa		4.21	□□□□□ -1.74
CASC19-238	ENST00000641523	IGLV8-61	A0A075B6I0	122 aa		4.2	□□□□□ -1.74
CASC19-238	ENST00000641523	PEX7	O00628	323 aa		4.2	□□□□□ -1.74
CASC19-238	ENST00000641523	HMGB3	O15347	200 aa	Known RBP	4.2	□□□□□ -1.74
CASC19-238	ENST00000641523	ESRG	Q1W209	222 aa		4.2	□□□□□ -1.74
CASC19-238	ENST00000641523		Q6AWC8	147 aa		4.2	□□□□□ -1.74
CASC19-238	ENST00000641523	GOLT1A	Q6ZVE7	132 aa		4.2	□□□□□ -1.74
CASC19-238	ENST00000641523	SH2D6	Q7Z4S9	175 aa		4.2	□□□□□ -1.74
CASC19-238	ENST00000641523	NDFIP1	Q9BT67	221 aa		4.2	□□□□□ -1.74
CASC19-238	ENST00000641523	TP53TG3	Q9ULZ0	132 aa		4.2	□□□□□ -1.74
CASC19-238	ENST00000641523	ABCA13	Q86UQ4	5058 aa		4.2	□□□□□ -1.74
CASC19-238	ENST00000641523		A0A096LPF7	62 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	TRAV21	A0A0B4J279	112 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	TRGV4	A0A0C4DH28	118 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	SRI	P30626	198 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	TDRG1	Q3Y452	100 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	AKR1C8P	Q5T2L2	129 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	OR10G4	Q8NGN3	311 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523		Q8TAT8	98 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	DNAJC30	Q96LL9	226 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	HYLS1	Q96M11	299 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	TXNDC17	Q9BRA2	123 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	KRTAP2-2	Q9BYT5	123 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	MRPL16	Q9NX20	251 aa	Known RBP	4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	HHLA3	Q9XRX5	114 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	PKD1	P98161	4303 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523		A0A0J9YXY3	114 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523		C9JCJ5	164 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	NDUFC2-KCTD14	E9PQ53	114 aa		4.19	□□□□□ -1.74
CASC19-238	ENST00000641523	MP68	P56378	58 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms