RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 TRAV12-2A0A075B6T6 113 aa11.13□□□□□ -0.63
PAX6-277ENST00000640735 A0A1B0GV72 72 aa11.13□□□□□ -0.63
PAX6-277ENST00000640735 RHOHQ15669 191 aa11.13□□□□□ -0.63
PAX6-277ENST00000640735 GAGE13Q4V321 117 aa11.13□□□□□ -0.63
PAX6-277ENST00000640735 C11orf86A6NJI1 115 aa11.13□□□□□ -0.63
PAX6-277ENST00000640735 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
PAX6-277ENST00000640735 Q8N2B8 174 aa11.13□□□□□ -0.63
PAX6-277ENST00000640735 TRGV11A0A075B6L2 103 aa11.12□□□□□ -0.63
PAX6-277ENST00000640735 RPL13AP40429 203 aaKnown RBP11.12□□□□□ -0.63
PAX6-277ENST00000640735 SPINK13Q1W4C9 94 aa11.12□□□□□ -0.63
PAX6-277ENST00000640735 NSUN5P1Q3KNT7 163 aa11.12□□□□□ -0.63
PAX6-277ENST00000640735 EDA2RQ9HAV5 297 aa11.12□□□□□ -0.63
PAX6-277ENST00000640735 TRAV2A0A0B4J234 112 aa11.12□□□□□ -0.63
PAX6-277ENST00000640735 TRPT1Q86TN4 253 aaKnown RBP11.12□□□□□ -0.63
PAX6-277ENST00000640735 HIVEP2P31629 2446 aa11.11□□□□□ -0.63
PAX6-277ENST00000640735 CRLF1O75462 422 aa11.11□□□□□ -0.63
PAX6-277ENST00000640735 IGKV3-20P01619 116 aa11.11□□□□□ -0.63
PAX6-277ENST00000640735 ZNF876PQ49A33 203 aa11.11□□□□□ -0.63
PAX6-277ENST00000640735 RPL39P62891 51 aaKnown RBP11.1□□□□□ -0.63
PAX6-277ENST00000640735 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
PAX6-277ENST00000640735 ZNF815PA8K554 130 aa11.1□□□□□ -0.63
PAX6-277ENST00000640735 HERVK_113P61574 105 aa11.1□□□□□ -0.63
PAX6-277ENST00000640735 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
PAX6-277ENST00000640735 SONP18583 2426 aaKnown RBP11.09□□□□□ -0.63
PAX6-277ENST00000640735 NSD1Q96L73 2696 aaPredicted RBP11.09□□□□□ -0.63
PAX6-277ENST00000640735 G3V4G9 280 aa11.09□□□□□ -0.63
PAX6-277ENST00000640735 NFE4Q86UQ8 179 aa11.09□□□□□ -0.63
PAX6-277ENST00000640735 ZNF56Q15929 161 aa11.08□□□□□ -0.63
PAX6-277ENST00000640735 FAM74A4Q5TZK3 123 aa11.08□□□□□ -0.63
PAX6-277ENST00000640735 VPS25Q9BRG1 176 aa11.08□□□□□ -0.63
PAX6-277ENST00000640735 RETNQ9HD89 108 aa11.08□□□□□ -0.63
PAX6-277ENST00000640735 PLA2G1BP04054 148 aaKnown RBP11.08□□□□□ -0.64
PAX6-277ENST00000640735 P0DMU3 169 aa11.08□□□□□ -0.64
PAX6-277ENST00000640735 FAM231AP0DMU4 169 aa11.08□□□□□ -0.64
PAX6-277ENST00000640735 FAM231CP0DMU5 169 aa11.08□□□□□ -0.64
PAX6-277ENST00000640735 PLEKHB2Q96CS7 222 aa11.08□□□□□ -0.64
PAX6-277ENST00000640735 MXRA5Q9NR99 2828 aa11.08□□□□□ -0.64
PAX6-277ENST00000640735 RBMY1A1P0DJD3 496 aaKnown RBP11.07□□□□□ -0.64
PAX6-277ENST00000640735 RBMY1CP0DJD4 496 aa11.07□□□□□ -0.64
PAX6-277ENST00000640735 RBMY1FQ15415 496 aaKnown RBP11.07□□□□□ -0.64
PAX6-277ENST00000640735 PIK3CD-AS1Q5SR53 167 aa11.07□□□□□ -0.64
PAX6-277ENST00000640735 I3L3M4 83 aa11.07□□□□□ -0.64
PAX6-277ENST00000640735 LINC00336Q6ZUF6 198 aa11.07□□□□□ -0.64
PAX6-277ENST00000640735 C20orf203Q8NBC4 194 aa11.07□□□□□ -0.64
PAX6-277ENST00000640735 ZNRF2Q8NHG8 242 aa11.07□□□□□ -0.64
PAX6-277ENST00000640735 A0A0J9YY99 117 aa11.06□□□□□ -0.64
PAX6-277ENST00000640735 UBE2D1P51668 147 aa11.06□□□□□ -0.64
PAX6-277ENST00000640735 CRYBA4P53673 196 aa11.06□□□□□ -0.64
PAX6-277ENST00000640735 SPANXB1Q9NS25 103 aaPredicted RBP11.06□□□□□ -0.64
PAX6-277ENST00000640735 H3BMM0 161 aa11.05□□□□□ -0.64
PAX6-277ENST00000640735 SLURP1P55000 103 aa11.05□□□□□ -0.64
PAX6-277ENST00000640735 KLHL30-AS1Q8NEE0 82 aa11.05□□□□□ -0.64
PAX6-277ENST00000640735 FN1P02751 2386 aaKnown RBP11.05□□□□□ -0.64
PAX6-277ENST00000640735 KNCNA6PVL3 124 aa11.05□□□□□ -0.64
PAX6-277ENST00000640735 F8W1H4 67 aa11.05□□□□□ -0.64
PAX6-277ENST00000640735 C18orf65Q6ZTR6 163 aa11.05□□□□□ -0.64
PAX6-277ENST00000640735 AMELXQ99217 191 aa11.05□□□□□ -0.64
PAX6-277ENST00000640735 LINC00467Q9BRT7 94 aa11.05□□□□□ -0.64
PAX6-277ENST00000640735 TEP1Q99973 2627 aaKnown RBP11.05□□□□□ -0.64
PAX6-277ENST00000640735 DEFB131AP59861 70 aa11.04□□□□□ -0.64
PAX6-277ENST00000640735 SCGB1D4Q6XE38 83 aa11.04□□□□□ -0.64
PAX6-277ENST00000640735 RBMY1BA6NDE4 496 aaKnown RBP11.04□□□□□ -0.64
PAX6-277ENST00000640735 RBMY1EA6NEQ0 496 aaKnown RBP11.04□□□□□ -0.64
PAX6-277ENST00000640735 RBMY1DP0C7P1 496 aaKnown RBP11.04□□□□□ -0.64
PAX6-277ENST00000640735 ZNF418Q8TF45 676 aaPredicted RBP11.04□□□□□ -0.64
PAX6-277ENST00000640735 C4orf3Q8WVX3 66 aa11.04□□□□□ -0.64
PAX6-277ENST00000640735 F5H768 121 aa11.03□□□□□ -0.64
PAX6-277ENST00000640735 EMP1P54849 157 aa11.03□□□□□ -0.64
PAX6-277ENST00000640735 TSPEAR-AS2P59090 65 aa11.03□□□□□ -0.64
PAX6-277ENST00000640735 SLC25A29Q8N8R3 303 aa11.03□□□□□ -0.64
PAX6-277ENST00000640735 DEFB104AQ8WTQ1 72 aa11.03□□□□□ -0.64
PAX6-277ENST00000640735 MTORP42345 2549 aa11.03□□□□□ -0.64
PAX6-277ENST00000640735 GAGE2BQ13066 116 aa11.02□□□□□ -0.64
PAX6-277ENST00000640735 GAGE2EQ4V326 116 aa11.02□□□□□ -0.64
PAX6-277ENST00000640735 GAGE2AQ6NT46 116 aa11.02□□□□□ -0.64
PAX6-277ENST00000640735 GAGE2DQ9UEU5 116 aa11.02□□□□□ -0.64
PAX6-277ENST00000640735 PYGO1Q9Y3Y4 419 aa11.02□□□□□ -0.64
PAX6-277ENST00000640735 SORL1Q92673 2214 aa11.02□□□□□ -0.65
PAX6-277ENST00000640735 TMEM223A0PJW6 202 aa11.02□□□□□ -0.65
PAX6-277ENST00000640735 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.65
PAX6-277ENST00000640735 DNAJC9-AS1A6NH13 148 aa11.01□□□□□ -0.65
PAX6-277ENST00000640735 A8MWV9 139 aa11.01□□□□□ -0.65
PAX6-277ENST00000640735 M0R2P5 195 aa11.01□□□□□ -0.65
PAX6-277ENST00000640735 LEPROTO15243 131 aa11.01□□□□□ -0.65
PAX6-277ENST00000640735 SRSF9Q13242 221 aaKnown RBP eCLIP11.01□□□□□ -0.65
PAX6-277ENST00000640735 DEFB136Q30KP8 78 aa11.01□□□□□ -0.65
PAX6-277ENST00000640735 TMEM86BQ8N661 226 aa11.01□□□□□ -0.65
PAX6-277ENST00000640735 DLX4Q92988 240 aaPredicted RBP11.01□□□□□ -0.65
PAX6-277ENST00000640735 ESM1Q9NQ30 184 aa11.01□□□□□ -0.65
PAX6-277ENST00000640735 PRO0461Q9UI25 63 aa11.01□□□□□ -0.65
PAX6-277ENST00000640735 CUBNO60494 3623 aa11.01□□□□□ -0.65
PAX6-277ENST00000640735 IGLV4-3A0A075B6K6 122 aa11□□□□□ -0.65
PAX6-277ENST00000640735 J3QQQ9 107 aa11□□□□□ -0.65
PAX6-277ENST00000640735 HILS1P60008 231 aa11□□□□□ -0.65
PAX6-277ENST00000640735 TMEM61Q8N0U2 210 aa11□□□□□ -0.65
PAX6-277ENST00000640735 OPRPNQ99935 248 aaPredicted RBP11□□□□□ -0.65
PAX6-277ENST00000640735 IGHV3-30P01768 117 aa11□□□□□ -0.65
PAX6-277ENST00000640735 IGHV3-30-5P0DP03 117 aa11□□□□□ -0.65
PAX6-277ENST00000640735 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
PAX6-277ENST00000640735 MAP6D1Q9H9H5 199 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms